Cow genome map

Conread name: Lym2-sn24_C10.f

Conread position: 20-598
Cow position: chr21:26631781-26632357 (view UCSC Genome Browser custom track)
Alignm length: 609
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 159

Conread position: 40-193
Cow position: chr21:28651004-28650843 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 123
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 19, 59

Conread position: 40-415
Cow position: chr21:26741864-26742236 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 274
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 19, 217

Conread position: 40-604
Cow position: chr21:45448244-45447669 (view UCSC Genome Browser custom track)
Alignm length: 589
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 254

Conread position: 41-198
Cow position: chr21:27678674-27678505 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 127
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 19, 143

Conread position: 41-466
Cow position: chr21:39074823-39075276 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 319
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 18, 85

Conread position: 41-604
Cow position: chr21:16165997-16166560 (view UCSC Genome Browser custom track)
Alignm length: 580
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 13

Conread position: 42-441
Cow position: chr21:45963059-45962637 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 294
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 13, 142

Conread position: 42-604
Cow position: chr21:37356294-37355757 (view UCSC Genome Browser custom track)
Alignm length: 578
Alignm identity: 387
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 13, 39

Conread position: 43-403
Cow position: chr21:6667849-6667475 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 267
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 16, 74

Conread position: 48-603
Cow position: chr21:24971974-24972524 (view UCSC Genome Browser custom track)
Alignm length: 569
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 120

Conread position: 83-411
Cow position: chr21:37341556-37341886 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 220
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 39, 235

Conread position: 88-604
Cow position: chr21:15543337-15543871 (view UCSC Genome Browser custom track)
Alignm length: 547
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 207

Conread position: 154-488
Cow position: chr21:40442074-40442419 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 244
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 43, 19

Conread position: 154-601
Cow position: chr21:25019398-25018948 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 19

Conread position: 193-603
Cow position: chr21:5597624-5597233 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 276
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 5, 29

Conread position: 195-313
Cow position: chr21:29643882-29643998 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 93
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 18, 0

Conread position: 201-440
Cow position: chr21:27089646-27089881 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 173
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 126, 80

Conread position: 201-603
Cow position: chr21:23399439-23399035 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 12

Conread position: 201-604
Cow position: chr21:1991757-1991367 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 14

Conread position: 214-604
Cow position: chr21:8273078-8273484 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 286
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 115, 24

Conread position: 229-440
Cow position: chr21:32813692-32813898 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 146
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 98, 80

Conread position: 246-598
Cow position: chr21:39766265-39765922 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 248
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 69, 113

Conread position: 273-604
Cow position: chr21:6280696-6280371 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 232
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 139, 34

Conread position: 292-603
Cow position: chr21:33974887-33974574 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 221
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 37, 22

Conread position: 347-604
Cow position: chr21:24944551-24944815 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 186
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 62, 0

Conread position: 401-604
Cow position: chr21:33293001-33292795 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 149
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 35, 0

Conread position: 458-604
Cow position: chr21:37941459-37941605 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 112
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 104, 62

Show alignments to all cow chromosomes.