Cow genome map

Conread name: Lym2-sn24_C10.f

Conread position: 38-601
Cow position: chr13:45497870-45497284 (view UCSC Genome Browser custom track)
Alignm length: 591
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 86

Conread position: 39-307
Cow position: chr13:10854411-10854702 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 205
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 80, 22

Conread position: 40-196
Cow position: chr13:57746458-57746289 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 128
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 19, 145

Conread position: 40-198
Cow position: chr13:22194015-22193849 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 131
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 19, 158

Conread position: 40-266
Cow position: chr13:48580384-48580634 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 191
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 19, 144

Conread position: 40-604
Cow position: chr13:12325692-12325134 (view UCSC Genome Browser custom track)
Alignm length: 586
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 49

Conread position: 40-604
Cow position: chr13:34264501-34265059 (view UCSC Genome Browser custom track)
Alignm length: 587
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 246

Conread position: 40-604
Cow position: chr13:37498310-37497759 (view UCSC Genome Browser custom track)
Alignm length: 580
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 73

Conread position: 41-469
Cow position: chr13:44143802-44144256 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 143

Conread position: 42-193
Cow position: chr13:18839668-18839514 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 116
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 112, 82

Conread position: 42-580
Cow position: chr13:19116010-19115474 (view UCSC Genome Browser custom track)
Alignm length: 564
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 181

Conread position: 68-259
Cow position: chr13:26034331-26034531 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 144
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 56, 112

Conread position: 70-493
Cow position: chr13:47325326-47325769 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 18

Conread position: 88-480
Cow position: chr13:17169747-17169346 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 297
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 31, 94

Conread position: 108-557
Cow position: chr13:46464291-46464746 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 70

Conread position: 119-524
Cow position: chr13:34336764-34336369 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 283
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 125, 32

Conread position: 189-406
Cow position: chr13:20656758-20656546 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 157
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 13, 122

Conread position: 189-414
Cow position: chr13:43803354-43803134 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 154
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 13, 122

Conread position: 192-412
Cow position: chr13:15731140-15731353 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 152
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 137, 118

Conread position: 195-602
Cow position: chr13:34885401-34884994 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 114

Conread position: 199-425
Cow position: chr13:14080029-14080256 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 165
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 128, 76

Conread position: 200-408
Cow position: chr13:1367359-1367574 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 156
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 115, 87

Conread position: 200-487
Cow position: chr13:25955207-25955478 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 208
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 110, 0

Conread position: 201-424
Cow position: chr13:26943222-26943003 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 169
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 128, 40

Conread position: 201-457
Cow position: chr13:21878263-21878515 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 187
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 126, 95

Conread position: 201-488
Cow position: chr13:51241142-51240868 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 109

Conread position: 201-604
Cow position: chr13:55407080-55406689 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 43

Conread position: 203-397
Cow position: chr13:24676080-24675884 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 154
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 81, 10

Conread position: 204-421
Cow position: chr13:33239931-33239716 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 155
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 69, 40

Conread position: 219-487
Cow position: chr13:30951288-30951545 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 186
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 21, 9

Conread position: 223-437
Cow position: chr13:18839323-18839113 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 164
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 106, 87

Conread position: 227-604
Cow position: chr13:39487716-39487358 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 64

Conread position: 229-498
Cow position: chr13:62271738-62271997 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 191
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 51, 55

Conread position: 234-456
Cow position: chr13:15489805-15489589 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 165
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 154, 56

Conread position: 285-498
Cow position: chr13:59997688-59997900 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 155
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 44, 25

Conread position: 295-510
Cow position: chr13:11441676-11441470 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 156
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 71, 15

Conread position: 341-488
Cow position: chr13:9103614-9103764 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 114
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 17, 73

Conread position: 362-604
Cow position: chr13:38362006-38362252 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 180
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 51, 139

Conread position: 399-604
Cow position: chr13:46349738-46349533 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 149
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 42, 171

Conread position: 404-604
Cow position: chr13:43384862-43384656 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 154
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 14, 0

Conread position: 423-604
Cow position: chr13:47591342-47591167 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 134
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 28, 0

Show alignments to all cow chromosomes.