Cow genome map


           Conread name:
           Lym2-sn24_C10.f
        

               Conread position:
               26-604
               

               Cow position:
               
               

               Alignm length:
               607
               

               Alignm identity:
               401
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 53
               

               Conread position:
               28-577
               

               Cow position:
               
               

               Alignm length:
               581
               

               Alignm identity:
               409
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 155
               

               Conread position:
               33-487
               

               Cow position:
               
               

               Alignm length:
               486
               

               Alignm identity:
               355
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 39
               

               Conread position:
               34-289
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               193
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               25, 113
               

               Conread position:
               39-429
               

               Cow position:
               
               

               Alignm length:
               420
               

               Alignm identity:
               296
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               20, 293
               

               Conread position:
               39-603
               

               Cow position:
               
               

               Alignm length:
               581
               

               Alignm identity:
               383
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               20, 56
               

               Conread position:
               40-193
               

               Cow position:
               
               

               Alignm length:
               158
               

               Alignm identity:
               118
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               114, 79
               

               Conread position:
               40-349
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               233
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               20, 143
               

               Conread position:
               40-430
               

               Cow position:
               
               

               Alignm length:
               406
               

               Alignm identity:
               294
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 146
               

               Conread position:
               40-604
               

               Cow position:
               
               

               Alignm length:
               597
               

               Alignm identity:
               371
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               20, 147
               

               Conread position:
               41-188
               

               Cow position:
               
               

               Alignm length:
               153
               

               Alignm identity:
               118
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               14, 44
               

               Conread position:
               41-412
               

               Cow position:
               
               

               Alignm length:
               394
               

               Alignm identity:
               262
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               18, 9
               

               Conread position:
               41-603
               

               Cow position:
               
               

               Alignm length:
               588
               

               Alignm identity:
               409
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 143
               

               Conread position:
               41-604
               

               Cow position:
               
               

               Alignm length:
               579
               

               Alignm identity:
               397
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 144
               

               Conread position:
               42-196
               

               Cow position:
               
               

               Alignm length:
               159
               

               Alignm identity:
               126
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               82, 70
               

               Conread position:
               42-198
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               131
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               18, 85
               

               Conread position:
               42-346
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               222
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               15, 111
               

               Conread position:
               42-604
               

               Cow position:
               
               

               Alignm length:
               591
               

               Alignm identity:
               396
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 208
               

               Conread position:
               43-409
               

               Cow position:
               
               

               Alignm length:
               395
               

               Alignm identity:
               270
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               76, 139
               

               Conread position:
               44-302
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               16, 28
               

               Conread position:
               45-409
               

               Cow position:
               
               

               Alignm length:
               378
               

               Alignm identity:
               245
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               13, 275
               

               Conread position:
               50-351
               

               Cow position:
               
               

               Alignm length:
               334
               

               Alignm identity:
               244
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               9, 134
               

               Conread position:
               58-198
               

               Cow position:
               
               

               Alignm length:
               150
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               64, 125
               

               Conread position:
               58-414
               

               Cow position:
               
               

               Alignm length:
               362
               

               Alignm identity:
               228
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               34, 64
               

               Conread position:
               60-412
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               241
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               58, 76
               

               Conread position:
               61-604
               

               Cow position:
               
               

               Alignm length:
               586
               

               Alignm identity:
               397
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 179
               

               Conread position:
               67-411
               

               Cow position:
               
               

               Alignm length:
               377
               

               Alignm identity:
               259
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               21, 269
               

               Conread position:
               76-285
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               160
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               46, 73
               

               Conread position:
               92-604
               

               Cow position:
               
               

               Alignm length:
               543
               

               Alignm identity:
               373
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 87
               

               Conread position:
               200-495
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               217
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               131, 95
               

               Conread position:
               200-557
               

               Cow position:
               
               

               Alignm length:
               362
               

               Alignm identity:
               249
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               127, 46
               

               Conread position:
               201-397
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               150
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               128, 109
               

               Conread position:
               201-410
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               128, 104
               

               Conread position:
               201-603
               

               Cow position:
               
               

               Alignm length:
               407
               

               Alignm identity:
               289
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               163, 66
               

               Conread position:
               201-604
               

               Cow position:
               
               

               Alignm length:
               409
               

               Alignm identity:
               280
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               236, 65
               

               Conread position:
               201-604
               

               Cow position:
               
               

               Alignm length:
               409
               

               Alignm identity:
               284
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               76, 81
               

               Conread position:
               203-412
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               153
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               74, 48
               

               Conread position:
               203-604
               

               Cow position:
               
               

               Alignm length:
               404
               

               Alignm identity:
               296
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               126, 107
               

               Conread position:
               215-579
               

               Cow position:
               
               

               Alignm length:
               368
               

               Alignm identity:
               248
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               176, 47
               

               Conread position:
               215-603
               

               Cow position:
               
               

               Alignm length:
               389
               

               Alignm identity:
               272
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               101, 0
               

               Conread position:
               239-604
               

               Cow position:
               
               

               Alignm length:
               373
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 71
               

               Conread position:
               241-563
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               227
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               5, 18
               

               Conread position:
               247-408
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               124
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               82, 64
               

               Conread position:
               261-604
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 53
               

               Conread position:
               274-604
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               234
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               19, 37
               

               Conread position:
               281-577
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               220
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               48, 34
               

               Conread position:
               286-572
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               196
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               43, 30
               

               Conread position:
               314-537
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               164
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               15, 42
               

               Conread position:
               328-594
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               192
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               113, 34
               

               Conread position:
               342-604
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               187
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               99, 14
               

               Conread position:
               354-604
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               192
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               86, 15
               

               Conread position:
               360-604
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               168
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               8, 14
               

               Conread position:
               362-577
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               165
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               74, 143
               

               Conread position:
               365-596
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               172
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               71, 168
               

               Conread position:
               365-604
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               37, 14
               

               Conread position:
               386-604
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               389-604
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               22, 66
               

               Conread position:
               396-592
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               137
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               36, 12
               

               Conread position:
               396-604
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               144
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               40, 81
               

               Conread position:
               400-596
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               39, 96
               

               Conread position:
               416-604
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               132
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               18, 98
               

               Conread position:
               416-604
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               136
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               24, 94
               
Show alignments to all cow chromosomes.