Cow genome map
| Conread name: | Lym2-sn24_C10.f |
| Conread position: | 37-595 |
| Cow position: | chr6:6635780-6635208 (view UCSC Genome Browser custom track) |
| Alignm length: | 587 |
| Alignm identity: | 404 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 143 |
| Conread position: | 38-185 |
| Cow position: | chr6:3935991-3936146 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 117 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 81, 145 |
| Conread position: | 38-198 |
| Cow position: | chr6:14280297-14280125 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 22, 146 |
| Conread position: | 38-198 |
| Cow position: | chr6:53416318-53416488 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 17, 146 |
| Conread position: | 38-604 |
| Cow position: | chr6:31687555-31688130 (view UCSC Genome Browser custom track) |
| Alignm length: | 597 |
| Alignm identity: | 410 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 144 |
| Conread position: | 38-604 |
| Cow position: | chr6:45692031-45692603 (view UCSC Genome Browser custom track) |
| Alignm length: | 591 |
| Alignm identity: | 400 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 57 |
| Conread position: | 39-417 |
| Cow position: | chr6:29300178-29299793 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 270 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 21, 44 |
| Conread position: | 40-185 |
| Cow position: | chr6:6244109-6244262 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 119 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 19, 141 |
| Conread position: | 40-192 |
| Cow position: | chr6:6722778-6722624 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 115, 48 |
| Conread position: | 40-200 |
| Cow position: | chr6:50502226-50502061 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 126 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 21, 47 |
| Conread position: | 40-290 |
| Cow position: | chr6:54296246-54295985 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 183 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 19, 32 |
| Conread position: | 40-423 |
| Cow position: | chr6:1939853-1940233 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 269 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 19, 84 |
| Conread position: | 40-486 |
| Cow position: | chr6:5678403-5678871 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 317 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 19, 140 |
| Conread position: | 41-604 |
| Cow position: | chr6:45616802-45617377 (view UCSC Genome Browser custom track) |
| Alignm length: | 589 |
| Alignm identity: | 418 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 62 |
| Conread position: | 42-259 |
| Cow position: | chr6:55398424-55398193 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 173 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 81, 12 |
| Conread position: | 42-266 |
| Cow position: | chr6:35126480-35126724 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 17, 198 |
| Conread position: | 42-342 |
| Cow position: | chr6:58593512-58593828 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 225 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 17, 140 |
| Conread position: | 45-412 |
| Cow position: | chr6:55659360-55659754 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 264 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 8, 45 |
| Conread position: | 48-409 |
| Cow position: | chr6:23648299-23648680 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 258 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 11, 29 |
| Conread position: | 58-409 |
| Cow position: | chr6:46627604-46627247 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 228 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 49, 112 |
| Conread position: | 62-580 |
| Cow position: | chr6:23932388-23932883 (view UCSC Genome Browser custom track) |
| Alignm length: | 528 |
| Alignm identity: | 348 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 57, 113 |
| Conread position: | 76-604 |
| Cow position: | chr6:39917762-39917225 (view UCSC Genome Browser custom track) |
| Alignm length: | 570 |
| Alignm identity: | 404 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 103 |
| Conread position: | 102-541 |
| Cow position: | chr6:41157794-41157348 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 178 |
| Conread position: | 195-598 |
| Cow position: | chr6:69274323-69274727 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 101 |
| Conread position: | 197-604 |
| Cow position: | chr6:6244468-6244850 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 201-410 |
| Cow position: | chr6:32428889-32428688 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 126, 72 |
| Conread position: | 201-601 |
| Cow position: | chr6:44377713-44377329 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 128, 12 |
| Conread position: | 201-604 |
| Cow position: | chr6:29078174-29077791 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 288 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 128, 20 |
| Conread position: | 201-604 |
| Cow position: | chr6:41557929-41557525 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 129, 117 |
| Conread position: | 202-410 |
| Cow position: | chr6:66840313-66840109 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 116, 0 |
| Conread position: | 203-603 |
| Cow position: | chr6:11159552-11159946 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 278 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 45, 60 |
| Conread position: | 203-604 |
| Cow position: | chr6:62754046-62754433 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 238, 86 |
| Conread position: | 204-483 |
| Cow position: | chr6:3373980-3374271 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 216 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 125, 106 |
| Conread position: | 223-604 |
| Cow position: | chr6:23891976-23891613 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 106, 68 |
| Conread position: | 258-604 |
| Cow position: | chr6:4666397-4666740 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 57 |
| Conread position: | 354-604 |
| Cow position: | chr6:12519799-12519554 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 181 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 6, 48 |
| Conread position: | 399-601 |
| Cow position: | chr6:27710905-27710707 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 149 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 42, 95 |
| Conread position: | 400-603 |
| Cow position: | chr6:51071969-51071765 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 41, 13 |
Show alignments to all cow chromosomes.