Cow genome map

Conread name: Lym2-sn16_A03.f

Conread position: 1-342
Cow position:
Alignm length: 352
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 289, 34

Conread position: 1-460
Cow position:
Alignm length: 480
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 0

Conread position: 1-463
Cow position:
Alignm length: 492
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 29

Conread position: 1-463
Cow position:
Alignm length: 480
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 20

Conread position: 1-463
Cow position:
Alignm length: 485
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 87

Conread position: 1-465
Cow position:
Alignm length: 486
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 66

Conread position: 1-465
Cow position:
Alignm length: 482
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 50

Conread position: 1-465
Cow position:
Alignm length: 485
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 142

Conread position: 1-465
Cow position:
Alignm length: 483
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 229

Conread position: 1-465
Cow position:
Alignm length: 485
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 0

Conread position: 1-465
Cow position:
Alignm length: 485
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 206

Conread position: 1-465
Cow position:
Alignm length: 481
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 281, 30

Conread position: 1-465
Cow position:
Alignm length: 484
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 30

Conread position: 1-467
Cow position:
Alignm length: 489
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 429

Conread position: 2-465
Cow position:
Alignm length: 481
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 286, 91

Conread position: 2-470
Cow position:
Alignm length: 491
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 210

Conread position: 3-351
Cow position:
Alignm length: 368
Alignm identity: 255
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 16, 39

Conread position: 3-463
Cow position:
Alignm length: 480
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 285, 17

Conread position: 4-334
Cow position:
Alignm length: 346
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 129

Conread position: 4-363
Cow position:
Alignm length: 380
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 168

Conread position: 4-363
Cow position:
Alignm length: 375
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 37

Conread position: 4-456
Cow position:
Alignm length: 473
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 102

Conread position: 4-460
Cow position:
Alignm length: 477
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 0

Conread position: 4-463
Cow position:
Alignm length: 483
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 0

Conread position: 4-465
Cow position:
Alignm length: 480
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 118

Conread position: 4-465
Cow position:
Alignm length: 486
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 72

Conread position: 4-465
Cow position:
Alignm length: 482
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 38

Conread position: 4-465
Cow position:
Alignm length: 482
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 0

Conread position: 4-465
Cow position:
Alignm length: 478
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 26

Conread position: 4-465
Cow position:
Alignm length: 483
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 0

Conread position: 4-465
Cow position:
Alignm length: 483
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 203

Conread position: 4-465
Cow position:
Alignm length: 482
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 4-465
Cow position:
Alignm length: 482
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 150

Conread position: 4-465
Cow position:
Alignm length: 482
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 0

Conread position: 4-465
Cow position:
Alignm length: 484
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 92

Conread position: 4-465
Cow position:
Alignm length: 481
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 186

Conread position: 4-465
Cow position:
Alignm length: 480
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 41

Conread position: 4-465
Cow position:
Alignm length: 482
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 0

Conread position: 4-465
Cow position:
Alignm length: 482
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 0

Conread position: 4-465
Cow position:
Alignm length: 482
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 32

Conread position: 4-465
Cow position:
Alignm length: 481
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 26

Conread position: 4-465
Cow position:
Alignm length: 482
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 94

Conread position: 4-465
Cow position:
Alignm length: 494
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 203

Conread position: 4-465
Cow position:
Alignm length: 481
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 204

Conread position: 4-465
Cow position:
Alignm length: 477
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 0

Conread position: 4-465
Cow position:
Alignm length: 481
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 0

Conread position: 4-465
Cow position:
Alignm length: 482
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 203

Conread position: 4-465
Cow position:
Alignm length: 482
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 0

Conread position: 4-465
Cow position:
Alignm length: 482
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 0

Conread position: 4-465
Cow position:
Alignm length: 481
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 0

Conread position: 4-465
Cow position:
Alignm length: 490
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 206

Conread position: 4-465
Cow position:
Alignm length: 484
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 4-465
Cow position:
Alignm length: 480
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 0

Conread position: 5-358
Cow position:
Alignm length: 365
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 56

Conread position: 5-464
Cow position:
Alignm length: 491
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 0

Conread position: 6-421
Cow position:
Alignm length: 431
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 248, 8

Conread position: 7-465
Cow position:
Alignm length: 484
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 343

Conread position: 7-465
Cow position:
Alignm length: 479
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 200

Conread position: 7-465
Cow position:
Alignm length: 486
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 236

Conread position: 8-465
Cow position:
Alignm length: 477
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 74

Conread position: 16-465
Cow position:
Alignm length: 469
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 268, 19

Conread position: 17-465
Cow position:
Alignm length: 468
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 0

Conread position: 25-465
Cow position:
Alignm length: 469
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 32

Conread position: 30-465
Cow position:
Alignm length: 456
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 258, 399

Conread position: 31-467
Cow position:
Alignm length: 456
Alignm identity: 301
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 256, 48

Conread position: 45-461
Cow position:
Alignm length: 442
Alignm identity: 302
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 61, 51

Conread position: 54-451
Cow position:
Alignm length: 418
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 234, 0

Conread position: 55-456
Cow position:
Alignm length: 421
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 235, 32

Conread position: 57-465
Cow position:
Alignm length: 431
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 231, 149

Conread position: 59-311
Cow position:
Alignm length: 254
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 17

Conread position: 69-368
Cow position:
Alignm length: 313
Alignm identity: 223
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 134, 8

Conread position: 76-375
Cow position:
Alignm length: 314
Alignm identity: 211
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 212, 130

Conread position: 76-465
Cow position:
Alignm length: 414
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 211, 43

Conread position: 77-486
Cow position:
Alignm length: 428
Alignm identity: 278
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 214, 66

Conread position: 78-465
Cow position:
Alignm length: 403
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 210, 235

Conread position: 80-364
Cow position:
Alignm length: 297
Alignm identity: 198
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 201, 50

Conread position: 97-342
Cow position:
Alignm length: 248
Alignm identity: 171
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 149, 101

Conread position: 98-447
Cow position:
Alignm length: 371
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 185, 0

Conread position: 105-465
Cow position:
Alignm length: 387
Alignm identity: 264
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 39, 105

Conread position: 108-464
Cow position:
Alignm length: 379
Alignm identity: 259
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 142, 63

Conread position: 108-465
Cow position:
Alignm length: 377
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 180, 98

Conread position: 114-465
Cow position:
Alignm length: 371
Alignm identity: 246
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 100, 17

Conread position: 119-465
Cow position:
Alignm length: 366
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 114

Conread position: 119-465
Cow position:
Alignm length: 364
Alignm identity: 253
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 169, 60

Conread position: 123-465
Cow position:
Alignm length: 352
Alignm identity: 250
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 226, 48

Conread position: 128-352
Cow position:
Alignm length: 227
Alignm identity: 156
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 122, 111

Conread position: 131-465
Cow position:
Alignm length: 348
Alignm identity: 238
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 153, 17

Conread position: 136-465
Cow position:
Alignm length: 347
Alignm identity: 248
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 148, 23

Conread position: 143-465
Cow position:
Alignm length: 341
Alignm identity: 226
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 63, 226

Conread position: 144-467
Cow position:
Alignm length: 337
Alignm identity: 220
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 138, 54

Conread position: 148-465
Cow position:
Alignm length: 341
Alignm identity: 236
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 11, 0

Conread position: 157-467
Cow position:
Alignm length: 328
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 8

Conread position: 159-465
Cow position:
Alignm length: 334
Alignm identity: 229
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 78, 43

Conread position: 159-465
Cow position:
Alignm length: 326
Alignm identity: 228
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 129, 39

Conread position: 165-349
Cow position:
Alignm length: 197
Alignm identity: 144
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 64, 26

Conread position: 224-465
Cow position:
Alignm length: 262
Alignm identity: 181
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 61, 0

Show alignments to all cow chromosomes.