Cow genome map
| Conread name: | Lym2-sn16_A03.f |
| Conread position: | 1-465 |
| Cow position: | chr24:19884949-19884465 (view UCSC Genome Browser custom track) |
| Alignm length: | 485 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 2-358 |
| Cow position: | chr24:41231259-41230899 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 261 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 277, 99 |
| Conread position: | 2-383 |
| Cow position: | chr24:22818496-22818102 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 61 |
| Conread position: | 2-465 |
| Cow position: | chr24:38004286-38004768 (view UCSC Genome Browser custom track) |
| Alignm length: | 487 |
| Alignm identity: | 351 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 162 |
| Conread position: | 4-338 |
| Cow position: | chr24:14377004-14377348 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 207 |
| Conread position: | 4-465 |
| Cow position: | chr24:6440405-6439924 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 359 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 426 |
| Conread position: | 4-465 |
| Cow position: | chr24:11691347-11691825 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 203 |
| Conread position: | 4-465 |
| Cow position: | chr24:14195210-14195687 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 203 |
| Conread position: | 4-465 |
| Cow position: | chr24:16081835-16082315 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 445 |
| Conread position: | 4-465 |
| Cow position: | chr24:20367018-20366532 (view UCSC Genome Browser custom track) |
| Alignm length: | 488 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 426 |
| Conread position: | 4-465 |
| Cow position: | chr24:23093392-23093852 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 26 |
| Conread position: | 4-465 |
| Cow position: | chr24:23096130-23096590 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 26 |
| Conread position: | 4-465 |
| Cow position: | chr24:40467765-40468233 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 41 |
| Conread position: | 4-465 |
| Cow position: | chr24:40551276-40550798 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 203 |
| Conread position: | 4-465 |
| Cow position: | chr24:41005132-41004667 (view UCSC Genome Browser custom track) |
| Alignm length: | 477 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 271, 26 |
| Conread position: | 4-466 |
| Cow position: | chr24:14759533-14759057 (view UCSC Genome Browser custom track) |
| Alignm length: | 480 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 462 |
| Conread position: | 4-470 |
| Cow position: | chr24:13234892-13234406 (view UCSC Genome Browser custom track) |
| Alignm length: | 488 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 96 |
| Conread position: | 5-465 |
| Cow position: | chr24:36724718-36724226 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 354 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 6-364 |
| Cow position: | chr24:6463620-6463259 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 124, 233 |
| Conread position: | 6-437 |
| Cow position: | chr24:14723089-14722659 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 31 |
| Conread position: | 7-375 |
| Cow position: | chr24:33936552-33936188 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 272 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 11, 87 |
| Conread position: | 7-465 |
| Cow position: | chr24:6657607-6658080 (view UCSC Genome Browser custom track) |
| Alignm length: | 479 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 183 |
| Conread position: | 7-466 |
| Cow position: | chr24:18267838-18268313 (view UCSC Genome Browser custom track) |
| Alignm length: | 477 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 91 |
| Conread position: | 8-465 |
| Cow position: | chr24:16559656-16560132 (view UCSC Genome Browser custom track) |
| Alignm length: | 478 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 195 |
| Conread position: | 16-465 |
| Cow position: | chr24:11150485-11150951 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 272, 190 |
| Conread position: | 16-465 |
| Cow position: | chr24:42583133-42583591 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 24 |
| Conread position: | 17-465 |
| Cow position: | chr24:19836046-19835579 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 274, 0 |
| Conread position: | 72-465 |
| Cow position: | chr24:6472663-6472261 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 272 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 114, 54 |
| Conread position: | 113-462 |
| Cow position: | chr24:6678583-6678219 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 256 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 175, 24 |
| Conread position: | 132-464 |
| Cow position: | chr24:4413034-4413380 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 243 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 156, 74 |
| Conread position: | 146-465 |
| Cow position: | chr24:29086014-29085681 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 229 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 108, 57 |
| Conread position: | 158-465 |
| Cow position: | chr24:14276505-14276826 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 221 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 130, 62 |
| Conread position: | 158-465 |
| Cow position: | chr24:17454633-17454959 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 126, 0 |
| Conread position: | 162-469 |
| Cow position: | chr24:17312238-17312553 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 203 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 87, 44 |
| Conread position: | 170-425 |
| Cow position: | chr24:12267311-12267048 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 191 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 114, 38 |
| Conread position: | 181-467 |
| Cow position: | chr24:30895263-30894961 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 215 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 22, 247 |
| Conread position: | 194-472 |
| Cow position: | chr24:33029641-33029353 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 196 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 91, 139 |
| Conread position: | 199-467 |
| Cow position: | chr24:16647470-16647752 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 199 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 30, 164 |
| Conread position: | 291-470 |
| Cow position: | chr24:19673943-19673759 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 134 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 79, 170 |
| Conread position: | 294-465 |
| Cow position: | chr24:18212718-18212538 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 131 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 50, 0 |
Show alignments to all cow chromosomes.