Cow genome map
| Conread name: | Lym2-sn16_A03.f |
| Conread position: | 1-352 |
| Cow position: | chr27:1535748-1535394 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 119 |
| Conread position: | 1-386 |
| Cow position: | chr27:25801611-25802009 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 169 |
| Conread position: | 1-465 |
| Cow position: | chr27:15273511-15273991 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 29 |
| Conread position: | 2-341 |
| Cow position: | chr27:25965386-25965751 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 260 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 82, 63 |
| Conread position: | 2-348 |
| Cow position: | chr27:12262878-12263217 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 256 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 15, 43 |
| Conread position: | 2-363 |
| Cow position: | chr27:28923568-28923174 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 280 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 15, 259 |
| Conread position: | 2-450 |
| Cow position: | chr27:23294112-23293663 (view UCSC Genome Browser custom track) |
| Alignm length: | 465 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 75 |
| Conread position: | 4-383 |
| Cow position: | chr27:27729914-27730297 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 267 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 284, 15 |
| Conread position: | 4-465 |
| Cow position: | chr27:3991573-3991087 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 101 |
| Conread position: | 4-465 |
| Cow position: | chr27:8200366-8199889 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 136 |
| Conread position: | 4-465 |
| Cow position: | chr27:11433682-11433206 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 206, 26 |
| Conread position: | 4-465 |
| Cow position: | chr27:13900456-13899984 (view UCSC Genome Browser custom track) |
| Alignm length: | 479 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 192 |
| Conread position: | 4-465 |
| Cow position: | chr27:15034533-15035016 (view UCSC Genome Browser custom track) |
| Alignm length: | 484 |
| Alignm identity: | 355 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 4-465 |
| Cow position: | chr27:16031838-16032311 (view UCSC Genome Browser custom track) |
| Alignm length: | 487 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 121 |
| Conread position: | 4-465 |
| Cow position: | chr27:19524153-19524631 (view UCSC Genome Browser custom track) |
| Alignm length: | 479 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 4-465 |
| Cow position: | chr27:22742827-22743301 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 344 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 280, 26 |
| Conread position: | 4-465 |
| Cow position: | chr27:26327621-26327145 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 203 |
| Conread position: | 4-465 |
| Cow position: | chr27:26552863-26553348 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 65 |
| Conread position: | 4-465 |
| Cow position: | chr27:27289060-27288587 (view UCSC Genome Browser custom track) |
| Alignm length: | 478 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 337 |
| Conread position: | 4-465 |
| Cow position: | chr27:27665570-27665086 (view UCSC Genome Browser custom track) |
| Alignm length: | 491 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 207 |
| Conread position: | 7-375 |
| Cow position: | chr27:5913495-5913112 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 7-465 |
| Cow position: | chr27:15634776-15635250 (view UCSC Genome Browser custom track) |
| Alignm length: | 479 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 102 |
| Conread position: | 8-465 |
| Cow position: | chr27:13352852-13352395 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 243 |
| Conread position: | 17-465 |
| Cow position: | chr27:9990666-9991125 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 268, 172 |
| Conread position: | 45-456 |
| Cow position: | chr27:25059636-25059230 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 283 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 89, 15 |
| Conread position: | 53-362 |
| Cow position: | chr27:30536502-30536194 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 238, 169 |
| Conread position: | 147-363 |
| Cow position: | chr27:27235552-27235340 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 165 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 121, 40 |
| Conread position: | 151-465 |
| Cow position: | chr27:66392-66725 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 237 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 133, 0 |
| Conread position: | 169-463 |
| Cow position: | chr27:25884507-25884828 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 224 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 70, 264 |
| Conread position: | 202-464 |
| Cow position: | chr27:1211731-1211450 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 197 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 208-465 |
| Cow position: | chr27:6374908-6375167 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 80, 60 |
| Conread position: | 226-465 |
| Cow position: | chr27:4802849-4803107 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 184 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 227-465 |
| Cow position: | chr27:21453767-21453510 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 181 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 57, 0 |
Show alignments to all cow chromosomes.