Cow genome map
| Conread name: | Lym2-sn16_A03.f |
| Conread position: | 1-465 |
| Cow position: | chr19:4388250-4387784 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 110 |
| Conread position: | 1-465 |
| Cow position: | chr19:39393180-39392698 (view UCSC Genome Browser custom track) |
| Alignm length: | 484 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 9 |
| Conread position: | 2-410 |
| Cow position: | chr19:33649520-33649944 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 282, 23 |
| Conread position: | 2-464 |
| Cow position: | chr19:191235-190758 (view UCSC Genome Browser custom track) |
| Alignm length: | 488 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 60 |
| Conread position: | 2-465 |
| Cow position: | chr19:3088653-3089137 (view UCSC Genome Browser custom track) |
| Alignm length: | 487 |
| Alignm identity: | 358 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 130 |
| Conread position: | 2-465 |
| Cow position: | chr19:12775792-12775310 (view UCSC Genome Browser custom track) |
| Alignm length: | 484 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 429 |
| Conread position: | 4-410 |
| Cow position: | chr19:5732169-5731756 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 27 |
| Conread position: | 4-462 |
| Cow position: | chr19:41000-40547 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 154 |
| Conread position: | 4-465 |
| Cow position: | chr19:257977-257500 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 60 |
| Conread position: | 4-465 |
| Cow position: | chr19:7481270-7481747 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 369 |
| Conread position: | 4-465 |
| Cow position: | chr19:7490765-7490287 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 203 |
| Conread position: | 4-465 |
| Cow position: | chr19:15445198-15445674 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 219 |
| Conread position: | 4-465 |
| Cow position: | chr19:16317943-16318423 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 352 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 44 |
| Conread position: | 4-465 |
| Cow position: | chr19:20610999-20610518 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 4-465 |
| Cow position: | chr19:22511113-22511587 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 286, 26 |
| Conread position: | 4-465 |
| Cow position: | chr19:39182872-39183353 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 4-465 |
| Cow position: | chr19:40849820-40850299 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 248 |
| Conread position: | 5-465 |
| Cow position: | chr19:1586589-1587053 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 104 |
| Conread position: | 6-383 |
| Cow position: | chr19:44758132-44758514 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 39 |
| Conread position: | 6-465 |
| Cow position: | chr19:33876080-33875602 (view UCSC Genome Browser custom track) |
| Alignm length: | 480 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 208 |
| Conread position: | 6-465 |
| Cow position: | chr19:39665886-39666365 (view UCSC Genome Browser custom track) |
| Alignm length: | 484 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 201 |
| Conread position: | 8-470 |
| Cow position: | chr19:42581619-42582101 (view UCSC Genome Browser custom track) |
| Alignm length: | 494 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 190 |
| Conread position: | 25-465 |
| Cow position: | chr19:30757866-30757432 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 265, 118 |
| Conread position: | 26-358 |
| Cow position: | chr19:24727036-24727374 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 262, 137 |
| Conread position: | 31-465 |
| Cow position: | chr19:165484-165929 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 259, 167 |
| Conread position: | 44-465 |
| Cow position: | chr19:5248159-5248602 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 100-469 |
| Cow position: | chr19:28789450-28789824 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 272 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 17, 32 |
| Conread position: | 119-465 |
| Cow position: | chr19:2271567-2271929 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 256 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 169, 87 |
| Conread position: | 139-465 |
| Cow position: | chr19:5898977-5899319 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 247 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 149, 67 |
| Conread position: | 161-459 |
| Cow position: | chr19:29086172-29085857 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 220 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 47, 201 |
| Conread position: | 170-465 |
| Cow position: | chr19:343744-343438 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 209 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 110, 40 |
| Conread position: | 195-467 |
| Cow position: | chr19:174730-174447 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 189 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 203-418 |
| Cow position: | chr19:39690249-39690019 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 224-467 |
| Cow position: | chr19:3418304-3418044 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 178 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 60, 252 |
| Conread position: | 290-456 |
| Cow position: | chr19:30452984-30453158 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 127 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 58, 0 |
Show alignments to all cow chromosomes.