Cow genome map


           Conread name:
           Lym2-sn24_C10.f
        

               Conread position:
               38-193
               

               Cow position:
               
               

               Alignm length:
               168
               

               Alignm identity:
               128
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               38-198
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               22, 75
               

               Conread position:
               39-560
               

               Cow position:
               
               

               Alignm length:
               560
               

               Alignm identity:
               375
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 144
               

               Conread position:
               40-196
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               135
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               18, 30
               

               Conread position:
               40-198
               

               Cow position:
               
               

               Alignm length:
               170
               

               Alignm identity:
               128
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               19, 143
               

               Conread position:
               40-416
               

               Cow position:
               
               

               Alignm length:
               395
               

               Alignm identity:
               264
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               15, 110
               

               Conread position:
               40-604
               

               Cow position:
               
               

               Alignm length:
               592
               

               Alignm identity:
               395
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 143
               

               Conread position:
               41-603
               

               Cow position:
               
               

               Alignm length:
               594
               

               Alignm identity:
               401
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 144
               

               Conread position:
               41-604
               

               Cow position:
               
               

               Alignm length:
               587
               

               Alignm identity:
               408
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 258
               

               Conread position:
               42-196
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               17, 142
               

               Conread position:
               42-434
               

               Cow position:
               
               

               Alignm length:
               421
               

               Alignm identity:
               288
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               82, 16
               

               Conread position:
               42-438
               

               Cow position:
               
               

               Alignm length:
               423
               

               Alignm identity:
               295
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 140
               

               Conread position:
               42-586
               

               Cow position:
               
               

               Alignm length:
               577
               

               Alignm identity:
               391
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 36
               

               Conread position:
               42-598
               

               Cow position:
               
               

               Alignm length:
               590
               

               Alignm identity:
               423
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 298
               

               Conread position:
               42-603
               

               Cow position:
               
               

               Alignm length:
               575
               

               Alignm identity:
               403
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 105
               

               Conread position:
               43-330
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               223
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               16, 226
               

               Conread position:
               45-498
               

               Cow position:
               
               

               Alignm length:
               463
               

               Alignm identity:
               290
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               11, 175
               

               Conread position:
               58-585
               

               Cow position:
               
               

               Alignm length:
               547
               

               Alignm identity:
               359
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               63, 28
               

               Conread position:
               60-345
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               204
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               59, 103
               

               Conread position:
               62-419
               

               Cow position:
               
               

               Alignm length:
               376
               

               Alignm identity:
               254
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               57, 142
               

               Conread position:
               67-193
               

               Cow position:
               
               

               Alignm length:
               136
               

               Alignm identity:
               107
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               51, 114
               

               Conread position:
               186-562
               

               Cow position:
               
               

               Alignm length:
               383
               

               Alignm identity:
               266
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               143, 35
               

               Conread position:
               189-604
               

               Cow position:
               
               

               Alignm length:
               423
               

               Alignm identity:
               290
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 47
               

               Conread position:
               195-410
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               156
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               7, 27
               

               Conread position:
               201-357
               

               Cow position:
               
               

               Alignm length:
               158
               

               Alignm identity:
               117
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               128, 114
               

               Conread position:
               201-391
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               143
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               128, 90
               

               Conread position:
               201-395
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               140
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               126, 109
               

               Conread position:
               201-409
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               157
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               128, 13
               

               Conread position:
               201-602
               

               Cow position:
               
               

               Alignm length:
               417
               

               Alignm identity:
               284
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               128, 113
               

               Conread position:
               201-604
               

               Cow position:
               
               

               Alignm length:
               414
               

               Alignm identity:
               281
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               133, 56
               

               Conread position:
               201-604
               

               Cow position:
               
               

               Alignm length:
               411
               

               Alignm identity:
               292
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               205, 103
               

               Conread position:
               203-600
               

               Cow position:
               
               

               Alignm length:
               411
               

               Alignm identity:
               299
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               125, 107
               

               Conread position:
               214-410
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               20, 106
               

               Conread position:
               219-564
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 68
               

               Conread position:
               272-413
               

               Cow position:
               
               

               Alignm length:
               144
               

               Alignm identity:
               112
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               57, 33
               

               Conread position:
               282-597
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               214
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               51, 28
               

               Conread position:
               311-510
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               143
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               19, 29
               

               Conread position:
               323-601
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               211
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               6, 35
               

               Conread position:
               375-603
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               165
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               29, 119
               

               Conread position:
               411-604
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               141
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               28, 11
               

               Conread position:
               440-604
               

               Cow position:
               
               

               Alignm length:
               165
               

               Alignm identity:
               117
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               18, 0
               
Show alignments to all cow chromosomes.