Cow genome map


           Conread name:
           Lym2-sn24_C10.f
        

               Conread position:
               10-354
               

               Cow position:
               
               

               Alignm length:
               377
               

               Alignm identity:
               266
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               16, 304
               

               Conread position:
               25-198
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               34, 13
               

               Conread position:
               35-197
               

               Cow position:
               
               

               Alignm length:
               171
               

               Alignm identity:
               127
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               23, 87
               

               Conread position:
               38-276
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               22, 37
               

               Conread position:
               40-191
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               19, 143
               

               Conread position:
               40-313
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               194
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               17, 44
               

               Conread position:
               40-412
               

               Cow position:
               
               

               Alignm length:
               381
               

               Alignm identity:
               255
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               19, 43
               

               Conread position:
               40-602
               

               Cow position:
               
               

               Alignm length:
               586
               

               Alignm identity:
               399
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 85
               

               Conread position:
               41-193
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               125
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               20, 142
               

               Conread position:
               41-198
               

               Cow position:
               
               

               Alignm length:
               168
               

               Alignm identity:
               125
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               18, 148
               

               Conread position:
               42-596
               

               Cow position:
               
               

               Alignm length:
               581
               

               Alignm identity:
               367
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               17, 35
               

               Conread position:
               42-600
               

               Cow position:
               
               

               Alignm length:
               587
               

               Alignm identity:
               395
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 63
               

               Conread position:
               42-603
               

               Cow position:
               
               

               Alignm length:
               581
               

               Alignm identity:
               378
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               17, 49
               

               Conread position:
               43-487
               

               Cow position:
               
               

               Alignm length:
               461
               

               Alignm identity:
               326
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 103
               

               Conread position:
               43-604
               

               Cow position:
               
               

               Alignm length:
               599
               

               Alignm identity:
               397
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               16, 110
               

               Conread position:
               54-463
               

               Cow position:
               
               

               Alignm length:
               435
               

               Alignm identity:
               294
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               70, 125
               

               Conread position:
               58-352
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               212
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               66, 271
               

               Conread position:
               60-313
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               186
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               65-413
               

               Cow position:
               
               

               Alignm length:
               375
               

               Alignm identity:
               264
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               51, 115
               

               Conread position:
               78-412
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               234
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               47, 77
               

               Conread position:
               83-432
               

               Cow position:
               
               

               Alignm length:
               353
               

               Alignm identity:
               239
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               57, 52
               

               Conread position:
               87-473
               

               Cow position:
               
               

               Alignm length:
               425
               

               Alignm identity:
               293
               

               Alignm E-value:
               9e-39
               

               Alignm gaps (pig, cow):
               32, 176
               

               Conread position:
               91-604
               

               Cow position:
               
               

               Alignm length:
               536
               

               Alignm identity:
               366
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 175
               

               Conread position:
               100-573
               

               Cow position:
               
               

               Alignm length:
               498
               

               Alignm identity:
               349
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 15
               

               Conread position:
               199-567
               

               Cow position:
               
               

               Alignm length:
               371
               

               Alignm identity:
               243
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               297, 115
               

               Conread position:
               201-409
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               166
               

               Alignm E-value:
               9e-39
               

               Alignm gaps (pig, cow):
               128, 39
               

               Conread position:
               201-425
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               126, 96
               

               Conread position:
               201-604
               

               Cow position:
               
               

               Alignm length:
               405
               

               Alignm identity:
               300
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               128, 20
               

               Conread position:
               201-604
               

               Cow position:
               
               

               Alignm length:
               418
               

               Alignm identity:
               306
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               126, 28
               

               Conread position:
               202-410
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               157
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               127, 108
               

               Conread position:
               202-464
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               191
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               127, 56
               

               Conread position:
               204-423
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               32, 15
               

               Conread position:
               216-558
               

               Cow position:
               
               

               Alignm length:
               354
               

               Alignm identity:
               243
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               65, 50
               

               Conread position:
               219-414
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               110, 75
               

               Conread position:
               223-604
               

               Cow position:
               
               

               Alignm length:
               387
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               106, 75
               

               Conread position:
               238-604
               

               Cow position:
               
               

               Alignm length:
               377
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               92, 72
               

               Conread position:
               260-414
               

               Cow position:
               
               

               Alignm length:
               157
               

               Alignm identity:
               114
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               71, 98
               

               Conread position:
               270-489
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               160
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               5, 47
               

               Conread position:
               271-584
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               227
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               87, 15
               

               Conread position:
               271-602
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               232
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               24, 35
               

               Conread position:
               283-532
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               186
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               46, 30
               

               Conread position:
               314-604
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               217
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               15, 40
               

               Conread position:
               315-550
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               15, 45
               

               Conread position:
               356-503
               

               Cow position:
               
               

               Alignm length:
               152
               

               Alignm identity:
               115
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               358-498
               

               Cow position:
               
               

               Alignm length:
               143
               

               Alignm identity:
               108
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               78, 50
               

               Conread position:
               369-604
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               184
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               41, 106
               

               Conread position:
               383-604
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               173
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               57, 11
               

               Conread position:
               400-596
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               9, 146
               

               Conread position:
               411-604
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               27, 52
               

               Conread position:
               416-604
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               25, 82
               

               Conread position:
               418-602
               

               Cow position:
               
               

               Alignm length:
               187
               

               Alignm identity:
               134
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               18, 0
               
Show alignments to all cow chromosomes.