Cow genome map
| Conread name: | Lym2-sn16_A03.f |
| Conread position: | 1-465 |
| Cow position: | chr29:45881-46360 (view UCSC Genome Browser custom track) |
| Alignm length: | 485 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 52 |
| Conread position: | 1-465 |
| Cow position: | chr29:8624617-8625090 (view UCSC Genome Browser custom track) |
| Alignm length: | 484 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 287, 29 |
| Conread position: | 1-465 |
| Cow position: | chr29:13019267-13018792 (view UCSC Genome Browser custom track) |
| Alignm length: | 486 |
| Alignm identity: | 344 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 106 |
| Conread position: | 1-465 |
| Cow position: | chr29:16346785-16346302 (view UCSC Genome Browser custom track) |
| Alignm length: | 486 |
| Alignm identity: | 344 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 272 |
| Conread position: | 1-465 |
| Cow position: | chr29:19620689-19621165 (view UCSC Genome Browser custom track) |
| Alignm length: | 479 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 289, 29 |
| Conread position: | 2-366 |
| Cow position: | chr29:42806304-42805929 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 62 |
| Conread position: | 2-465 |
| Cow position: | chr29:132098-131623 (view UCSC Genome Browser custom track) |
| Alignm length: | 484 |
| Alignm identity: | 356 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 38 |
| Conread position: | 4-462 |
| Cow position: | chr29:21430281-21430754 (view UCSC Genome Browser custom track) |
| Alignm length: | 478 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 280, 26 |
| Conread position: | 4-463 |
| Cow position: | chr29:608057-608528 (view UCSC Genome Browser custom track) |
| Alignm length: | 477 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 284, 26 |
| Conread position: | 4-464 |
| Cow position: | chr29:15624122-15624605 (view UCSC Genome Browser custom track) |
| Alignm length: | 485 |
| Alignm identity: | 355 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 322 |
| Conread position: | 4-464 |
| Cow position: | chr29:15995803-15996282 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 155, 26 |
| Conread position: | 4-465 |
| Cow position: | chr29:107633-107168 (view UCSC Genome Browser custom track) |
| Alignm length: | 478 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 240, 124 |
| Conread position: | 4-465 |
| Cow position: | chr29:408686-409160 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 286, 26 |
| Conread position: | 4-465 |
| Cow position: | chr29:5785389-5784908 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 352 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 4-465 |
| Cow position: | chr29:6263424-6263905 (view UCSC Genome Browser custom track) |
| Alignm length: | 485 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 203 |
| Conread position: | 4-465 |
| Cow position: | chr29:7428535-7429020 (view UCSC Genome Browser custom track) |
| Alignm length: | 487 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 321 |
| Conread position: | 4-465 |
| Cow position: | chr29:7846967-7846490 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 283, 26 |
| Conread position: | 4-465 |
| Cow position: | chr29:10644835-10645309 (view UCSC Genome Browser custom track) |
| Alignm length: | 478 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 203 |
| Conread position: | 4-465 |
| Cow position: | chr29:13057328-13056846 (view UCSC Genome Browser custom track) |
| Alignm length: | 487 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 74 |
| Conread position: | 4-465 |
| Cow position: | chr29:13899242-13898761 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 4-465 |
| Cow position: | chr29:13923083-13922602 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 4-465 |
| Cow position: | chr29:15260413-15260894 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 354 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 4-465 |
| Cow position: | chr29:15966977-15967458 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 4-465 |
| Cow position: | chr29:16036837-16037310 (view UCSC Genome Browser custom track) |
| Alignm length: | 478 |
| Alignm identity: | 344 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 329 |
| Conread position: | 4-465 |
| Cow position: | chr29:16171531-16172011 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 127 |
| Conread position: | 4-465 |
| Cow position: | chr29:19525713-19526190 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 173 |
| Conread position: | 4-465 |
| Cow position: | chr29:19890149-19889675 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 284, 26 |
| Conread position: | 4-465 |
| Cow position: | chr29:23979287-23978804 (view UCSC Genome Browser custom track) |
| Alignm length: | 484 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 4-465 |
| Cow position: | chr29:31095010-31095490 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 211 |
| Conread position: | 4-465 |
| Cow position: | chr29:32557169-32557650 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 4-465 |
| Cow position: | chr29:35274443-35274912 (view UCSC Genome Browser custom track) |
| Alignm length: | 478 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 388 |
| Conread position: | 4-465 |
| Cow position: | chr29:39424562-39425043 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 4-465 |
| Cow position: | chr29:40470988-40470520 (view UCSC Genome Browser custom track) |
| Alignm length: | 477 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 66 |
| Conread position: | 4-465 |
| Cow position: | chr29:40500412-40500914 (view UCSC Genome Browser custom track) |
| Alignm length: | 504 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 350 |
| Conread position: | 4-465 |
| Cow position: | chr29:45207088-45206609 (view UCSC Genome Browser custom track) |
| Alignm length: | 484 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 186 |
| Conread position: | 4-467 |
| Cow position: | chr29:39077140-39077618 (view UCSC Genome Browser custom track) |
| Alignm length: | 484 |
| Alignm identity: | 344 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 21 |
| Conread position: | 5-358 |
| Cow position: | chr29:6219224-6219574 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 86 |
| Conread position: | 5-363 |
| Cow position: | chr29:14500441-14500070 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 104 |
| Conread position: | 5-464 |
| Cow position: | chr29:9640200-9640679 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 358 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 124 |
| Conread position: | 5-465 |
| Cow position: | chr29:253492-253017 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 61 |
| Conread position: | 5-465 |
| Cow position: | chr29:6873297-6873774 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 202 |
| Conread position: | 5-465 |
| Cow position: | chr29:17407714-17407227 (view UCSC Genome Browser custom track) |
| Alignm length: | 488 |
| Alignm identity: | 363 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 5-465 |
| Cow position: | chr29:32961891-32961414 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 19 |
| Conread position: | 6-465 |
| Cow position: | chr29:27260547-27261018 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 194 |
| Conread position: | 7-372 |
| Cow position: | chr29:32288957-32288583 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 200 |
| Conread position: | 8-392 |
| Cow position: | chr29:648392-648000 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 23 |
| Conread position: | 8-465 |
| Cow position: | chr29:26162264-26162735 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 130 |
| Conread position: | 10-465 |
| Cow position: | chr29:25929946-25930417 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 430 |
| Conread position: | 16-465 |
| Cow position: | chr29:7750292-7750751 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 269, 20 |
| Conread position: | 16-465 |
| Cow position: | chr29:10845520-10845054 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 191 |
| Conread position: | 18-465 |
| Cow position: | chr29:5980158-5980618 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 141, 189 |
| Conread position: | 25-461 |
| Cow position: | chr29:13075966-13075503 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 329 |
| Alignm E-value: | 7.9874e-44 |
| Alignm gaps (pig, cow): | 15, 61 |
| Conread position: | 66-465 |
| Cow position: | chr29:18524219-18524623 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 195, 21 |
| Conread position: | 69-465 |
| Cow position: | chr29:5960383-5959971 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 215, 137 |
| Conread position: | 70-465 |
| Cow position: | chr29:21267174-21266787 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 278 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 151, 80 |
| Conread position: | 131-465 |
| Cow position: | chr29:10021877-10022230 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 0 |
| Conread position: | 152-428 |
| Cow position: | chr29:9330404-9330114 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 197 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 136, 0 |
| Conread position: | 161-465 |
| Cow position: | chr29:1477587-1477259 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 227 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 169-465 |
| Cow position: | chr29:5237428-5237117 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 215 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 119, 188 |
| Conread position: | 198-465 |
| Cow position: | chr29:31123218-31122933 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 198 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 86, 30 |
Show alignments to all cow chromosomes.