Cow genome map
| Conread name: | Lym2-sn16_A03.f |
| Conread position: | 1-465 |
| Cow position: | chr23:1049961-1050445 (view UCSC Genome Browser custom track) |
| Alignm length: | 486 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 41 |
| Conread position: | 1-465 |
| Cow position: | chr23:2024520-2024993 (view UCSC Genome Browser custom track) |
| Alignm length: | 478 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 206 |
| Conread position: | 1-465 |
| Cow position: | chr23:11781360-11780877 (view UCSC Genome Browser custom track) |
| Alignm length: | 488 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 211 |
| Conread position: | 1-468 |
| Cow position: | chr23:2438742-2439222 (view UCSC Genome Browser custom track) |
| Alignm length: | 484 |
| Alignm identity: | 357 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 390 |
| Conread position: | 1-470 |
| Cow position: | chr23:3878527-3879003 (view UCSC Genome Browser custom track) |
| Alignm length: | 488 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 284, 162 |
| Conread position: | 2-450 |
| Cow position: | chr23:16612236-16612698 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 285, 32 |
| Conread position: | 2-465 |
| Cow position: | chr23:30238827-30238356 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 164 |
| Conread position: | 4-368 |
| Cow position: | chr23:38583506-38583143 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 261 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 16, 33 |
| Conread position: | 4-421 |
| Cow position: | chr23:14971386-14971817 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 198 |
| Conread position: | 4-465 |
| Cow position: | chr23:1011268-1011751 (view UCSC Genome Browser custom track) |
| Alignm length: | 486 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 68 |
| Conread position: | 4-465 |
| Cow position: | chr23:2760461-2759989 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 101 |
| Conread position: | 4-465 |
| Cow position: | chr23:3708963-3708489 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 106 |
| Conread position: | 4-465 |
| Cow position: | chr23:4308615-4309096 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 315 |
| Conread position: | 4-465 |
| Cow position: | chr23:4436216-4435742 (view UCSC Genome Browser custom track) |
| Alignm length: | 480 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 284, 26 |
| Conread position: | 4-465 |
| Cow position: | chr23:7313531-7314012 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 355 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 4-465 |
| Cow position: | chr23:14960389-14960867 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 203 |
| Conread position: | 4-465 |
| Cow position: | chr23:19492119-19491638 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 4-465 |
| Cow position: | chr23:20153660-20154133 (view UCSC Genome Browser custom track) |
| Alignm length: | 480 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 101 |
| Conread position: | 4-465 |
| Cow position: | chr23:22144740-22145217 (view UCSC Genome Browser custom track) |
| Alignm length: | 480 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 93 |
| Conread position: | 4-465 |
| Cow position: | chr23:25350918-25350437 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 4-465 |
| Cow position: | chr23:28221268-28220788 (view UCSC Genome Browser custom track) |
| Alignm length: | 484 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 203 |
| Conread position: | 4-465 |
| Cow position: | chr23:36028819-36029300 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 4-465 |
| Cow position: | chr23:37199956-37200435 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 195 |
| Conread position: | 4-470 |
| Cow position: | chr23:4891253-4890770 (view UCSC Genome Browser custom track) |
| Alignm length: | 487 |
| Alignm identity: | 344 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 57 |
| Conread position: | 5-465 |
| Cow position: | chr23:16056301-16055848 (view UCSC Genome Browser custom track) |
| Alignm length: | 478 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 135, 25 |
| Conread position: | 7-383 |
| Cow position: | chr23:4516099-4515708 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 132 |
| Conread position: | 7-465 |
| Cow position: | chr23:5625020-5625487 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 130 |
| Conread position: | 10-465 |
| Cow position: | chr23:11713303-11713778 (view UCSC Genome Browser custom track) |
| Alignm length: | 476 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 11-464 |
| Cow position: | chr23:3452200-3452651 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 315 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 6, 20 |
| Conread position: | 20-465 |
| Cow position: | chr23:15179612-15179149 (view UCSC Genome Browser custom track) |
| Alignm length: | 467 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 268, 186 |
| Conread position: | 30-465 |
| Cow position: | chr23:609266-608801 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 156, 0 |
| Conread position: | 31-465 |
| Cow position: | chr23:8099821-8099376 (view UCSC Genome Browser custom track) |
| Alignm length: | 460 |
| Alignm identity: | 312 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 102, 13 |
| Conread position: | 65-465 |
| Cow position: | chr23:13513563-13513159 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 287 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 228, 41 |
| Conread position: | 78-465 |
| Cow position: | chr23:37652400-37651997 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 210, 360 |
| Conread position: | 98-465 |
| Cow position: | chr23:30635382-30635753 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 167, 108 |
| Conread position: | 99-448 |
| Cow position: | chr23:41568641-41568290 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 249 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 8, 101 |
| Conread position: | 110-465 |
| Cow position: | chr23:7043463-7043836 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 178, 49 |
| Conread position: | 125-465 |
| Cow position: | chr23:31165268-31164908 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 252 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 154, 0 |
| Conread position: | 131-465 |
| Cow position: | chr23:32350327-32350677 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 252 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 154, 75 |
| Conread position: | 132-486 |
| Cow position: | chr23:15040155-15040513 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 255 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 141, 29 |
| Conread position: | 137-465 |
| Cow position: | chr23:34256573-34256914 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 233 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 141, 69 |
| Conread position: | 147-464 |
| Cow position: | chr23:7357649-7357322 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 236 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 141, 73 |
| Conread position: | 153-465 |
| Cow position: | chr23:617064-617393 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 229 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 135, 80 |
| Conread position: | 159-465 |
| Cow position: | chr23:2318772-2319092 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 215 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 131, 38 |
| Conread position: | 192-465 |
| Cow position: | chr23:21792096-21792388 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 211 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 92, 0 |
Show alignments to all cow chromosomes.