Cow genome map
| Conread name: | Lym2-sn24_C10.f |
| Conread position: | 31-403 |
| Cow position: | chr10:36424834-36425209 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 245 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 78, 34 |
| Conread position: | 35-603 |
| Cow position: | chr10:22455764-22455188 (view UCSC Genome Browser custom track) |
| Alignm length: | 598 |
| Alignm identity: | 421 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 72 |
| Conread position: | 38-487 |
| Cow position: | chr10:23879583-23880052 (view UCSC Genome Browser custom track) |
| Alignm length: | 485 |
| Alignm identity: | 354 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 112 |
| Conread position: | 39-328 |
| Cow position: | chr10:35182263-35181955 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 226 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 19, 144 |
| Conread position: | 39-604 |
| Cow position: | chr10:22859598-22860164 (view UCSC Genome Browser custom track) |
| Alignm length: | 587 |
| Alignm identity: | 401 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 50 |
| Conread position: | 40-193 |
| Cow position: | chr10:25536608-25536442 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 129 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 19, 144 |
| Conread position: | 40-308 |
| Cow position: | chr10:15617877-15618158 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 208 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 82, 75 |
| Conread position: | 40-532 |
| Cow position: | chr10:38472747-38472260 (view UCSC Genome Browser custom track) |
| Alignm length: | 510 |
| Alignm identity: | 345 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 16, 62 |
| Conread position: | 40-604 |
| Cow position: | chr10:3318454-3317852 (view UCSC Genome Browser custom track) |
| Alignm length: | 607 |
| Alignm identity: | 414 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 247 |
| Conread position: | 41-193 |
| Cow position: | chr10:30320983-30320826 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 17, 140 |
| Conread position: | 41-314 |
| Cow position: | chr10:17513322-17513599 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 195 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 114, 17 |
| Conread position: | 41-438 |
| Cow position: | chr10:57503969-57503566 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 265 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 76, 191 |
| Conread position: | 41-601 |
| Cow position: | chr10:767219-767782 (view UCSC Genome Browser custom track) |
| Alignm length: | 593 |
| Alignm identity: | 420 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 133 |
| Conread position: | 42-598 |
| Cow position: | chr10:43060524-43061114 (view UCSC Genome Browser custom track) |
| Alignm length: | 603 |
| Alignm identity: | 428 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 86 |
| Conread position: | 42-601 |
| Cow position: | chr10:37428114-37428682 (view UCSC Genome Browser custom track) |
| Alignm length: | 597 |
| Alignm identity: | 403 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 223 |
| Conread position: | 43-193 |
| Cow position: | chr10:5421807-5421968 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 16, 141 |
| Conread position: | 44-412 |
| Cow position: | chr10:50964294-50963923 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 252 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 15, 133 |
| Conread position: | 45-412 |
| Cow position: | chr10:29291459-29291082 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 236 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 72, 300 |
| Conread position: | 54-200 |
| Cow position: | chr10:60244172-60244019 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 68, 126 |
| Conread position: | 58-308 |
| Cow position: | chr10:25008654-25008906 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 65, 114 |
| Conread position: | 58-455 |
| Cow position: | chr10:53374753-53375140 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 280 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 66, 101 |
| Conread position: | 82-417 |
| Cow position: | chr10:1327964-1328308 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 236 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 25, 35 |
| Conread position: | 108-602 |
| Cow position: | chr10:48193198-48193686 (view UCSC Genome Browser custom track) |
| Alignm length: | 513 |
| Alignm identity: | 331 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 47, 7 |
| Conread position: | 129-486 |
| Cow position: | chr10:68980004-68979654 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 262 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 26, 49 |
| Conread position: | 189-604 |
| Cow position: | chr10:36303413-36303857 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 295 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 15, 75 |
| Conread position: | 195-313 |
| Cow position: | chr10:62629410-62629293 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 96 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 195-485 |
| Cow position: | chr10:12199402-12199114 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 56 |
| Conread position: | 200-410 |
| Cow position: | chr10:18863254-18863052 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 129, 21 |
| Conread position: | 201-460 |
| Cow position: | chr10:27223156-27222900 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 205 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 128, 109 |
| Conread position: | 201-503 |
| Cow position: | chr10:25258000-25257721 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 207 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 126, 90 |
| Conread position: | 201-596 |
| Cow position: | chr10:16668960-16669366 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 168 |
| Conread position: | 201-604 |
| Cow position: | chr10:11276053-11275642 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 126, 113 |
| Conread position: | 201-604 |
| Cow position: | chr10:68203705-68204103 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 126, 12 |
| Conread position: | 225-510 |
| Cow position: | chr10:48208426-48208705 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 212 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 104, 73 |
| Conread position: | 246-488 |
| Cow position: | chr10:60243310-60243069 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 182 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 83, 63 |
| Conread position: | 248-604 |
| Cow position: | chr10:31220363-31219989 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 258 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 94, 57 |
| Conread position: | 250-604 |
| Cow position: | chr10:1352279-1351924 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 80, 14 |
| Conread position: | 267-527 |
| Cow position: | chr10:67051014-67050759 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 185 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 27, 51 |
| Conread position: | 267-604 |
| Cow position: | chr10:28565916-28566256 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 51 |
| Conread position: | 267-604 |
| Cow position: | chr10:57404601-57404941 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 240 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 12, 49 |
| Conread position: | 302-604 |
| Cow position: | chr10:45650950-45650666 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 221 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 15, 45 |
| Conread position: | 311-584 |
| Cow position: | chr10:4994266-4994553 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 204 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 18, 200 |
| Conread position: | 329-604 |
| Cow position: | chr10:15618497-15618780 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 208 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 52, 139 |
| Conread position: | 350-604 |
| Cow position: | chr10:12875572-12875819 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 180 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 84, 9 |
| Conread position: | 360-603 |
| Cow position: | chr10:41637883-41637642 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 76, 48 |
| Conread position: | 400-604 |
| Cow position: | chr10:48312874-48313081 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 146 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 17, 112 |
Show alignments to all cow chromosomes.