Cow genome map

Conread name: Lym2-sn16_A03.f

Conread position: 1-375
Cow position:
Alignm length: 389
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 286, 94

Conread position: 1-465
Cow position:
Alignm length: 485
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 286, 322

Conread position: 1-465
Cow position:
Alignm length: 486
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 87

Conread position: 1-465
Cow position:
Alignm length: 485
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 206

Conread position: 1-465
Cow position:
Alignm length: 483
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 87

Conread position: 1-465
Cow position:
Alignm length: 488
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 69

Conread position: 2-368
Cow position:
Alignm length: 389
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 47

Conread position: 2-386
Cow position:
Alignm length: 394
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 125

Conread position: 2-449
Cow position:
Alignm length: 467
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 286, 115

Conread position: 2-465
Cow position:
Alignm length: 484
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 39

Conread position: 2-465
Cow position:
Alignm length: 478
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 168

Conread position: 3-465
Cow position:
Alignm length: 479
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 165

Conread position: 4-363
Cow position:
Alignm length: 375
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 204

Conread position: 4-363
Cow position:
Alignm length: 375
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 26

Conread position: 4-363
Cow position:
Alignm length: 375
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 0

Conread position: 4-368
Cow position:
Alignm length: 374
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 39

Conread position: 4-368
Cow position:
Alignm length: 378
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 286, 26

Conread position: 4-374
Cow position:
Alignm length: 382
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 26

Conread position: 4-421
Cow position:
Alignm length: 436
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 172

Conread position: 4-447
Cow position:
Alignm length: 469
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 214

Conread position: 4-461
Cow position:
Alignm length: 490
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 220

Conread position: 4-464
Cow position:
Alignm length: 481
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 125

Conread position: 4-465
Cow position:
Alignm length: 488
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 102

Conread position: 4-465
Cow position:
Alignm length: 482
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 105

Conread position: 4-465
Cow position:
Alignm length: 483
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 40

Conread position: 4-465
Cow position:
Alignm length: 486
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 257

Conread position: 4-465
Cow position:
Alignm length: 473
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 35

Conread position: 4-465
Cow position:
Alignm length: 482
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 0

Conread position: 4-465
Cow position:
Alignm length: 482
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 0

Conread position: 4-465
Cow position:
Alignm length: 482
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 183

Conread position: 4-465
Cow position:
Alignm length: 481
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 0

Conread position: 4-465
Cow position:
Alignm length: 484
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 142

Conread position: 4-465
Cow position:
Alignm length: 490
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 328

Conread position: 4-465
Cow position:
Alignm length: 487
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 0

Conread position: 4-465
Cow position:
Alignm length: 481
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 281, 27

Conread position: 4-465
Cow position:
Alignm length: 481
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 280, 26

Conread position: 4-465
Cow position:
Alignm length: 482
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 203

Conread position: 4-465
Cow position:
Alignm length: 482
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 203

Conread position: 4-465
Cow position:
Alignm length: 486
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 186

Conread position: 4-465
Cow position:
Alignm length: 470
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 42

Conread position: 4-465
Cow position:
Alignm length: 482
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 34

Conread position: 4-465
Cow position:
Alignm length: 481
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 74

Conread position: 4-465
Cow position:
Alignm length: 476
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 72

Conread position: 4-465
Cow position:
Alignm length: 481
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 280, 202

Conread position: 4-465
Cow position:
Alignm length: 483
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 177

Conread position: 4-465
Cow position:
Alignm length: 484
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 0

Conread position: 4-465
Cow position:
Alignm length: 483
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 0

Conread position: 4-465
Cow position:
Alignm length: 483
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 89

Conread position: 4-465
Cow position:
Alignm length: 481
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 101

Conread position: 4-465
Cow position:
Alignm length: 491
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 200

Conread position: 4-465
Cow position:
Alignm length: 484
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 0

Conread position: 4-465
Cow position:
Alignm length: 482
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 171

Conread position: 4-465
Cow position:
Alignm length: 478
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 280, 33

Conread position: 4-465
Cow position:
Alignm length: 477
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 70

Conread position: 4-465
Cow position:
Alignm length: 489
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 183

Conread position: 5-364
Cow position:
Alignm length: 372
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 229

Conread position: 5-461
Cow position:
Alignm length: 476
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 283, 58

Conread position: 5-463
Cow position:
Alignm length: 487
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 100

Conread position: 5-465
Cow position:
Alignm length: 487
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 66

Conread position: 5-469
Cow position:
Alignm length: 482
Alignm identity: 314
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 12, 39

Conread position: 6-364
Cow position:
Alignm length: 371
Alignm identity: 254
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 24, 120

Conread position: 7-465
Cow position:
Alignm length: 479
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 227

Conread position: 7-465
Cow position:
Alignm length: 472
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 393

Conread position: 7-465
Cow position:
Alignm length: 484
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 283, 23

Conread position: 7-465
Cow position:
Alignm length: 477
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 200

Conread position: 8-404
Cow position:
Alignm length: 416
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 199

Conread position: 8-431
Cow position:
Alignm length: 444
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 41

Conread position: 13-465
Cow position:
Alignm length: 472
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 22

Conread position: 18-465
Cow position:
Alignm length: 466
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 267, 20

Conread position: 20-464
Cow position:
Alignm length: 466
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 207

Conread position: 23-465
Cow position:
Alignm length: 460
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 115

Conread position: 24-428
Cow position:
Alignm length: 419
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 264, 106

Conread position: 25-465
Cow position:
Alignm length: 462
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 263, 0

Conread position: 27-470
Cow position:
Alignm length: 455
Alignm identity: 291
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 5, 208

Conread position: 35-465
Cow position:
Alignm length: 452
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 151

Conread position: 46-383
Cow position:
Alignm length: 352
Alignm identity: 249
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 242, 75

Conread position: 49-465
Cow position:
Alignm length: 448
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 221, 99

Conread position: 55-465
Cow position:
Alignm length: 430
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 229, 0

Conread position: 62-465
Cow position:
Alignm length: 427
Alignm identity: 281
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 103, 66

Conread position: 64-465
Cow position:
Alignm length: 418
Alignm identity: 283
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 226, 128

Conread position: 69-352
Cow position:
Alignm length: 301
Alignm identity: 200
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 42, 36

Conread position: 72-465
Cow position:
Alignm length: 416
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 250

Conread position: 74-463
Cow position:
Alignm length: 411
Alignm identity: 282
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 59, 119

Conread position: 76-465
Cow position:
Alignm length: 406
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 208, 0

Conread position: 77-465
Cow position:
Alignm length: 416
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 62

Conread position: 80-465
Cow position:
Alignm length: 409
Alignm identity: 284
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 208, 44

Conread position: 87-384
Cow position:
Alignm length: 318
Alignm identity: 231
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 76, 111

Conread position: 102-467
Cow position:
Alignm length: 382
Alignm identity: 264
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 29, 175

Conread position: 109-463
Cow position:
Alignm length: 373
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 175, 97

Conread position: 130-349
Cow position:
Alignm length: 230
Alignm identity: 158
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 154, 0

Conread position: 130-465
Cow position:
Alignm length: 355
Alignm identity: 252
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 107, 232

Conread position: 144-465
Cow position:
Alignm length: 341
Alignm identity: 240
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 144, 0

Conread position: 145-465
Cow position:
Alignm length: 336
Alignm identity: 229
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 143, 14

Conread position: 153-465
Cow position:
Alignm length: 330
Alignm identity: 227
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 132, 66

Conread position: 153-465
Cow position:
Alignm length: 333
Alignm identity: 233
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 137, 53

Conread position: 154-465
Cow position:
Alignm length: 327
Alignm identity: 216
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 119, 54

Conread position: 155-461
Cow position:
Alignm length: 312
Alignm identity: 202
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 215, 21

Conread position: 181-420
Cow position:
Alignm length: 254
Alignm identity: 171
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 56, 0

Conread position: 193-465
Cow position:
Alignm length: 292
Alignm identity: 209
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 91, 0

Conread position: 227-465
Cow position:
Alignm length: 258
Alignm identity: 177
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 61, 0

Show alignments to all cow chromosomes.