Cow genome map
| Conread name: | Lym2-sn24_C10.f |
| Conread position: | 31-603 |
| Cow position: | chr16:23034693-23035278 (view UCSC Genome Browser custom track) |
| Alignm length: | 602 |
| Alignm identity: | 420 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 16 |
| Conread position: | 33-604 |
| Cow position: | chr16:15509528-15508954 (view UCSC Genome Browser custom track) |
| Alignm length: | 600 |
| Alignm identity: | 413 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 15 |
| Conread position: | 35-604 |
| Cow position: | chr16:43850225-43850813 (view UCSC Genome Browser custom track) |
| Alignm length: | 606 |
| Alignm identity: | 416 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 308 |
| Conread position: | 36-500 |
| Cow position: | chr16:5131182-5131636 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 317 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 19, 12 |
| Conread position: | 39-278 |
| Cow position: | chr16:47069721-47069482 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 22, 43 |
| Conread position: | 40-198 |
| Cow position: | chr16:31374308-31374481 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 40-349 |
| Cow position: | chr16:52649921-52650255 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 236 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 15, 298 |
| Conread position: | 40-604 |
| Cow position: | chr16:47781900-47781314 (view UCSC Genome Browser custom track) |
| Alignm length: | 594 |
| Alignm identity: | 397 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 145 |
| Conread position: | 41-356 |
| Cow position: | chr16:2371222-2371541 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 243 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 115, 46 |
| Conread position: | 41-427 |
| Cow position: | chr16:48894229-48894629 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 146 |
| Conread position: | 41-550 |
| Cow position: | chr16:53516053-53516560 (view UCSC Genome Browser custom track) |
| Alignm length: | 525 |
| Alignm identity: | 356 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 149 |
| Conread position: | 42-196 |
| Cow position: | chr16:2722448-2722613 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 19, 127 |
| Conread position: | 42-604 |
| Cow position: | chr16:12242957-12243542 (view UCSC Genome Browser custom track) |
| Alignm length: | 596 |
| Alignm identity: | 402 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 240 |
| Conread position: | 42-604 |
| Cow position: | chr16:13044442-13043837 (view UCSC Genome Browser custom track) |
| Alignm length: | 610 |
| Alignm identity: | 408 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 299 |
| Conread position: | 42-604 |
| Cow position: | chr16:14799145-14799723 (view UCSC Genome Browser custom track) |
| Alignm length: | 593 |
| Alignm identity: | 421 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 294 |
| Conread position: | 42-604 |
| Cow position: | chr16:22785449-22786027 (view UCSC Genome Browser custom track) |
| Alignm length: | 587 |
| Alignm identity: | 405 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 142 |
| Conread position: | 42-604 |
| Cow position: | chr16:41680166-41680752 (view UCSC Genome Browser custom track) |
| Alignm length: | 595 |
| Alignm identity: | 431 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 298 |
| Conread position: | 45-604 |
| Cow position: | chr16:4294938-4295509 (view UCSC Genome Browser custom track) |
| Alignm length: | 582 |
| Alignm identity: | 406 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 76 |
| Conread position: | 80-266 |
| Cow position: | chr16:11161919-11161730 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 135 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 39, 68 |
| Conread position: | 189-349 |
| Cow position: | chr16:23878762-23878607 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 120 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 201-462 |
| Cow position: | chr16:42406268-42406010 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 193 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 128, 109 |
| Conread position: | 201-586 |
| Cow position: | chr16:16118864-16118490 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 128, 109 |
| Conread position: | 201-603 |
| Cow position: | chr16:30572221-30572596 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 124, 109 |
| Conread position: | 213-485 |
| Cow position: | chr16:47391433-47391177 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 209 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 96 |
| Conread position: | 215-413 |
| Cow position: | chr16:45057802-45057608 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 146 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 114, 95 |
| Conread position: | 222-564 |
| Cow position: | chr16:14444297-14443966 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 214, 88 |
| Conread position: | 222-572 |
| Cow position: | chr16:31374786-31375127 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 109, 64 |
| Conread position: | 226-603 |
| Cow position: | chr16:29204670-29205023 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 264 |
| Alignm E-value: | 9.00054e-42 |
| Alignm gaps (pig, cow): | 103, 20 |
| Conread position: | 234-604 |
| Cow position: | chr16:17867110-17867466 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 57 |
| Conread position: | 252-412 |
| Cow position: | chr16:12473678-12473523 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 276-604 |
| Cow position: | chr16:19153044-19152712 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 245 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 53, 5 |
| Conread position: | 286-592 |
| Cow position: | chr16:36910710-36911015 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 9 |
| Conread position: | 288-497 |
| Cow position: | chr16:2731820-2732018 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 41, 26 |
| Conread position: | 298-604 |
| Cow position: | chr16:4856165-4856470 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 226 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 107, 46 |
| Conread position: | 311-553 |
| Cow position: | chr16:11161708-11161480 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 182 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 16, 32 |
| Conread position: | 311-599 |
| Cow position: | chr16:56373942-56374236 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 207 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 21, 43 |
| Conread position: | 311-602 |
| Cow position: | chr16:37441824-37442095 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 209 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 15, 46 |
| Conread position: | 317-604 |
| Cow position: | chr16:341555-341282 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 201 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 12, 51 |
| Conread position: | 319-604 |
| Cow position: | chr16:15734869-15734588 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 204 |
| Alignm E-value: | 8.99998e-41 |
| Alignm gaps (pig, cow): | 10, 33 |
| Conread position: | 363-604 |
| Cow position: | chr16:45552082-45551853 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 371-551 |
| Cow position: | chr16:2375759-2375945 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 131 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 36, 128 |
| Conread position: | 374-601 |
| Cow position: | chr16:52813941-52814156 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 68, 24 |
| Conread position: | 400-587 |
| Cow position: | chr16:23747380-23747567 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 36, 120 |
| Conread position: | 408-604 |
| Cow position: | chr16:45157269-45157461 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 33, 88 |
| Conread position: | 437-601 |
| Cow position: | chr16:16558836-16559000 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.