Cow genome map
| Conread name: | Lym2-sn16_A03.f |
| Conread position: | 1-465 |
| Cow position: | chr25:15366500-15366037 (view UCSC Genome Browser custom track) |
| Alignm length: | 484 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 105 |
| Conread position: | 1-465 |
| Cow position: | chr25:18489375-18488889 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 351 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 68 |
| Conread position: | 1-465 |
| Cow position: | chr25:19923169-19922687 (view UCSC Genome Browser custom track) |
| Alignm length: | 485 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 137 |
| Conread position: | 1-465 |
| Cow position: | chr25:20632245-20631764 (view UCSC Genome Browser custom track) |
| Alignm length: | 485 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 205 |
| Conread position: | 1-477 |
| Cow position: | chr25:28862222-28861735 (view UCSC Genome Browser custom track) |
| Alignm length: | 497 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 139 |
| Conread position: | 2-460 |
| Cow position: | chr25:12835215-12835692 (view UCSC Genome Browser custom track) |
| Alignm length: | 479 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 136 |
| Conread position: | 3-465 |
| Cow position: | chr25:29359381-29358901 (view UCSC Genome Browser custom track) |
| Alignm length: | 484 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 205 |
| Conread position: | 4-375 |
| Cow position: | chr25:13785202-13784817 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 235 |
| Conread position: | 4-395 |
| Cow position: | chr25:11665022-11664614 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 4-461 |
| Cow position: | chr25:41308528-41308987 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 305 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 14, 60 |
| Conread position: | 4-465 |
| Cow position: | chr25:13352320-13351838 (view UCSC Genome Browser custom track) |
| Alignm length: | 484 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 427 |
| Conread position: | 4-465 |
| Cow position: | chr25:14537312-14537787 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 343 |
| Conread position: | 4-465 |
| Cow position: | chr25:17656995-17656537 (view UCSC Genome Browser custom track) |
| Alignm length: | 476 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 98 |
| Conread position: | 4-465 |
| Cow position: | chr25:18191039-18191515 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 76 |
| Conread position: | 4-465 |
| Cow position: | chr25:18887119-18887603 (view UCSC Genome Browser custom track) |
| Alignm length: | 486 |
| Alignm identity: | 344 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 114 |
| Conread position: | 4-465 |
| Cow position: | chr25:19337972-19338452 (view UCSC Genome Browser custom track) |
| Alignm length: | 487 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 284, 26 |
| Conread position: | 4-465 |
| Cow position: | chr25:20772982-20773469 (view UCSC Genome Browser custom track) |
| Alignm length: | 488 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 4-465 |
| Cow position: | chr25:26900886-26900409 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 205 |
| Conread position: | 4-465 |
| Cow position: | chr25:26930219-26929732 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 67 |
| Conread position: | 4-465 |
| Cow position: | chr25:27019981-27020457 (view UCSC Genome Browser custom track) |
| Alignm length: | 477 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 4-465 |
| Cow position: | chr25:34505464-34505944 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 195 |
| Conread position: | 4-466 |
| Cow position: | chr25:11042971-11042494 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 204 |
| Conread position: | 5-339 |
| Cow position: | chr25:10136046-10135712 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 283, 32 |
| Conread position: | 5-487 |
| Cow position: | chr25:26456046-26455570 (view UCSC Genome Browser custom track) |
| Alignm length: | 494 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 32 |
| Conread position: | 7-465 |
| Cow position: | chr25:29803432-29803907 (view UCSC Genome Browser custom track) |
| Alignm length: | 479 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 200 |
| Conread position: | 12-465 |
| Cow position: | chr25:12939833-12940301 (view UCSC Genome Browser custom track) |
| Alignm length: | 476 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 13 |
| Conread position: | 17-456 |
| Cow position: | chr25:11930207-11930636 (view UCSC Genome Browser custom track) |
| Alignm length: | 460 |
| Alignm identity: | 317 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 13, 28 |
| Conread position: | 22-434 |
| Cow position: | chr25:18250315-18250758 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 70 |
| Conread position: | 38-463 |
| Cow position: | chr25:40138486-40138921 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 287 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 9, 50 |
| Conread position: | 119-465 |
| Cow position: | chr25:26354838-26354474 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 169, 335 |
| Conread position: | 131-464 |
| Cow position: | chr25:25509193-25508844 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 148, 72 |
| Conread position: | 132-420 |
| Cow position: | chr25:21966465-21966164 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 221 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 152, 55 |
| Conread position: | 132-465 |
| Cow position: | chr25:36635237-36635593 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 245 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 96, 35 |
| Conread position: | 172-465 |
| Cow position: | chr25:39555396-39555703 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 214 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 117, 26 |
| Conread position: | 190-459 |
| Cow position: | chr25:7577106-7577392 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 195 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 98, 33 |
| Conread position: | 223-465 |
| Cow position: | chr25:22149950-22149694 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 173 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 69, 0 |
Show alignments to all cow chromosomes.