Cow genome map
| Conread name: | Lym2-sn24_C10.f |
| Conread position: | 29-266 |
| Cow position: | chr8:10167441-10167189 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 30, 9 |
| Conread position: | 36-275 |
| Cow position: | chr8:31888239-31887985 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 182 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 23, 193 |
| Conread position: | 38-570 |
| Cow position: | chr8:7103807-7104359 (view UCSC Genome Browser custom track) |
| Alignm length: | 565 |
| Alignm identity: | 382 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 164 |
| Conread position: | 39-196 |
| Cow position: | chr8:14702956-14703119 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 20, 133 |
| Conread position: | 39-200 |
| Cow position: | chr8:6763677-6763846 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 132 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 19, 39 |
| Conread position: | 40-247 |
| Cow position: | chr8:28048943-28049159 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 155 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 20, 137 |
| Conread position: | 40-342 |
| Cow position: | chr8:6507671-6508001 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 228 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 16, 141 |
| Conread position: | 40-488 |
| Cow position: | chr8:40273039-40273503 (view UCSC Genome Browser custom track) |
| Alignm length: | 479 |
| Alignm identity: | 323 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 79, 35 |
| Conread position: | 40-603 |
| Cow position: | chr8:45685869-45686406 (view UCSC Genome Browser custom track) |
| Alignm length: | 585 |
| Alignm identity: | 408 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 90 |
| Conread position: | 40-604 |
| Cow position: | chr8:19773076-19772522 (view UCSC Genome Browser custom track) |
| Alignm length: | 590 |
| Alignm identity: | 407 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 145 |
| Conread position: | 40-604 |
| Cow position: | chr8:40432262-40432841 (view UCSC Genome Browser custom track) |
| Alignm length: | 602 |
| Alignm identity: | 436 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 110 |
| Conread position: | 41-193 |
| Cow position: | chr8:8480043-8480206 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 18, 143 |
| Conread position: | 41-349 |
| Cow position: | chr8:18801837-18801509 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 240 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 18, 292 |
| Conread position: | 41-403 |
| Cow position: | chr8:51442977-51443334 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 251 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 11, 152 |
| Conread position: | 41-412 |
| Cow position: | chr8:16648117-16648492 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 254 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 14, 142 |
| Conread position: | 41-604 |
| Cow position: | chr8:32720514-32720000 (view UCSC Genome Browser custom track) |
| Alignm length: | 569 |
| Alignm identity: | 385 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 18, 50 |
| Conread position: | 42-193 |
| Cow position: | chr8:54159344-54159183 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 131 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 16, 141 |
| Conread position: | 42-414 |
| Cow position: | chr8:33818638-33819023 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 265 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 83, 280 |
| Conread position: | 43-488 |
| Cow position: | chr8:18725810-18725350 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 144 |
| Conread position: | 58-411 |
| Cow position: | chr8:21945998-21945639 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 240 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 56, 99 |
| Conread position: | 67-513 |
| Cow position: | chr8:5874724-5874267 (view UCSC Genome Browser custom track) |
| Alignm length: | 479 |
| Alignm identity: | 334 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 28, 86 |
| Conread position: | 67-604 |
| Cow position: | chr8:48681914-48682470 (view UCSC Genome Browser custom track) |
| Alignm length: | 576 |
| Alignm identity: | 399 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 120 |
| Conread position: | 79-604 |
| Cow position: | chr8:23440547-23441108 (view UCSC Genome Browser custom track) |
| Alignm length: | 571 |
| Alignm identity: | 400 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 221 |
| Conread position: | 82-603 |
| Cow position: | chr8:19368954-19369461 (view UCSC Genome Browser custom track) |
| Alignm length: | 541 |
| Alignm identity: | 368 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 197 |
| Conread position: | 97-406 |
| Cow position: | chr8:42151461-42151774 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 219 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 26, 210 |
| Conread position: | 185-394 |
| Cow position: | chr8:18810857-18810656 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 156 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 17, 5 |
| Conread position: | 189-604 |
| Cow position: | chr8:2975094-2974676 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 12 |
| Conread position: | 190-604 |
| Cow position: | chr8:33438214-33437817 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 11 |
| Conread position: | 195-412 |
| Cow position: | chr8:20672022-20672227 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 7, 96 |
| Conread position: | 195-601 |
| Cow position: | chr8:30021503-30021889 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 56 |
| Conread position: | 195-604 |
| Cow position: | chr8:4336636-4337046 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 116 |
| Conread position: | 200-410 |
| Cow position: | chr8:51633782-51633991 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 153 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 87, 121 |
| Conread position: | 201-427 |
| Cow position: | chr8:54828655-54828437 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 169 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 128, 12 |
| Conread position: | 201-487 |
| Cow position: | chr8:952444-952172 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 207 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 229, 103 |
| Conread position: | 201-604 |
| Cow position: | chr8:22102776-22103172 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 287 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 128, 107 |
| Conread position: | 202-604 |
| Cow position: | chr8:54159151-54158757 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 17 |
| Conread position: | 219-358 |
| Cow position: | chr8:31185409-31185273 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 107 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 110, 91 |
| Conread position: | 221-604 |
| Cow position: | chr8:21078932-21078565 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 47 |
| Conread position: | 224-433 |
| Cow position: | chr8:36687066-36686860 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 146 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 178, 86 |
| Conread position: | 241-419 |
| Cow position: | chr8:51562407-51562234 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 134 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 88, 36 |
| Conread position: | 247-489 |
| Cow position: | chr8:20341339-20341572 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 173 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 82, 44 |
| Conread position: | 251-604 |
| Cow position: | chr8:11792582-11792221 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 251 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 79, 16 |
| Conread position: | 254-412 |
| Cow position: | chr8:9986095-9985943 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 129 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 75, 62 |
| Conread position: | 316-602 |
| Cow position: | chr8:27369396-27369114 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 204 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 14, 43 |
| Conread position: | 320-602 |
| Cow position: | chr8:21118958-21119246 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 212 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 241 |
| Conread position: | 365-603 |
| Cow position: | chr8:8480680-8480914 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 178 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 67, 5 |
| Conread position: | 384-592 |
| Cow position: | chr8:59137656-59137864 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 143 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 52, 15 |
| Conread position: | 400-604 |
| Cow position: | chr8:49384799-49384595 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 13, 111 |
Show alignments to all cow chromosomes.