Cow genome map
| Conread name: | Lym2-sn24_C10.f |
| Conread position: | 23-603 |
| Cow position: | chr4:6629727-6630281 (view UCSC Genome Browser custom track) |
| Alignm length: | 591 |
| Alignm identity: | 385 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 36, 12 |
| Conread position: | 38-349 |
| Cow position: | chr4:22506795-22507126 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 244 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 11, 89 |
| Conread position: | 40-196 |
| Cow position: | chr4:34043014-34043181 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 131 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 19, 144 |
| Conread position: | 40-198 |
| Cow position: | chr4:2443309-2443474 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 19, 140 |
| Conread position: | 40-198 |
| Cow position: | chr4:31002768-31002937 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 133 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 40-577 |
| Cow position: | chr4:53641899-53641356 (view UCSC Genome Browser custom track) |
| Alignm length: | 565 |
| Alignm identity: | 387 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 143 |
| Conread position: | 40-597 |
| Cow position: | chr4:39647242-39646684 (view UCSC Genome Browser custom track) |
| Alignm length: | 577 |
| Alignm identity: | 395 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 45 |
| Conread position: | 41-604 |
| Cow position: | chr4:5188422-5189003 (view UCSC Genome Browser custom track) |
| Alignm length: | 599 |
| Alignm identity: | 426 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 101 |
| Conread position: | 41-604 |
| Cow position: | chr4:41975136-41975708 (view UCSC Genome Browser custom track) |
| Alignm length: | 590 |
| Alignm identity: | 408 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 261 |
| Conread position: | 42-376 |
| Cow position: | chr4:5784299-5783956 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 101 |
| Conread position: | 42-510 |
| Cow position: | chr4:57221631-57222125 (view UCSC Genome Browser custom track) |
| Alignm length: | 507 |
| Alignm identity: | 336 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 17, 252 |
| Conread position: | 42-604 |
| Cow position: | chr4:9822733-9822156 (view UCSC Genome Browser custom track) |
| Alignm length: | 598 |
| Alignm identity: | 402 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 47 |
| Conread position: | 47-274 |
| Cow position: | chr4:31586025-31586273 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 11, 137 |
| Conread position: | 53-467 |
| Cow position: | chr4:60639643-60640066 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 293 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 71, 127 |
| Conread position: | 56-455 |
| Cow position: | chr4:60662963-60662555 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 286 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 68, 124 |
| Conread position: | 58-386 |
| Cow position: | chr4:20291248-20290915 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 221 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 56, 102 |
| Conread position: | 59-412 |
| Cow position: | chr4:68106802-68107165 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 257 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 31, 10 |
| Conread position: | 67-604 |
| Cow position: | chr4:29067095-29067636 (view UCSC Genome Browser custom track) |
| Alignm length: | 558 |
| Alignm identity: | 401 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 41 |
| Conread position: | 81-454 |
| Cow position: | chr4:21163193-21162792 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 276 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 38, 101 |
| Conread position: | 119-359 |
| Cow position: | chr4:13926181-13926415 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 36, 16 |
| Conread position: | 133-597 |
| Cow position: | chr4:14564435-14564900 (view UCSC Genome Browser custom track) |
| Alignm length: | 480 |
| Alignm identity: | 316 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 22, 88 |
| Conread position: | 198-510 |
| Cow position: | chr4:6793765-6793461 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 225 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 131, 6 |
| Conread position: | 201-361 |
| Cow position: | chr4:24713258-24713414 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 124 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 128, 109 |
| Conread position: | 201-372 |
| Cow position: | chr4:36759678-36759502 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 48, 95 |
| Conread position: | 201-413 |
| Cow position: | chr4:58432571-58432770 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 153 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 128, 43 |
| Conread position: | 201-603 |
| Cow position: | chr4:34043220-34043617 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 128, 109 |
| Conread position: | 201-603 |
| Cow position: | chr4:47511426-47511031 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 128, 109 |
| Conread position: | 205-590 |
| Cow position: | chr4:59565940-59565556 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 128, 105 |
| Conread position: | 218-510 |
| Cow position: | chr4:46875110-46875423 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 233 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 13, 75 |
| Conread position: | 221-588 |
| Cow position: | chr4:4300919-4300553 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 114, 89 |
| Conread position: | 238-562 |
| Cow position: | chr4:27444206-27443880 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 72 |
| Conread position: | 238-600 |
| Cow position: | chr4:17176509-17176161 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 251 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 96, 53 |
| Conread position: | 242-604 |
| Cow position: | chr4:58832854-58833209 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 253 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 87, 56 |
| Conread position: | 250-604 |
| Cow position: | chr4:29222164-29222515 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 105 |
| Conread position: | 277-604 |
| Cow position: | chr4:8597360-8597684 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 33 |
| Conread position: | 281-604 |
| Cow position: | chr4:31586499-31586817 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 26 |
| Conread position: | 284-503 |
| Cow position: | chr4:51905481-51905272 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 168 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 45, 26 |
| Conread position: | 286-525 |
| Cow position: | chr4:60159387-60159626 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 171 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 44, 24 |
| Conread position: | 320-488 |
| Cow position: | chr4:32749513-32749335 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 132 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 9, 43 |
| Conread position: | 369-604 |
| Cow position: | chr4:57652479-57652248 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 178 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 70, 9 |
| Conread position: | 375-604 |
| Cow position: | chr4:20925752-20925974 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 65, 17 |
| Conread position: | 400-604 |
| Cow position: | chr4:45114398-45114596 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 425-604 |
| Cow position: | chr4:53762938-53763116 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 129 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 14, 116 |
| Conread position: | 441-599 |
| Cow position: | chr4:58856584-58856740 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 100, 0 |
| Conread position: | 448-604 |
| Cow position: | chr4:5623039-5623192 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 45, 0 |
Show alignments to all cow chromosomes.