Cow genome map
| Conread name: | Lym2-sn24_C10.f |
| Conread position: | 40-266 |
| Cow position: | chr7:40622813-40622566 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 19, 85 |
| Conread position: | 40-284 |
| Cow position: | chr7:40023321-40023074 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 180 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 19, 47 |
| Conread position: | 40-604 |
| Cow position: | chr7:29377518-29378088 (view UCSC Genome Browser custom track) |
| Alignm length: | 589 |
| Alignm identity: | 410 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 113 |
| Conread position: | 41-198 |
| Cow position: | chr7:43257829-43257662 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 130 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 18, 143 |
| Conread position: | 41-604 |
| Cow position: | chr7:11592596-11593147 (view UCSC Genome Browser custom track) |
| Alignm length: | 585 |
| Alignm identity: | 380 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 18, 49 |
| Conread position: | 42-194 |
| Cow position: | chr7:46216683-46216520 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 42-197 |
| Cow position: | chr7:61426209-61426046 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 17, 141 |
| Conread position: | 42-510 |
| Cow position: | chr7:62049045-62048544 (view UCSC Genome Browser custom track) |
| Alignm length: | 515 |
| Alignm identity: | 365 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 142 |
| Conread position: | 42-535 |
| Cow position: | chr7:67499328-67498821 (view UCSC Genome Browser custom track) |
| Alignm length: | 523 |
| Alignm identity: | 349 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 17, 276 |
| Conread position: | 43-341 |
| Cow position: | chr7:51616311-51616023 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 199 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 81, 40 |
| Conread position: | 45-435 |
| Cow position: | chr7:45099861-45099452 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 287 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 79, 213 |
| Conread position: | 54-604 |
| Cow position: | chr7:48334883-48335414 (view UCSC Genome Browser custom track) |
| Alignm length: | 569 |
| Alignm identity: | 377 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 70, 29 |
| Conread position: | 58-411 |
| Cow position: | chr7:5247322-5247692 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 252 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 63, 98 |
| Conread position: | 58-412 |
| Cow position: | chr7:49893082-49893432 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 235 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 56, 14 |
| Conread position: | 59-408 |
| Cow position: | chr7:59845068-59844705 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 254 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 60, 196 |
| Conread position: | 72-347 |
| Cow position: | chr7:19465260-19465533 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 190 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 47, 107 |
| Conread position: | 78-602 |
| Cow position: | chr7:42221826-42222377 (view UCSC Genome Browser custom track) |
| Alignm length: | 563 |
| Alignm identity: | 400 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 69 |
| Conread position: | 89-604 |
| Cow position: | chr7:39512028-39512533 (view UCSC Genome Browser custom track) |
| Alignm length: | 531 |
| Alignm identity: | 359 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 35 |
| Conread position: | 103-603 |
| Cow position: | chr7:63328664-63328133 (view UCSC Genome Browser custom track) |
| Alignm length: | 540 |
| Alignm identity: | 371 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 74 |
| Conread position: | 189-407 |
| Cow position: | chr7:59164360-59164149 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 13, 110 |
| Conread position: | 200-488 |
| Cow position: | chr7:5701368-5701089 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 129, 15 |
| Conread position: | 200-604 |
| Cow position: | chr7:13823242-13822841 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 111 |
| Conread position: | 201-339 |
| Cow position: | chr7:31441904-31442038 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 108 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 127, 22 |
| Conread position: | 201-602 |
| Cow position: | chr7:20104564-20104961 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 128, 109 |
| Conread position: | 201-604 |
| Cow position: | chr7:27709198-27709606 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 280 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 128, 109 |
| Conread position: | 202-604 |
| Cow position: | chr7:61426020-61425608 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 110, 174 |
| Conread position: | 205-475 |
| Cow position: | chr7:45063973-45064238 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 200 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 124, 36 |
| Conread position: | 208-603 |
| Cow position: | chr7:65952961-65953342 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 272 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 123, 101 |
| Conread position: | 214-603 |
| Cow position: | chr7:62516443-62516068 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 59 |
| Conread position: | 267-604 |
| Cow position: | chr7:1397898-1398226 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 239 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 10, 15 |
| Conread position: | 311-497 |
| Cow position: | chr7:34798596-34798414 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 144 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 19, 41 |
| Conread position: | 314-549 |
| Cow position: | chr7:2967482-2967242 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 175 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 15, 197 |
| Conread position: | 357-603 |
| Cow position: | chr7:43004686-43004434 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 176 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 82, 42 |
| Conread position: | 381-597 |
| Cow position: | chr7:25036546-25036330 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 145 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 55, 137 |
| Conread position: | 397-604 |
| Cow position: | chr7:11187484-11187276 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 153 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 39, 104 |
| Conread position: | 399-603 |
| Cow position: | chr7:63547759-63547962 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 400-604 |
| Cow position: | chr7:28671759-28671963 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 141 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 12, 96 |
| Conread position: | 400-604 |
| Cow position: | chr7:37025092-37024886 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 145 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 400-604 |
| Cow position: | chr7:52130772-52130567 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 17, 153 |
| Conread position: | 402-604 |
| Cow position: | chr7:35754719-35754519 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 140 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 35, 10 |
| Conread position: | 408-604 |
| Cow position: | chr7:61754842-61754650 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 33, 90 |
| Conread position: | 423-604 |
| Cow position: | chr7:35171332-35171523 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 13, 0 |
Show alignments to all cow chromosomes.