Cow genome map
| Conread name: | Lym2-sn24_C10.f |
| Conread position: | 23-604 |
| Cow position: | chr2:33790866-33791463 (view UCSC Genome Browser custom track) |
| Alignm length: | 610 |
| Alignm identity: | 415 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 9 |
| Conread position: | 36-604 |
| Cow position: | chr2:77967942-77968485 (view UCSC Genome Browser custom track) |
| Alignm length: | 576 |
| Alignm identity: | 394 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 93 |
| Conread position: | 38-410 |
| Cow position: | chr2:4830231-4830610 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 251 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 15, 265 |
| Conread position: | 40-193 |
| Cow position: | chr2:62463392-62463556 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 125 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 19, 144 |
| Conread position: | 40-289 |
| Cow position: | chr2:83835955-83835706 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 169 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 15, 53 |
| Conread position: | 40-308 |
| Cow position: | chr2:13685190-13684903 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 212 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 19, 110 |
| Conread position: | 40-603 |
| Cow position: | chr2:21697126-21697715 (view UCSC Genome Browser custom track) |
| Alignm length: | 599 |
| Alignm identity: | 403 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 87 |
| Conread position: | 40-604 |
| Cow position: | chr2:74387527-74388104 (view UCSC Genome Browser custom track) |
| Alignm length: | 601 |
| Alignm identity: | 418 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 143 |
| Conread position: | 41-320 |
| Cow position: | chr2:18760082-18759787 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 210 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 18, 142 |
| Conread position: | 41-362 |
| Cow position: | chr2:68962511-68962839 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 227 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 14, 77 |
| Conread position: | 41-488 |
| Cow position: | chr2:7778888-7779363 (view UCSC Genome Browser custom track) |
| Alignm length: | 486 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 110 |
| Conread position: | 41-506 |
| Cow position: | chr2:47746818-47746339 (view UCSC Genome Browser custom track) |
| Alignm length: | 494 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 54 |
| Conread position: | 41-603 |
| Cow position: | chr2:72599414-72598822 (view UCSC Genome Browser custom track) |
| Alignm length: | 605 |
| Alignm identity: | 416 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 143 |
| Conread position: | 42-331 |
| Cow position: | chr2:12776979-12777291 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 215 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 43-313 |
| Cow position: | chr2:52183545-52183253 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 217 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 16, 276 |
| Conread position: | 43-604 |
| Cow position: | chr2:63287558-63288134 (view UCSC Genome Browser custom track) |
| Alignm length: | 595 |
| Alignm identity: | 398 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 108 |
| Conread position: | 45-425 |
| Cow position: | chr2:13048799-13048411 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 140 |
| Conread position: | 58-300 |
| Cow position: | chr2:69982935-69982681 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 184 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 64, 17 |
| Conread position: | 58-498 |
| Cow position: | chr2:42285941-42286394 (view UCSC Genome Browser custom track) |
| Alignm length: | 465 |
| Alignm identity: | 309 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 82, 66 |
| Conread position: | 67-604 |
| Cow position: | chr2:41491211-41490664 (view UCSC Genome Browser custom track) |
| Alignm length: | 572 |
| Alignm identity: | 385 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 11 |
| Conread position: | 77-604 |
| Cow position: | chr2:32393947-32393430 (view UCSC Genome Browser custom track) |
| Alignm length: | 550 |
| Alignm identity: | 380 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 40 |
| Conread position: | 78-341 |
| Cow position: | chr2:80603768-80604056 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 211 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 41, 260 |
| Conread position: | 91-604 |
| Cow position: | chr2:53716441-53716965 (view UCSC Genome Browser custom track) |
| Alignm length: | 539 |
| Alignm identity: | 378 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 197 |
| Conread position: | 193-604 |
| Cow position: | chr2:43344871-43345275 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 8 |
| Conread position: | 193-604 |
| Cow position: | chr2:71121444-71121043 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 27 |
| Conread position: | 197-454 |
| Cow position: | chr2:37003714-37003463 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 195 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 7, 114 |
| Conread position: | 201-424 |
| Cow position: | chr2:20281906-20281682 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 161 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 106, 187 |
| Conread position: | 201-563 |
| Cow position: | chr2:7212208-7211851 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 81 |
| Conread position: | 208-424 |
| Cow position: | chr2:65463153-65463364 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 110, 0 |
| Conread position: | 214-604 |
| Cow position: | chr2:62673848-62674223 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 133, 17 |
| Conread position: | 240-572 |
| Cow position: | chr2:18249508-18249835 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 196, 68 |
| Conread position: | 241-604 |
| Cow position: | chr2:64073930-64073565 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 74 |
| Conread position: | 251-476 |
| Cow position: | chr2:24884359-24884136 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 159 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 78, 61 |
| Conread position: | 255-483 |
| Cow position: | chr2:3296549-3296334 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 181, 58 |
| Conread position: | 271-596 |
| Cow position: | chr2:33825599-33825909 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 217 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 19, 43 |
| Conread position: | 297-604 |
| Cow position: | chr2:76055233-76055539 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 59 |
| Conread position: | 319-604 |
| Cow position: | chr2:27145055-27145350 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 206 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 10, 39 |
| Conread position: | 410-604 |
| Cow position: | chr2:66435492-66435301 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 29, 53 |
| Conread position: | 414-604 |
| Cow position: | chr2:69982621-69982435 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 27, 65 |
| Conread position: | 432-604 |
| Cow position: | chr2:46140978-46141149 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 458-603 |
| Cow position: | chr2:19749768-19749623 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 51, 56 |
Show alignments to all cow chromosomes.