Cow genome map
Conread name: | Lym2-sn16_A03.f |
Conread position: | 1-349 |
Cow position: | chr7:20368489-20368846 (view UCSC Genome Browser custom track) |
Alignm length: | 364 |
Alignm identity: | 239 |
Alignm E-value: | 3e-30 |
Alignm gaps (pig, cow): | 16, 153 |
Conread position: | 1-361 |
Cow position: | chr7:33069871-33070241 (view UCSC Genome Browser custom track) |
Alignm length: | 375 |
Alignm identity: | 273 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 29, 206 |
Conread position: | 1-383 |
Cow position: | chr7:49071379-49071776 (view UCSC Genome Browser custom track) |
Alignm length: | 401 |
Alignm identity: | 299 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 29, 198 |
Conread position: | 1-456 |
Cow position: | chr7:39596707-39597179 (view UCSC Genome Browser custom track) |
Alignm length: | 479 |
Alignm identity: | 350 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 21, 45 |
Conread position: | 1-464 |
Cow position: | chr7:39794485-39794003 (view UCSC Genome Browser custom track) |
Alignm length: | 483 |
Alignm identity: | 335 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 21, 0 |
Conread position: | 1-465 |
Cow position: | chr7:113246-112759 (view UCSC Genome Browser custom track) |
Alignm length: | 490 |
Alignm identity: | 353 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 21, 194 |
Conread position: | 1-465 |
Cow position: | chr7:1368066-1368534 (view UCSC Genome Browser custom track) |
Alignm length: | 486 |
Alignm identity: | 342 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 29, 92 |
Conread position: | 1-465 |
Cow position: | chr7:14212774-14213235 (view UCSC Genome Browser custom track) |
Alignm length: | 480 |
Alignm identity: | 343 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 21, 144 |
Conread position: | 1-465 |
Cow position: | chr7:21232377-21232858 (view UCSC Genome Browser custom track) |
Alignm length: | 486 |
Alignm identity: | 343 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 287, 29 |
Conread position: | 1-465 |
Cow position: | chr7:24805858-24806337 (view UCSC Genome Browser custom track) |
Alignm length: | 484 |
Alignm identity: | 347 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 21, 250 |
Conread position: | 1-465 |
Cow position: | chr7:57025425-57025902 (view UCSC Genome Browser custom track) |
Alignm length: | 491 |
Alignm identity: | 357 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 16, 51 |
Conread position: | 2-450 |
Cow position: | chr7:99934-100402 (view UCSC Genome Browser custom track) |
Alignm length: | 479 |
Alignm identity: | 335 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 15, 50 |
Conread position: | 2-461 |
Cow position: | chr7:62393144-62392679 (view UCSC Genome Browser custom track) |
Alignm length: | 482 |
Alignm identity: | 326 |
Alignm E-value: | 4.2039e-45 |
Alignm gaps (pig, cow): | 23, 64 |
Conread position: | 2-465 |
Cow position: | chr7:21314518-21314048 (view UCSC Genome Browser custom track) |
Alignm length: | 482 |
Alignm identity: | 331 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 286, 22 |
Conread position: | 2-467 |
Cow position: | chr7:22760258-22759787 (view UCSC Genome Browser custom track) |
Alignm length: | 477 |
Alignm identity: | 317 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 16, 94 |
Conread position: | 3-465 |
Cow position: | chr7:37165490-37165014 (view UCSC Genome Browser custom track) |
Alignm length: | 484 |
Alignm identity: | 346 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 19, 187 |
Conread position: | 3-465 |
Cow position: | chr7:67491265-67490822 (view UCSC Genome Browser custom track) |
Alignm length: | 477 |
Alignm identity: | 333 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 14, 39 |
Conread position: | 4-352 |
Cow position: | chr7:24932931-24933287 (view UCSC Genome Browser custom track) |
Alignm length: | 360 |
Alignm identity: | 269 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 19, 203 |
Conread position: | 4-462 |
Cow position: | chr7:64354644-64354170 (view UCSC Genome Browser custom track) |
Alignm length: | 475 |
Alignm identity: | 342 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 18, 0 |
Conread position: | 4-465 |
Cow position: | chr7:13282-13764 (view UCSC Genome Browser custom track) |
Alignm length: | 483 |
Alignm identity: | 344 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 18, 0 |
Conread position: | 4-465 |
Cow position: | chr7:5260312-5260785 (view UCSC Genome Browser custom track) |
Alignm length: | 477 |
Alignm identity: | 342 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 18, 203 |
Conread position: | 4-465 |
Cow position: | chr7:6626748-6627228 (view UCSC Genome Browser custom track) |
Alignm length: | 482 |
Alignm identity: | 341 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 18, 92 |
Conread position: | 4-465 |
Cow position: | chr7:7261150-7260669 (view UCSC Genome Browser custom track) |
Alignm length: | 482 |
Alignm identity: | 340 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 18, 0 |
Conread position: | 4-465 |
Cow position: | chr7:10428795-10429274 (view UCSC Genome Browser custom track) |
Alignm length: | 484 |
Alignm identity: | 341 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 18, 203 |
Conread position: | 4-465 |
Cow position: | chr7:11461502-11461983 (view UCSC Genome Browser custom track) |
Alignm length: | 482 |
Alignm identity: | 347 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 18, 0 |
Conread position: | 4-465 |
Cow position: | chr7:13531279-13531756 (view UCSC Genome Browser custom track) |
Alignm length: | 481 |
Alignm identity: | 344 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 18, 203 |
Conread position: | 4-465 |
Cow position: | chr7:20151090-20151567 (view UCSC Genome Browser custom track) |
Alignm length: | 481 |
Alignm identity: | 351 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 280, 26 |
Conread position: | 4-465 |
Cow position: | chr7:20796831-20797301 (view UCSC Genome Browser custom track) |
Alignm length: | 476 |
Alignm identity: | 340 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 286, 26 |
Conread position: | 4-465 |
Cow position: | chr7:25442398-25441929 (view UCSC Genome Browser custom track) |
Alignm length: | 475 |
Alignm identity: | 334 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 265, 26 |
Conread position: | 4-465 |
Cow position: | chr7:26927546-26928027 (view UCSC Genome Browser custom track) |
Alignm length: | 482 |
Alignm identity: | 346 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 18, 0 |
Conread position: | 4-465 |
Cow position: | chr7:27458106-27458589 (view UCSC Genome Browser custom track) |
Alignm length: | 484 |
Alignm identity: | 337 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 19, 0 |
Conread position: | 4-465 |
Cow position: | chr7:34151572-34151092 (view UCSC Genome Browser custom track) |
Alignm length: | 481 |
Alignm identity: | 349 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 284, 0 |
Conread position: | 4-465 |
Cow position: | chr7:34414429-34414908 (view UCSC Genome Browser custom track) |
Alignm length: | 483 |
Alignm identity: | 346 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 14, 168 |
Conread position: | 4-465 |
Cow position: | chr7:34488542-34488066 (view UCSC Genome Browser custom track) |
Alignm length: | 480 |
Alignm identity: | 340 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 18, 64 |
Conread position: | 4-465 |
Cow position: | chr7:42225169-42225648 (view UCSC Genome Browser custom track) |
Alignm length: | 485 |
Alignm identity: | 352 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 18, 204 |
Conread position: | 4-465 |
Cow position: | chr7:46748612-46748135 (view UCSC Genome Browser custom track) |
Alignm length: | 483 |
Alignm identity: | 338 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 18, 125 |
Conread position: | 4-465 |
Cow position: | chr7:55039852-55040334 (view UCSC Genome Browser custom track) |
Alignm length: | 483 |
Alignm identity: | 347 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 18, 0 |
Conread position: | 4-465 |
Cow position: | chr7:60727830-60728304 (view UCSC Genome Browser custom track) |
Alignm length: | 479 |
Alignm identity: | 346 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 14, 195 |
Conread position: | 4-465 |
Cow position: | chr7:61577507-61577981 (view UCSC Genome Browser custom track) |
Alignm length: | 479 |
Alignm identity: | 345 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 20, 204 |
Conread position: | 4-465 |
Cow position: | chr7:65813464-65812984 (view UCSC Genome Browser custom track) |
Alignm length: | 481 |
Alignm identity: | 345 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 18, 0 |
Conread position: | 4-467 |
Cow position: | chr7:537215-537694 (view UCSC Genome Browser custom track) |
Alignm length: | 485 |
Alignm identity: | 360 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 26, 51 |
Conread position: | 4-467 |
Cow position: | chr7:39132205-39132685 (view UCSC Genome Browser custom track) |
Alignm length: | 488 |
Alignm identity: | 344 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 239, 27 |
Conread position: | 6-450 |
Cow position: | chr7:58336398-58336861 (view UCSC Genome Browser custom track) |
Alignm length: | 467 |
Alignm identity: | 326 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 16, 201 |
Conread position: | 6-465 |
Cow position: | chr7:38146097-38146581 (view UCSC Genome Browser custom track) |
Alignm length: | 490 |
Alignm identity: | 350 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 102, 24 |
Conread position: | 7-465 |
Cow position: | chr7:42302839-42303305 (view UCSC Genome Browser custom track) |
Alignm length: | 478 |
Alignm identity: | 339 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 281, 23 |
Conread position: | 7-465 |
Cow position: | chr7:58642932-58643402 (view UCSC Genome Browser custom track) |
Alignm length: | 479 |
Alignm identity: | 345 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 10, 124 |
Conread position: | 7-465 |
Cow position: | chr7:59773938-59773461 (view UCSC Genome Browser custom track) |
Alignm length: | 479 |
Alignm identity: | 347 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 15, 325 |
Conread position: | 8-370 |
Cow position: | chr7:45953332-45952955 (view UCSC Genome Browser custom track) |
Alignm length: | 380 |
Alignm identity: | 282 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 109, 271 |
Conread position: | 14-465 |
Cow position: | chr7:8564-8098 (view UCSC Genome Browser custom track) |
Alignm length: | 471 |
Alignm identity: | 318 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 18, 226 |
Conread position: | 15-465 |
Cow position: | chr7:33403266-33403734 (view UCSC Genome Browser custom track) |
Alignm length: | 469 |
Alignm identity: | 337 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 273, 0 |
Conread position: | 17-427 |
Cow position: | chr7:59682022-59681576 (view UCSC Genome Browser custom track) |
Alignm length: | 451 |
Alignm identity: | 311 |
Alignm E-value: | 3.00018e-42 |
Alignm gaps (pig, cow): | 31, 13 |
Conread position: | 18-465 |
Cow position: | chr7:54697907-54697468 (view UCSC Genome Browser custom track) |
Alignm length: | 461 |
Alignm identity: | 336 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 17, 125 |
Conread position: | 23-465 |
Cow position: | chr7:29473062-29472603 (view UCSC Genome Browser custom track) |
Alignm length: | 463 |
Alignm identity: | 337 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 5, 188 |
Conread position: | 33-465 |
Cow position: | chr7:20062071-20061624 (view UCSC Genome Browser custom track) |
Alignm length: | 452 |
Alignm identity: | 322 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 251, 196 |
Conread position: | 38-465 |
Cow position: | chr7:20771993-20772436 (view UCSC Genome Browser custom track) |
Alignm length: | 446 |
Alignm identity: | 323 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 217, 180 |
Conread position: | 45-465 |
Cow position: | chr7:1601363-1601775 (view UCSC Genome Browser custom track) |
Alignm length: | 424 |
Alignm identity: | 304 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 116, 104 |
Conread position: | 57-467 |
Cow position: | chr7:21878088-21878522 (view UCSC Genome Browser custom track) |
Alignm length: | 439 |
Alignm identity: | 284 |
Alignm E-value: | 7e-29 |
Alignm gaps (pig, cow): | 82, 20 |
Conread position: | 60-455 |
Cow position: | chr7:46900019-46900433 (view UCSC Genome Browser custom track) |
Alignm length: | 415 |
Alignm identity: | 294 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 227, 0 |
Conread position: | 71-466 |
Cow position: | chr7:51921663-51921273 (view UCSC Genome Browser custom track) |
Alignm length: | 412 |
Alignm identity: | 265 |
Alignm E-value: | 9e-21 |
Alignm gaps (pig, cow): | 60, 51 |
Conread position: | 91-456 |
Cow position: | chr7:59140211-59139834 (view UCSC Genome Browser custom track) |
Alignm length: | 384 |
Alignm identity: | 270 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 19, 7 |
Conread position: | 99-426 |
Cow position: | chr7:20785505-20785175 (view UCSC Genome Browser custom track) |
Alignm length: | 338 |
Alignm identity: | 233 |
Alignm E-value: | 2e-37 |
Alignm gaps (pig, cow): | 167, 101 |
Conread position: | 127-466 |
Cow position: | chr7:1816110-1816457 (view UCSC Genome Browser custom track) |
Alignm length: | 358 |
Alignm identity: | 244 |
Alignm E-value: | 3e-32 |
Alignm gaps (pig, cow): | 35, 54 |
Conread position: | 130-465 |
Cow position: | chr7:950709-950352 (view UCSC Genome Browser custom track) |
Alignm length: | 361 |
Alignm identity: | 260 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 139, 72 |
Conread position: | 132-465 |
Cow position: | chr7:52764785-52764437 (view UCSC Genome Browser custom track) |
Alignm length: | 354 |
Alignm identity: | 254 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 156, 57 |
Conread position: | 143-368 |
Cow position: | chr7:28624587-28624352 (view UCSC Genome Browser custom track) |
Alignm length: | 238 |
Alignm identity: | 173 |
Alignm E-value: | 3e-32 |
Alignm gaps (pig, cow): | 143, 189 |
Conread position: | 144-465 |
Cow position: | chr7:3127827-3127490 (view UCSC Genome Browser custom track) |
Alignm length: | 342 |
Alignm identity: | 247 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 144, 62 |
Conread position: | 146-419 |
Cow position: | chr7:66572521-66572805 (view UCSC Genome Browser custom track) |
Alignm length: | 288 |
Alignm identity: | 205 |
Alignm E-value: | 6e-37 |
Alignm gaps (pig, cow): | 93, 60 |
Conread position: | 155-465 |
Cow position: | chr7:67677546-67677219 (view UCSC Genome Browser custom track) |
Alignm length: | 331 |
Alignm identity: | 230 |
Alignm E-value: | 5e-35 |
Alignm gaps (pig, cow): | 132, 12 |
Conread position: | 159-463 |
Cow position: | chr7:42427319-42426998 (view UCSC Genome Browser custom track) |
Alignm length: | 322 |
Alignm identity: | 221 |
Alignm E-value: | 6e-37 |
Alignm gaps (pig, cow): | 133, 0 |
Conread position: | 159-501 |
Cow position: | chr7:901647-902008 (view UCSC Genome Browser custom track) |
Alignm length: | 363 |
Alignm identity: | 247 |
Alignm E-value: | 2e-37 |
Alignm gaps (pig, cow): | 125, 31 |
Conread position: | 200-463 |
Cow position: | chr7:527380-527102 (view UCSC Genome Browser custom track) |
Alignm length: | 282 |
Alignm identity: | 194 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 88, 189 |
Conread position: | 214-465 |
Cow position: | chr7:18425624-18425885 (view UCSC Genome Browser custom track) |
Alignm length: | 266 |
Alignm identity: | 181 |
Alignm E-value: | 4e-24 |
Alignm gaps (pig, cow): | 74, 14 |
Conread position: | 288-463 |
Cow position: | chr7:31866454-31866274 (view UCSC Genome Browser custom track) |
Alignm length: | 183 |
Alignm identity: | 131 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 61, 141 |
Show alignments to all cow chromosomes.