Cow genome map
| Conread name: | Lym2-sn16_A03.f |
| Conread position: | 1-358 |
| Cow position: | chr22:10933655-10934021 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 177 |
| Conread position: | 1-363 |
| Cow position: | chr22:11035859-11035497 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 174 |
| Conread position: | 1-363 |
| Cow position: | chr22:13775075-13774711 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 184 |
| Conread position: | 1-459 |
| Cow position: | chr22:21591995-21591521 (view UCSC Genome Browser custom track) |
| Alignm length: | 479 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 191 |
| Conread position: | 1-465 |
| Cow position: | chr22:11609212-11608730 (view UCSC Genome Browser custom track) |
| Alignm length: | 485 |
| Alignm identity: | 344 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 9 |
| Conread position: | 1-465 |
| Cow position: | chr22:28555597-28556080 (view UCSC Genome Browser custom track) |
| Alignm length: | 484 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 2-382 |
| Cow position: | chr22:10620835-10620441 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 136 |
| Conread position: | 2-421 |
| Cow position: | chr22:3297165-3297592 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 192 |
| Conread position: | 2-463 |
| Cow position: | chr22:841498-841017 (view UCSC Genome Browser custom track) |
| Alignm length: | 488 |
| Alignm identity: | 326 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 16, 116 |
| Conread position: | 2-464 |
| Cow position: | chr22:15871368-15870885 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 142 |
| Conread position: | 2-465 |
| Cow position: | chr22:2390970-2391445 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 356 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 118 |
| Conread position: | 2-465 |
| Cow position: | chr22:13208966-13208502 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 58 |
| Conread position: | 2-465 |
| Cow position: | chr22:36544385-36544862 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 86 |
| Conread position: | 3-383 |
| Cow position: | chr22:7279110-7278721 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 115 |
| Conread position: | 3-465 |
| Cow position: | chr22:94846-95325 (view UCSC Genome Browser custom track) |
| Alignm length: | 485 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 135, 18 |
| Conread position: | 3-465 |
| Cow position: | chr22:36585274-36585755 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 285, 0 |
| Conread position: | 3-465 |
| Cow position: | chr22:44605374-44605849 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 351 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 28 |
| Conread position: | 4-337 |
| Cow position: | chr22:34822575-34822908 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 239 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 14, 60 |
| Conread position: | 4-368 |
| Cow position: | chr22:1482981-1482606 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 115 |
| Conread position: | 4-369 |
| Cow position: | chr22:34604787-34604411 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 203 |
| Conread position: | 4-375 |
| Cow position: | chr22:3434397-3434763 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 220 |
| Conread position: | 4-383 |
| Cow position: | chr22:10907633-10908021 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 186 |
| Conread position: | 4-451 |
| Cow position: | chr22:39039411-39039872 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 226, 26 |
| Conread position: | 4-463 |
| Cow position: | chr22:6334378-6333905 (view UCSC Genome Browser custom track) |
| Alignm length: | 480 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 168 |
| Conread position: | 4-465 |
| Cow position: | chr22:558136-558615 (view UCSC Genome Browser custom track) |
| Alignm length: | 484 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 203 |
| Conread position: | 4-465 |
| Cow position: | chr22:980856-980377 (view UCSC Genome Browser custom track) |
| Alignm length: | 484 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 145 |
| Conread position: | 4-465 |
| Cow position: | chr22:1324694-1324224 (view UCSC Genome Browser custom track) |
| Alignm length: | 479 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 91 |
| Conread position: | 4-465 |
| Cow position: | chr22:1518461-1518941 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 183 |
| Conread position: | 4-465 |
| Cow position: | chr22:8132221-8132695 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 280, 26 |
| Conread position: | 4-465 |
| Cow position: | chr22:8735151-8735627 (view UCSC Genome Browser custom track) |
| Alignm length: | 480 |
| Alignm identity: | 355 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 107 |
| Conread position: | 4-465 |
| Cow position: | chr22:11802481-11802962 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 4-465 |
| Cow position: | chr22:13722175-13722645 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 72 |
| Conread position: | 4-465 |
| Cow position: | chr22:13767893-13767426 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 137 |
| Conread position: | 4-465 |
| Cow position: | chr22:18029842-18029361 (view UCSC Genome Browser custom track) |
| Alignm length: | 484 |
| Alignm identity: | 355 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 150 |
| Conread position: | 4-465 |
| Cow position: | chr22:18614842-18614373 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 159 |
| Conread position: | 4-465 |
| Cow position: | chr22:20238267-20238747 (view UCSC Genome Browser custom track) |
| Alignm length: | 484 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 203 |
| Conread position: | 4-465 |
| Cow position: | chr22:28784686-28784205 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 352 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 329 |
| Conread position: | 4-465 |
| Cow position: | chr22:29854422-29853946 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 203 |
| Conread position: | 4-465 |
| Cow position: | chr22:30676163-30676621 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 340, 26 |
| Conread position: | 4-465 |
| Cow position: | chr22:32205627-32205156 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 120 |
| Conread position: | 4-465 |
| Cow position: | chr22:34170909-34170428 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 4-465 |
| Cow position: | chr22:35669097-35669578 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 4-465 |
| Cow position: | chr22:37536907-37537386 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 66 |
| Conread position: | 4-465 |
| Cow position: | chr22:39466945-39467422 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 142 |
| Conread position: | 4-465 |
| Cow position: | chr22:40372975-40372498 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 130 |
| Conread position: | 4-465 |
| Cow position: | chr22:42993743-42993263 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 102 |
| Conread position: | 4-465 |
| Cow position: | chr22:44100774-44101241 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 134 |
| Conread position: | 4-465 |
| Cow position: | chr22:46579161-46579629 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 219, 31 |
| Conread position: | 4-467 |
| Cow position: | chr22:2562178-2562676 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 5-359 |
| Cow position: | chr22:30067901-30068270 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 212 |
| Conread position: | 5-465 |
| Cow position: | chr22:34596300-34595828 (view UCSC Genome Browser custom track) |
| Alignm length: | 484 |
| Alignm identity: | 319 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 30, 57 |
| Conread position: | 5-465 |
| Cow position: | chr22:43046799-43047266 (view UCSC Genome Browser custom track) |
| Alignm length: | 485 |
| Alignm identity: | 351 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 51 |
| Conread position: | 6-465 |
| Cow position: | chr22:29038236-29037766 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 112 |
| Conread position: | 6-465 |
| Cow position: | chr22:44366912-44367389 (view UCSC Genome Browser custom track) |
| Alignm length: | 478 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 6-465 |
| Cow position: | chr22:44399001-44398528 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 312 |
| Conread position: | 7-383 |
| Cow position: | chr22:50604-50213 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 204 |
| Conread position: | 7-462 |
| Cow position: | chr22:11780409-11780874 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 48 |
| Conread position: | 7-463 |
| Cow position: | chr22:17325917-17326390 (view UCSC Genome Browser custom track) |
| Alignm length: | 477 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 233 |
| Conread position: | 7-465 |
| Cow position: | chr22:27307402-27307878 (view UCSC Genome Browser custom track) |
| Alignm length: | 480 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 200 |
| Conread position: | 9-465 |
| Cow position: | chr22:23799466-23799926 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 122 |
| Conread position: | 15-467 |
| Cow position: | chr22:38552401-38551942 (view UCSC Genome Browser custom track) |
| Alignm length: | 467 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 284, 19 |
| Conread position: | 16-466 |
| Cow position: | chr22:43303715-43304169 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 310 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 123, 70 |
| Conread position: | 17-465 |
| Cow position: | chr22:36858998-36859459 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 271, 23 |
| Conread position: | 20-368 |
| Cow position: | chr22:35918607-35918255 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 249 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 268, 172 |
| Conread position: | 21-464 |
| Cow position: | chr22:15309408-15309864 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 267, 201 |
| Conread position: | 24-360 |
| Cow position: | chr22:35935972-35935647 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 233 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 257, 83 |
| Conread position: | 27-465 |
| Cow position: | chr22:3275805-3276262 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 261, 0 |
| Conread position: | 33-446 |
| Cow position: | chr22:9274900-9274489 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 282 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 255, 51 |
| Conread position: | 54-465 |
| Cow position: | chr22:5888662-5889093 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 172, 258 |
| Conread position: | 69-465 |
| Cow position: | chr22:10549145-10548733 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 215, 137 |
| Conread position: | 121-465 |
| Cow position: | chr22:11806303-11806661 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 257 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 164, 83 |
| Conread position: | 138-465 |
| Cow position: | chr22:36573584-36573934 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 239 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 68, 49 |
| Conread position: | 142-467 |
| Cow position: | chr22:43767916-43768262 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 225 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 146, 284 |
| Conread position: | 158-465 |
| Cow position: | chr22:30172623-30172314 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 229 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 89, 10 |
| Conread position: | 164-465 |
| Cow position: | chr22:24429628-24429949 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 228 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 81, 12 |
| Conread position: | 190-465 |
| Cow position: | chr22:2849214-2849507 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 203 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 13, 133 |
| Conread position: | 190-465 |
| Cow position: | chr22:12755358-12755078 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 198 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 98, 30 |
| Conread position: | 224-464 |
| Cow position: | chr22:41417756-41418014 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 185 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 64, 14 |
Show alignments to all cow chromosomes.