Cow genome map


           Conread name:
           Lym2-sn24_C10.f
        

               Conread position:
               22-394
               

               Cow position:
               
               

               Alignm length:
               407
               

               Alignm identity:
               276
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               37, 25
               

               Conread position:
               38-355
               

               Cow position:
               
               

               Alignm length:
               350
               

               Alignm identity:
               254
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               15, 281
               

               Conread position:
               39-394
               

               Cow position:
               
               

               Alignm length:
               383
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 146
               

               Conread position:
               40-185
               

               Cow position:
               
               

               Alignm length:
               154
               

               Alignm identity:
               117
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               19, 106
               

               Conread position:
               40-278
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               188
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               19, 138
               

               Conread position:
               40-311
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               200
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               40-356
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               231
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               19, 110
               

               Conread position:
               40-375
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               238
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               19, 55
               

               Conread position:
               40-427
               

               Cow position:
               
               

               Alignm length:
               417
               

               Alignm identity:
               293
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 50
               

               Conread position:
               40-587
               

               Cow position:
               
               

               Alignm length:
               578
               

               Alignm identity:
               400
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 107
               

               Conread position:
               40-604
               

               Cow position:
               
               

               Alignm length:
               601
               

               Alignm identity:
               419
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 145
               

               Conread position:
               41-193
               

               Cow position:
               
               

               Alignm length:
               159
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               18, 135
               

               Conread position:
               41-266
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               173
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               41-274
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               192
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               18, 133
               

               Conread position:
               41-307
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               207
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               19, 55
               

               Conread position:
               41-411
               

               Cow position:
               
               

               Alignm length:
               386
               

               Alignm identity:
               254
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               18, 140
               

               Conread position:
               41-592
               

               Cow position:
               
               

               Alignm length:
               570
               

               Alignm identity:
               374
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 135
               

               Conread position:
               43-193
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               126
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               12, 141
               

               Conread position:
               43-331
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               210
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               16, 285
               

               Conread position:
               44-197
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               126
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               15, 140
               

               Conread position:
               45-313
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               214
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               10, 44
               

               Conread position:
               47-430
               

               Cow position:
               
               

               Alignm length:
               420
               

               Alignm identity:
               290
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               13, 103
               

               Conread position:
               48-604
               

               Cow position:
               
               

               Alignm length:
               594
               

               Alignm identity:
               412
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 135
               

               Conread position:
               52-406
               

               Cow position:
               
               

               Alignm length:
               381
               

               Alignm identity:
               265
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               12, 52
               

               Conread position:
               58-197
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               119
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               61, 123
               

               Conread position:
               58-197
               

               Cow position:
               
               

               Alignm length:
               145
               

               Alignm identity:
               112
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               61, 121
               

               Conread position:
               58-412
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               232
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               97, 57
               

               Conread position:
               58-434
               

               Cow position:
               
               

               Alignm length:
               404
               

               Alignm identity:
               285
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               34, 44
               

               Conread position:
               59-347
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               217
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               60, 118
               

               Conread position:
               62-401
               

               Cow position:
               
               

               Alignm length:
               351
               

               Alignm identity:
               228
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               63, 257
               

               Conread position:
               69-604
               

               Cow position:
               
               

               Alignm length:
               575
               

               Alignm identity:
               382
               

               Alignm E-value:
               6.02558e-44
               

               Alignm gaps (pig, cow):
               86, 34
               

               Conread position:
               77-313
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               42, 125
               

               Conread position:
               108-410
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               228
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               47, 7
               

               Conread position:
               115-488
               

               Cow position:
               
               

               Alignm length:
               390
               

               Alignm identity:
               262
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               28, 63
               

               Conread position:
               154-604
               

               Cow position:
               
               

               Alignm length:
               461
               

               Alignm identity:
               309
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               45, 19
               

               Conread position:
               195-350
               

               Cow position:
               
               

               Alignm length:
               159
               

               Alignm identity:
               123
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               7, 116
               

               Conread position:
               195-604
               

               Cow position:
               
               

               Alignm length:
               421
               

               Alignm identity:
               311
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 20
               

               Conread position:
               197-480
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               197
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               24, 11
               

               Conread position:
               197-604
               

               Cow position:
               
               

               Alignm length:
               418
               

               Alignm identity:
               293
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 85
               

               Conread position:
               200-488
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               204
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               27, 81
               

               Conread position:
               200-489
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               214
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               129, 54
               

               Conread position:
               201-409
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               157
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               29, 80
               

               Conread position:
               201-573
               

               Cow position:
               
               

               Alignm length:
               397
               

               Alignm identity:
               269
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               80, 128
               

               Conread position:
               201-604
               

               Cow position:
               
               

               Alignm length:
               407
               

               Alignm identity:
               287
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               126, 10
               

               Conread position:
               201-604
               

               Cow position:
               
               

               Alignm length:
               406
               

               Alignm identity:
               283
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 116
               

               Conread position:
               201-604
               

               Cow position:
               
               

               Alignm length:
               406
               

               Alignm identity:
               280
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               128, 65
               

               Conread position:
               204-406
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               145
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               123, 45
               

               Conread position:
               204-604
               

               Cow position:
               
               

               Alignm length:
               405
               

               Alignm identity:
               274
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               129, 22
               

               Conread position:
               223-604
               

               Cow position:
               
               

               Alignm length:
               394
               

               Alignm identity:
               289
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 96
               

               Conread position:
               227-603
               

               Cow position:
               
               

               Alignm length:
               391
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               102, 77
               

               Conread position:
               231-406
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               96, 58
               

               Conread position:
               314-604
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               222
               

               Alignm E-value:
               6.02558e-44
               

               Alignm gaps (pig, cow):
               15, 41
               

               Conread position:
               339-604
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               202
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               73, 132
               

               Conread position:
               358-604
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               182
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               83, 29
               

               Conread position:
               359-604
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               178
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               368-557
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               136
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               73, 26
               

               Conread position:
               380-604
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               57, 28
               

               Conread position:
               395-602
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               395-604
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               403-603
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               38, 97
               

               Conread position:
               419-597
               

               Cow position:
               
               

               Alignm length:
               179
               

               Alignm identity:
               133
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               17, 0
               
Show alignments to all cow chromosomes.