Cow genome map
| Conread name: | Lym2-sn24_C10.f |
| Conread position: | 40-193 |
| Cow position: | chr18:16259831-16259667 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 125 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 19, 144 |
| Conread position: | 40-197 |
| Cow position: | chr18:48952829-48952669 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 15, 88 |
| Conread position: | 40-488 |
| Cow position: | chr18:53029258-53028802 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 318 |
| Alignm E-value: | 9.00054e-42 |
| Alignm gaps (pig, cow): | 85, 18 |
| Conread position: | 41-496 |
| Cow position: | chr18:23316229-23316680 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 320 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 18, 157 |
| Conread position: | 41-604 |
| Cow position: | chr18:22064816-22065362 (view UCSC Genome Browser custom track) |
| Alignm length: | 583 |
| Alignm identity: | 395 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 275 |
| Conread position: | 41-604 |
| Cow position: | chr18:32861215-32860642 (view UCSC Genome Browser custom track) |
| Alignm length: | 595 |
| Alignm identity: | 430 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 255 |
| Conread position: | 42-398 |
| Cow position: | chr18:14804146-14804509 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 247 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 17, 47 |
| Conread position: | 42-504 |
| Cow position: | chr18:1701146-1700676 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 360 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 145 |
| Conread position: | 43-388 |
| Cow position: | chr18:16147611-16147961 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 233 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 15, 99 |
| Conread position: | 44-562 |
| Cow position: | chr18:27405446-27404929 (view UCSC Genome Browser custom track) |
| Alignm length: | 542 |
| Alignm identity: | 366 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 69 |
| Conread position: | 46-196 |
| Cow position: | chr18:28086137-28085977 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 9, 139 |
| Conread position: | 97-604 |
| Cow position: | chr18:29225184-29224678 (view UCSC Genome Browser custom track) |
| Alignm length: | 533 |
| Alignm identity: | 357 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 38, 27 |
| Conread position: | 128-410 |
| Cow position: | chr18:37493502-37493230 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 190 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 27, 34 |
| Conread position: | 189-465 |
| Cow position: | chr18:16259652-16259383 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 203 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 13, 127 |
| Conread position: | 201-349 |
| Cow position: | chr18:53047679-53047824 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 119 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 128, 112 |
| Conread position: | 201-381 |
| Cow position: | chr18:16539290-16539115 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 109, 0 |
| Conread position: | 201-405 |
| Cow position: | chr18:21290396-21290593 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 151 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 126, 114 |
| Conread position: | 201-414 |
| Cow position: | chr18:50880857-50880652 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 211, 12 |
| Conread position: | 201-498 |
| Cow position: | chr18:22433410-22433699 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 216 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 37, 75 |
| Conread position: | 202-603 |
| Cow position: | chr18:28085949-28085558 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 128, 46 |
| Conread position: | 204-412 |
| Cow position: | chr18:33896214-33896010 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 150 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 123, 106 |
| Conread position: | 254-498 |
| Cow position: | chr18:23504268-23504512 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 73, 56 |
| Conread position: | 274-603 |
| Cow position: | chr18:48550291-48549973 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 7 |
| Conread position: | 281-603 |
| Cow position: | chr18:8170484-8170172 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 230 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 48, 24 |
| Conread position: | 311-529 |
| Cow position: | chr18:35471520-35471744 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 22, 104 |
| Conread position: | 316-587 |
| Cow position: | chr18:8204797-8204529 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 181 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 13, 47 |
| Conread position: | 369-604 |
| Cow position: | chr18:31393804-31393576 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 170 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 209, 39 |
| Conread position: | 400-604 |
| Cow position: | chr18:23669074-23669284 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 416-602 |
| Cow position: | chr18:11367582-11367767 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 25, 44 |
Show alignments to all cow chromosomes.