Cow genome map
| Conread name: | Lym2-sn24_C10.f |
| Conread position: | 29-562 |
| Cow position: | chr24:6423487-6424019 (view UCSC Genome Browser custom track) |
| Alignm length: | 554 |
| Alignm identity: | 376 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 30 |
| Conread position: | 38-198 |
| Cow position: | chr24:42338962-42338792 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 21, 146 |
| Conread position: | 38-460 |
| Cow position: | chr24:17417665-17417214 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 313 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 21, 50 |
| Conread position: | 40-193 |
| Cow position: | chr24:42817840-42817681 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 19, 28 |
| Conread position: | 40-474 |
| Cow position: | chr24:32579750-32579301 (view UCSC Genome Browser custom track) |
| Alignm length: | 460 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 44 |
| Conread position: | 40-535 |
| Cow position: | chr24:31301102-31301598 (view UCSC Genome Browser custom track) |
| Alignm length: | 529 |
| Alignm identity: | 361 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 18, 144 |
| Conread position: | 42-497 |
| Cow position: | chr24:35835462-35835919 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 139 |
| Conread position: | 43-488 |
| Cow position: | chr24:14913005-14913458 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 101 |
| Conread position: | 43-600 |
| Cow position: | chr24:6177972-6177392 (view UCSC Genome Browser custom track) |
| Alignm length: | 585 |
| Alignm identity: | 408 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 139 |
| Conread position: | 44-604 |
| Cow position: | chr24:37385800-37386353 (view UCSC Genome Browser custom track) |
| Alignm length: | 573 |
| Alignm identity: | 390 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 136 |
| Conread position: | 67-599 |
| Cow position: | chr24:25246579-25246034 (view UCSC Genome Browser custom track) |
| Alignm length: | 567 |
| Alignm identity: | 385 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 21 |
| Conread position: | 81-488 |
| Cow position: | chr24:9866937-9867368 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 296 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 17, 202 |
| Conread position: | 189-604 |
| Cow position: | chr24:43350698-43351105 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 64 |
| Conread position: | 192-574 |
| Cow position: | chr24:38644022-38643635 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 119 |
| Conread position: | 200-349 |
| Cow position: | chr24:21714810-21714958 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 128, 8 |
| Conread position: | 201-411 |
| Cow position: | chr24:22839218-22839423 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 154 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 95, 107 |
| Conread position: | 201-454 |
| Cow position: | chr24:15475076-15474835 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 188 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 128, 45 |
| Conread position: | 201-604 |
| Cow position: | chr24:17762881-17763273 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 128, 21 |
| Conread position: | 202-599 |
| Cow position: | chr24:36853736-36853320 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 280 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 77, 320 |
| Conread position: | 203-601 |
| Cow position: | chr24:19961131-19961514 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 126, 12 |
| Conread position: | 203-602 |
| Cow position: | chr24:42817648-42817254 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 10 |
| Conread position: | 210-592 |
| Cow position: | chr24:25343439-25343065 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 78 |
| Conread position: | 219-604 |
| Cow position: | chr24:41404958-41405321 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 272 |
| Alignm E-value: | 8.96831e-44 |
| Alignm gaps (pig, cow): | 62, 57 |
| Conread position: | 228-495 |
| Cow position: | chr24:36550996-36551255 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 191 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 249-604 |
| Cow position: | chr24:7039101-7038755 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 61 |
| Conread position: | 267-488 |
| Cow position: | chr24:25934726-25934513 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 157 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 11, 17 |
| Conread position: | 285-604 |
| Cow position: | chr24:19627636-19627322 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 225 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 156, 28 |
| Conread position: | 314-487 |
| Cow position: | chr24:1296774-1296948 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 15, 40 |
| Conread position: | 379-604 |
| Cow position: | chr24:43492289-43492511 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 169 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 62, 126 |
| Conread position: | 399-604 |
| Cow position: | chr24:6665243-6665450 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 400-595 |
| Cow position: | chr24:26846061-26846259 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 138 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 41, 116 |
Show alignments to all cow chromosomes.