Cow genome map
| Conread name: | Lym2-sn24_C10.f |
| Conread position: | 38-193 |
| Cow position: | chr15:5912115-5912282 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 128 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 38-198 |
| Cow position: | chr15:41807272-41807440 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 22, 75 |
| Conread position: | 39-560 |
| Cow position: | chr15:37633633-37633080 (view UCSC Genome Browser custom track) |
| Alignm length: | 560 |
| Alignm identity: | 375 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 144 |
| Conread position: | 40-196 |
| Cow position: | chr15:16669157-16669321 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 135 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 18, 30 |
| Conread position: | 40-198 |
| Cow position: | chr15:11287119-11287287 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 128 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 19, 143 |
| Conread position: | 40-416 |
| Cow position: | chr15:4622509-4622896 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 264 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 15, 110 |
| Conread position: | 40-604 |
| Cow position: | chr15:52869085-52868515 (view UCSC Genome Browser custom track) |
| Alignm length: | 592 |
| Alignm identity: | 395 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 143 |
| Conread position: | 41-603 |
| Cow position: | chr15:53728012-53728578 (view UCSC Genome Browser custom track) |
| Alignm length: | 594 |
| Alignm identity: | 401 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 144 |
| Conread position: | 41-604 |
| Cow position: | chr15:23266041-23265468 (view UCSC Genome Browser custom track) |
| Alignm length: | 587 |
| Alignm identity: | 408 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 258 |
| Conread position: | 42-196 |
| Cow position: | chr15:52132105-52131940 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 17, 142 |
| Conread position: | 42-434 |
| Cow position: | chr15:12048487-12048890 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 288 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 82, 16 |
| Conread position: | 42-438 |
| Cow position: | chr15:579312-578896 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 140 |
| Conread position: | 42-586 |
| Cow position: | chr15:17642459-17641905 (view UCSC Genome Browser custom track) |
| Alignm length: | 577 |
| Alignm identity: | 391 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 36 |
| Conread position: | 42-598 |
| Cow position: | chr15:25683963-25683378 (view UCSC Genome Browser custom track) |
| Alignm length: | 590 |
| Alignm identity: | 423 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 298 |
| Conread position: | 42-603 |
| Cow position: | chr15:37491470-37492007 (view UCSC Genome Browser custom track) |
| Alignm length: | 575 |
| Alignm identity: | 403 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 105 |
| Conread position: | 43-330 |
| Cow position: | chr15:21802804-21802503 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 223 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 16, 226 |
| Conread position: | 45-498 |
| Cow position: | chr15:50243546-50243103 (view UCSC Genome Browser custom track) |
| Alignm length: | 463 |
| Alignm identity: | 290 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 11, 175 |
| Conread position: | 58-585 |
| Cow position: | chr15:6523200-6523729 (view UCSC Genome Browser custom track) |
| Alignm length: | 547 |
| Alignm identity: | 359 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 63, 28 |
| Conread position: | 60-345 |
| Cow position: | chr15:7443683-7443971 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 204 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 59, 103 |
| Conread position: | 62-419 |
| Cow position: | chr15:14810696-14811064 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 254 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 57, 142 |
| Conread position: | 67-193 |
| Cow position: | chr15:11997994-11997860 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 107 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 51, 114 |
| Conread position: | 186-562 |
| Cow position: | chr15:27971686-27972050 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 266 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 143, 35 |
| Conread position: | 189-604 |
| Cow position: | chr15:53712926-53712521 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 47 |
| Conread position: | 195-410 |
| Cow position: | chr15:26365499-26365297 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 7, 27 |
| Conread position: | 201-357 |
| Cow position: | chr15:36864479-36864633 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 117 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 128, 114 |
| Conread position: | 201-391 |
| Cow position: | chr15:35042457-35042276 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 143 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 128, 90 |
| Conread position: | 201-395 |
| Cow position: | chr15:45665715-45665527 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 140 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 126, 109 |
| Conread position: | 201-409 |
| Cow position: | chr15:16669350-16669554 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 157 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 128, 13 |
| Conread position: | 201-602 |
| Cow position: | chr15:44797189-44797600 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 128, 113 |
| Conread position: | 201-604 |
| Cow position: | chr15:10581485-10581084 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 281 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 133, 56 |
| Conread position: | 201-604 |
| Cow position: | chr15:37469890-37470279 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 205, 103 |
| Conread position: | 203-600 |
| Cow position: | chr15:9072774-9072371 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 107 |
| Conread position: | 214-410 |
| Cow position: | chr15:14974042-14974237 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 20, 106 |
| Conread position: | 219-564 |
| Cow position: | chr15:11997813-11997458 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 68 |
| Conread position: | 272-413 |
| Cow position: | chr15:5912442-5912579 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 112 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 57, 33 |
| Conread position: | 282-597 |
| Cow position: | chr15:31917985-31918279 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 214 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 51, 28 |
| Conread position: | 311-510 |
| Cow position: | chr15:4721502-4721312 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 143 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 19, 29 |
| Conread position: | 323-601 |
| Cow position: | chr15:40065907-40065621 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 211 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 6, 35 |
| Conread position: | 375-603 |
| Cow position: | chr15:4623321-4623554 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 165 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 29, 119 |
| Conread position: | 411-604 |
| Cow position: | chr15:39288190-39288387 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 141 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 28, 11 |
| Conread position: | 440-604 |
| Cow position: | chr15:21802258-21802095 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 18, 0 |
Show alignments to all cow chromosomes.