Cow genome map
Conread name: | Lym2-sn24_C10.f |
Conread position: | 10-354 |
Cow position: | chr5:67463864-67463497 (view UCSC Genome Browser custom track) |
Alignm length: | 377 |
Alignm identity: | 266 |
Alignm E-value: | 6e-35 |
Alignm gaps (pig, cow): | 16, 304 |
Conread position: | 25-198 |
Cow position: | chr5:31551461-31551283 (view UCSC Genome Browser custom track) |
Alignm length: | 181 |
Alignm identity: | 134 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 34, 13 |
Conread position: | 35-197 |
Cow position: | chr5:5830571-5830736 (view UCSC Genome Browser custom track) |
Alignm length: | 171 |
Alignm identity: | 127 |
Alignm E-value: | 4e-21 |
Alignm gaps (pig, cow): | 23, 87 |
Conread position: | 38-276 |
Cow position: | chr5:12581313-12581064 (view UCSC Genome Browser custom track) |
Alignm length: | 254 |
Alignm identity: | 177 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 22, 37 |
Conread position: | 40-191 |
Cow position: | chr5:33516154-33516316 (view UCSC Genome Browser custom track) |
Alignm length: | 164 |
Alignm identity: | 126 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 19, 143 |
Conread position: | 40-313 |
Cow position: | chr5:28370796-28371078 (view UCSC Genome Browser custom track) |
Alignm length: | 284 |
Alignm identity: | 194 |
Alignm E-value: | 1e-31 |
Alignm gaps (pig, cow): | 17, 44 |
Conread position: | 40-412 |
Cow position: | chr5:6149430-6149800 (view UCSC Genome Browser custom track) |
Alignm length: | 381 |
Alignm identity: | 255 |
Alignm E-value: | 3e-38 |
Alignm gaps (pig, cow): | 19, 43 |
Conread position: | 40-602 |
Cow position: | chr5:37048661-37048095 (view UCSC Genome Browser custom track) |
Alignm length: | 586 |
Alignm identity: | 399 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 15, 85 |
Conread position: | 41-193 |
Cow position: | chr5:37624693-37624531 (view UCSC Genome Browser custom track) |
Alignm length: | 164 |
Alignm identity: | 125 |
Alignm E-value: | 5e-22 |
Alignm gaps (pig, cow): | 20, 142 |
Conread position: | 41-198 |
Cow position: | chr5:12602510-12602344 (view UCSC Genome Browser custom track) |
Alignm length: | 168 |
Alignm identity: | 125 |
Alignm E-value: | 5e-22 |
Alignm gaps (pig, cow): | 18, 148 |
Conread position: | 42-596 |
Cow position: | chr5:26098072-26098636 (view UCSC Genome Browser custom track) |
Alignm length: | 581 |
Alignm identity: | 367 |
Alignm E-value: | 5e-34 |
Alignm gaps (pig, cow): | 17, 35 |
Conread position: | 42-600 |
Cow position: | chr5:23235077-23234513 (view UCSC Genome Browser custom track) |
Alignm length: | 587 |
Alignm identity: | 395 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 17, 63 |
Conread position: | 42-603 |
Cow position: | chr5:29431053-29431594 (view UCSC Genome Browser custom track) |
Alignm length: | 581 |
Alignm identity: | 378 |
Alignm E-value: | 1e-32 |
Alignm gaps (pig, cow): | 17, 49 |
Conread position: | 43-487 |
Cow position: | chr5:10455953-10455515 (view UCSC Genome Browser custom track) |
Alignm length: | 461 |
Alignm identity: | 326 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 13, 103 |
Conread position: | 43-604 |
Cow position: | chr5:1304612-1305192 (view UCSC Genome Browser custom track) |
Alignm length: | 599 |
Alignm identity: | 397 |
Alignm E-value: | 5.04467e-44 |
Alignm gaps (pig, cow): | 16, 110 |
Conread position: | 54-463 |
Cow position: | chr5:28770856-28770435 (view UCSC Genome Browser custom track) |
Alignm length: | 435 |
Alignm identity: | 294 |
Alignm E-value: | 3e-37 |
Alignm gaps (pig, cow): | 70, 125 |
Conread position: | 58-352 |
Cow position: | chr5:35749134-35748823 (view UCSC Genome Browser custom track) |
Alignm length: | 316 |
Alignm identity: | 212 |
Alignm E-value: | 5e-23 |
Alignm gaps (pig, cow): | 66, 271 |
Conread position: | 60-313 |
Cow position: | chr5:58842697-58842426 (view UCSC Genome Browser custom track) |
Alignm length: | 272 |
Alignm identity: | 186 |
Alignm E-value: | 7e-26 |
Alignm gaps (pig, cow): | 62, 0 |
Conread position: | 65-413 |
Cow position: | chr5:63621138-63620781 (view UCSC Genome Browser custom track) |
Alignm length: | 375 |
Alignm identity: | 264 |
Alignm E-value: | 6e-35 |
Alignm gaps (pig, cow): | 51, 115 |
Conread position: | 78-412 |
Cow position: | chr5:57964739-57965069 (view UCSC Genome Browser custom track) |
Alignm length: | 346 |
Alignm identity: | 234 |
Alignm E-value: | 3e-29 |
Alignm gaps (pig, cow): | 47, 77 |
Conread position: | 83-432 |
Cow position: | chr5:25925325-25925668 (view UCSC Genome Browser custom track) |
Alignm length: | 353 |
Alignm identity: | 239 |
Alignm E-value: | 1e-39 |
Alignm gaps (pig, cow): | 57, 52 |
Conread position: | 87-473 |
Cow position: | chr5:13575182-13575600 (view UCSC Genome Browser custom track) |
Alignm length: | 425 |
Alignm identity: | 293 |
Alignm E-value: | 9e-39 |
Alignm gaps (pig, cow): | 32, 176 |
Conread position: | 91-604 |
Cow position: | chr5:45911740-45912256 (view UCSC Genome Browser custom track) |
Alignm length: | 536 |
Alignm identity: | 366 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 34, 175 |
Conread position: | 100-573 |
Cow position: | chr5:57128002-57127517 (view UCSC Genome Browser custom track) |
Alignm length: | 498 |
Alignm identity: | 349 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 55, 15 |
Conread position: | 199-567 |
Cow position: | chr5:76122490-76122842 (view UCSC Genome Browser custom track) |
Alignm length: | 371 |
Alignm identity: | 243 |
Alignm E-value: | 4e-30 |
Alignm gaps (pig, cow): | 297, 115 |
Conread position: | 201-409 |
Cow position: | chr5:53599626-53599825 (view UCSC Genome Browser custom track) |
Alignm length: | 211 |
Alignm identity: | 166 |
Alignm E-value: | 9e-39 |
Alignm gaps (pig, cow): | 128, 39 |
Conread position: | 201-425 |
Cow position: | chr5:56109730-56109943 (view UCSC Genome Browser custom track) |
Alignm length: | 227 |
Alignm identity: | 164 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 126, 96 |
Conread position: | 201-604 |
Cow position: | chr5:21145801-21146188 (view UCSC Genome Browser custom track) |
Alignm length: | 405 |
Alignm identity: | 300 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 128, 20 |
Conread position: | 201-604 |
Cow position: | chr5:60968862-60968450 (view UCSC Genome Browser custom track) |
Alignm length: | 418 |
Alignm identity: | 306 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 126, 28 |
Conread position: | 202-410 |
Cow position: | chr5:51953302-51953099 (view UCSC Genome Browser custom track) |
Alignm length: | 212 |
Alignm identity: | 157 |
Alignm E-value: | 4e-31 |
Alignm gaps (pig, cow): | 127, 108 |
Conread position: | 202-464 |
Cow position: | chr5:62580232-62579979 (view UCSC Genome Browser custom track) |
Alignm length: | 271 |
Alignm identity: | 191 |
Alignm E-value: | 8e-27 |
Alignm gaps (pig, cow): | 127, 56 |
Conread position: | 204-423 |
Cow position: | chr5:38274201-38273985 (view UCSC Genome Browser custom track) |
Alignm length: | 223 |
Alignm identity: | 159 |
Alignm E-value: | 1e-28 |
Alignm gaps (pig, cow): | 32, 15 |
Conread position: | 216-558 |
Cow position: | chr5:9232959-9233295 (view UCSC Genome Browser custom track) |
Alignm length: | 354 |
Alignm identity: | 243 |
Alignm E-value: | 5e-33 |
Alignm gaps (pig, cow): | 65, 50 |
Conread position: | 219-414 |
Cow position: | chr5:38911483-38911292 (view UCSC Genome Browser custom track) |
Alignm length: | 197 |
Alignm identity: | 139 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 110, 75 |
Conread position: | 223-604 |
Cow position: | chr5:15882046-15882423 (view UCSC Genome Browser custom track) |
Alignm length: | 387 |
Alignm identity: | 270 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 106, 75 |
Conread position: | 238-604 |
Cow position: | chr5:51076233-51076602 (view UCSC Genome Browser custom track) |
Alignm length: | 377 |
Alignm identity: | 272 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 92, 72 |
Conread position: | 260-414 |
Cow position: | chr5:73051500-73051345 (view UCSC Genome Browser custom track) |
Alignm length: | 157 |
Alignm identity: | 114 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 71, 98 |
Conread position: | 270-489 |
Cow position: | chr5:50156215-50156434 (view UCSC Genome Browser custom track) |
Alignm length: | 226 |
Alignm identity: | 160 |
Alignm E-value: | 7e-26 |
Alignm gaps (pig, cow): | 5, 47 |
Conread position: | 271-584 |
Cow position: | chr5:27493072-27492757 (view UCSC Genome Browser custom track) |
Alignm length: | 323 |
Alignm identity: | 227 |
Alignm E-value: | 4.00001e-41 |
Alignm gaps (pig, cow): | 87, 15 |
Conread position: | 271-602 |
Cow position: | chr5:54157065-54156744 (view UCSC Genome Browser custom track) |
Alignm length: | 336 |
Alignm identity: | 232 |
Alignm E-value: | 3e-38 |
Alignm gaps (pig, cow): | 24, 35 |
Conread position: | 283-532 |
Cow position: | chr5:21166699-21166946 (view UCSC Genome Browser custom track) |
Alignm length: | 254 |
Alignm identity: | 186 |
Alignm E-value: | 3e-39 |
Alignm gaps (pig, cow): | 46, 30 |
Conread position: | 314-604 |
Cow position: | chr5:10785894-10786195 (view UCSC Genome Browser custom track) |
Alignm length: | 306 |
Alignm identity: | 217 |
Alignm E-value: | 8e-37 |
Alignm gaps (pig, cow): | 15, 40 |
Conread position: | 315-550 |
Cow position: | chr5:31550947-31550711 (view UCSC Genome Browser custom track) |
Alignm length: | 244 |
Alignm identity: | 168 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 15, 45 |
Conread position: | 356-503 |
Cow position: | chr5:60725328-60725177 (view UCSC Genome Browser custom track) |
Alignm length: | 152 |
Alignm identity: | 115 |
Alignm E-value: | 6e-25 |
Alignm gaps (pig, cow): | 38, 0 |
Conread position: | 358-498 |
Cow position: | chr5:34168451-34168310 (view UCSC Genome Browser custom track) |
Alignm length: | 143 |
Alignm identity: | 108 |
Alignm E-value: | 5e-23 |
Alignm gaps (pig, cow): | 78, 50 |
Conread position: | 369-604 |
Cow position: | chr5:34483251-34483491 (view UCSC Genome Browser custom track) |
Alignm length: | 244 |
Alignm identity: | 184 |
Alignm E-value: | 3.99931e-42 |
Alignm gaps (pig, cow): | 41, 106 |
Conread position: | 383-604 |
Cow position: | chr5:25927438-25927654 (view UCSC Genome Browser custom track) |
Alignm length: | 225 |
Alignm identity: | 173 |
Alignm E-value: | 3e-40 |
Alignm gaps (pig, cow): | 57, 11 |
Conread position: | 400-596 |
Cow position: | chr5:23752972-23753168 (view UCSC Genome Browser custom track) |
Alignm length: | 201 |
Alignm identity: | 139 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 9, 146 |
Conread position: | 411-604 |
Cow position: | chr5:70128374-70128183 (view UCSC Genome Browser custom track) |
Alignm length: | 197 |
Alignm identity: | 139 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 27, 52 |
Conread position: | 416-604 |
Cow position: | chr5:364362-364551 (view UCSC Genome Browser custom track) |
Alignm length: | 193 |
Alignm identity: | 135 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 25, 82 |
Conread position: | 418-602 |
Cow position: | chr5:48224352-48224538 (view UCSC Genome Browser custom track) |
Alignm length: | 187 |
Alignm identity: | 134 |
Alignm E-value: | 9e-28 |
Alignm gaps (pig, cow): | 18, 0 |
Show alignments to all cow chromosomes.