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Cow genome map

           
Conread name:
           
Lym2-sn37_F04.f
        

               
Conread position:
               
86-234
               

               
Cow position:
               
chr10:25193105-25192959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
5, 31
               

               
Conread position:
               
102-485
               

               
Cow position:
               
chr10:43509113-43508728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
11, 33
               

               
Conread position:
               
102-485
               

               
Cow position:
               
chr10:52113560-52113936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 52
               

               
Conread position:
               
102-624
               

               
Cow position:
               
chr10:26209132-26209661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
545
               

               
Alignm identity:
               
390
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 142
               

               
Conread position:
               
109-411
               

               
Cow position:
               
chr10:51942893-51942590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
11, 7
               

               
Conread position:
               
111-529
               

               
Cow position:
               
chr10:62353563-62353151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 49
               

               
Conread position:
               
111-543
               

               
Cow position:
               
chr10:37014737-37014310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 23
               

               
Conread position:
               
112-267
               

               
Cow position:
               
chr10:60697526-60697676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
112-269
               

               
Cow position:
               
chr10:23310927-23311082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
112-296
               

               
Cow position:
               
chr10:2535672-2535487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
8, 21
               

               
Conread position:
               
112-313
               

               
Cow position:
               
chr10:23583468-23583666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
112-339
               

               
Cow position:
               
chr10:49947779-49948005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
218, 8
               

               
Conread position:
               
112-345
               

               
Cow position:
               
chr10:4151641-4151414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
8, 21
               

               
Conread position:
               
112-351
               

               
Cow position:
               
chr10:973232-973006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
162, 19
               

               
Conread position:
               
112-402
               

               
Cow position:
               
chr10:19549388-19549681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
201, 8
               

               
Conread position:
               
112-408
               

               
Cow position:
               
chr10:10120296-10120001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 151
               

               
Conread position:
               
112-428
               

               
Cow position:
               
chr10:45871617-45871299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
145, 105
               

               
Conread position:
               
112-445
               

               
Cow position:
               
chr10:45378902-45379239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
52, 47
               

               
Conread position:
               
112-447
               

               
Cow position:
               
chr10:37415892-37415552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 132
               

               
Conread position:
               
112-481
               

               
Cow position:
               
chr10:59843806-59844191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
122, 109
               

               
Conread position:
               
112-505
               

               
Cow position:
               
chr10:17844869-17844478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
164, 152
               

               
Conread position:
               
112-512
               

               
Cow position:
               
chr10:22049359-22048952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 98
               

               
Conread position:
               
112-518
               

               
Cow position:
               
chr10:51696843-51696451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 85
               

               
Conread position:
               
112-543
               

               
Cow position:
               
chr10:34430123-34430541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 22
               

               
Conread position:
               
112-553
               

               
Cow position:
               
chr10:57786441-57785996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 76
               

               
Conread position:
               
112-562
               

               
Cow position:
               
chr10:15115717-15115267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 135
               

               
Conread position:
               
112-570
               

               
Cow position:
               
chr10:56828215-56828676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
160, 139
               

               
Conread position:
               
112-586
               

               
Cow position:
               
chr10:1488933-1488473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
192, 21
               

               
Conread position:
               
112-591
               

               
Cow position:
               
chr10:33067474-33067964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 108
               

               
Conread position:
               
112-609
               

               
Cow position:
               
chr10:16598790-16598293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 23
               

               
Conread position:
               
112-610
               

               
Cow position:
               
chr10:17073262-17073756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
374
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
269, 151
               

               
Conread position:
               
112-610
               

               
Cow position:
               
chr10:24756514-24756036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
377
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
201, 149
               

               
Conread position:
               
112-610
               

               
Cow position:
               
chr10:61588158-61588657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 22
               

               
Conread position:
               
112-611
               

               
Cow position:
               
chr10:35862126-35862628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
367
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 22
               

               
Conread position:
               
112-611
               

               
Cow position:
               
chr10:50533766-50534265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 22
               

               
Conread position:
               
112-612
               

               
Cow position:
               
chr10:48462241-48462740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
371
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
201, 79
               

               
Conread position:
               
112-627
               

               
Cow position:
               
chr10:30352955-30352420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
540
               

               
Alignm identity:
               
395
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 21
               

               
Conread position:
               
112-631
               

               
Cow position:
               
chr10:19895495-19894982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
529
               

               
Alignm identity:
               
369
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
161, 46
               

               
Conread position:
               
112-640
               

               
Cow position:
               
chr10:39387553-39387035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
539
               

               
Alignm identity:
               
380
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
201, 8
               

               
Conread position:
               
113-265
               

               
Cow position:
               
chr10:17149982-17149829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
113-274
               

               
Cow position:
               
chr10:55600056-55600217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
7, 20
               

               
Conread position:
               
113-275
               

               
Cow position:
               
chr10:6242410-6242570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
7, 78
               

               
Conread position:
               
113-290
               

               
Cow position:
               
chr10:24902883-24903062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
7, 20
               

               
Conread position:
               
113-296
               

               
Cow position:
               
chr10:41676307-41676492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
7, 55
               

               
Conread position:
               
113-306
               

               
Cow position:
               
chr10:58044027-58044220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
7, 20
               

               
Conread position:
               
113-308
               

               
Cow position:
               
chr10:53405574-53405384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
7, 20
               

               
Conread position:
               
113-311
               

               
Cow position:
               
chr10:41760220-41760417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
143, 92
               

               
Conread position:
               
113-313
               

               
Cow position:
               
chr10:24447970-24447766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
65, 174
               

               
Conread position:
               
113-324
               

               
Cow position:
               
chr10:33084340-33084544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
113-328
               

               
Cow position:
               
chr10:6199120-6198908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 16
               

               
Conread position:
               
113-345
               

               
Cow position:
               
chr10:39124231-39123997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
104, 17
               

               
Conread position:
               
113-371
               

               
Cow position:
               
chr10:33116850-33117109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
199, 87
               

               
Conread position:
               
113-392
               

               
Cow position:
               
chr10:19191855-19191596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
262, 81
               

               
Conread position:
               
113-394
               

               
Cow position:
               
chr10:4109686-4109409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
110, 7
               

               
Conread position:
               
113-395
               

               
Cow position:
               
chr10:45658248-45657960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
7, 53
               

               
Conread position:
               
113-396
               

               
Cow position:
               
chr10:4184297-4184006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
7, 21
               

               
Conread position:
               
113-396
               

               
Cow position:
               
chr10:52695625-52695914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
200, 0
               

               
Conread position:
               
113-419
               

               
Cow position:
               
chr10:35778800-35779110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 20
               

               
Conread position:
               
113-440
               

               
Cow position:
               
chr10:46492894-46493229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
127, 23
               

               
Conread position:
               
113-445
               

               
Cow position:
               
chr10:24375645-24375319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
7, 20
               

               
Conread position:
               
113-459
               

               
Cow position:
               
chr10:64042184-64041838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 21
               

               
Conread position:
               
113-474
               

               
Cow position:
               
chr10:35792027-35791673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 20
               

               
Conread position:
               
113-486
               

               
Cow position:
               
chr10:35245853-35246215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 15
               

               
Conread position:
               
113-490
               

               
Cow position:
               
chr10:35802259-35802645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 78
               

               
Conread position:
               
113-495
               

               
Cow position:
               
chr10:20553288-20552906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 185
               

               
Conread position:
               
113-503
               

               
Cow position:
               
chr10:53247902-53248297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 35
               

               
Conread position:
               
113-505
               

               
Cow position:
               
chr10:52296598-52296207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 99
               

               
Conread position:
               
113-508
               

               
Cow position:
               
chr10:64285692-64286088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 171
               

               
Conread position:
               
113-512
               

               
Cow position:
               
chr10:23912412-23912795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
243, 20
               

               
Conread position:
               
113-512
               

               
Cow position:
               
chr10:47543177-47542792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
163, 104
               

               
Conread position:
               
113-523
               

               
Cow position:
               
chr10:11081066-11080650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 134
               

               
Conread position:
               
113-528
               

               
Cow position:
               
chr10:41802791-41803209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 157
               

               
Conread position:
               
113-543
               

               
Cow position:
               
chr10:24732404-24731985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
265, 20
               

               
Conread position:
               
113-548
               

               
Cow position:
               
chr10:54848877-54848442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
151, 7
               

               
Conread position:
               
113-558
               

               
Cow position:
               
chr10:34174877-34175337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
144, 19
               

               
Conread position:
               
113-608
               

               
Cow position:
               
chr10:2973988-2974467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
508
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 7
               

               
Conread position:
               
113-608
               

               
Cow position:
               
chr10:9675360-9675851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 87
               

               
Conread position:
               
113-608
               

               
Cow position:
               
chr10:34655009-34655507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
372
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 18
               

               
Conread position:
               
113-608
               

               
Cow position:
               
chr10:51944463-51943968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
378
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
164, 84
               

               
Conread position:
               
113-609
               

               
Cow position:
               
chr10:49146612-49146138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
370
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
206, 29
               

               
Conread position:
               
113-610
               

               
Cow position:
               
chr10:31027541-31028052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
394
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 183
               

               
Conread position:
               
113-610
               

               
Cow position:
               
chr10:31534838-31534355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
506
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 197
               

               
Conread position:
               
113-610
               

               
Cow position:
               
chr10:56475569-56475071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
508
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 21
               

               
Conread position:
               
113-611
               

               
Cow position:
               
chr10:5151448-5150943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
387
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 74
               

               
Conread position:
               
113-611
               

               
Cow position:
               
chr10:19372235-19372722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
200, 153
               

               
Conread position:
               
113-612
               

               
Cow position:
               
chr10:25926-25418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
522
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 21
               

               
Conread position:
               
113-612
               

               
Cow position:
               
chr10:24022182-24022682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 20
               

               
Conread position:
               
113-612
               

               
Cow position:
               
chr10:30522962-30523457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
508
               

               
Alignm identity:
               
374
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
200, 24
               

               
Conread position:
               
113-623
               

               
Cow position:
               
chr10:10720571-10721098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
531
               

               
Alignm identity:
               
391
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 25
               

               
Conread position:
               
113-623
               

               
Cow position:
               
chr10:22390696-22390183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
528
               

               
Alignm identity:
               
391
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 7
               

               
Conread position:
               
113-624
               

               
Cow position:
               
chr10:42746020-42745487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
540
               

               
Alignm identity:
               
367
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 7
               

               
Conread position:
               
113-625
               

               
Cow position:
               
chr10:59010034-59010552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
529
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 133
               

               
Conread position:
               
113-630
               

               
Cow position:
               
chr10:21082482-21081959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
545
               

               
Alignm identity:
               
367
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 21
               

               
Conread position:
               
113-630
               

               
Cow position:
               
chr10:31400798-31401319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
529
               

               
Alignm identity:
               
401
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
201, 7
               

               
Conread position:
               
113-632
               

               
Cow position:
               
chr10:62286659-62286130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
531
               

               
Alignm identity:
               
384
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 360
               

               
Conread position:
               
113-635
               

               
Cow position:
               
chr10:8093217-8093737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
529
               

               
Alignm identity:
               
400
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
168, 7
               

               
Conread position:
               
113-639
               

               
Cow position:
               
chr10:2704298-2703796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
532
               

               
Alignm identity:
               
379
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 20
               

               
Conread position:
               
113-643
               

               
Cow position:
               
chr10:32503529-32503036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
535
               

               
Alignm identity:
               
390
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 127
               

               
Conread position:
               
114-505
               

               
Cow position:
               
chr10:29919736-29920122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
6, 136
               

               
Conread position:
               
114-590
               

               
Cow position:
               
chr10:57142115-57142597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
6, 20
               

               
Conread position:
               
115-239
               

               
Cow position:
               
chr10:46941380-46941503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
115-268
               

               
Cow position:
               
chr10:37426032-37426187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
115-308
               

               
Cow position:
               
chr10:628083-627896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
115-309
               

               
Cow position:
               
chr10:23346203-23346396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
5, 66
               

               
Conread position:
               
115-312
               

               
Cow position:
               
chr10:54819365-54819170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
149, 83
               

               
Conread position:
               
115-363
               

               
Cow position:
               
chr10:61922047-61922289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
164, 14
               

               
Conread position:
               
115-506
               

               
Cow position:
               
chr10:57059182-57059572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 47
               

               
Conread position:
               
115-606
               

               
Cow position:
               
chr10:45770143-45769651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
371
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 50
               

               
Conread position:
               
115-613
               

               
Cow position:
               
chr10:2613467-2612980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
508
               

               
Alignm identity:
               
371
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 71
               

               
Conread position:
               
116-625
               

               
Cow position:
               
chr10:51861980-51862469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
198, 147
               

               
Conread position:
               
117-610
               

               
Cow position:
               
chr10:59663875-59664365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
508
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 30
               

               
Conread position:
               
118-344
               

               
Cow position:
               
chr10:9578863-9579097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
105, 15
               

               
Conread position:
               
118-369
               

               
Cow position:
               
chr10:30369727-30369967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
167, 14
               

               
Conread position:
               
118-379
               

               
Cow position:
               
chr10:6532063-6532318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
126, 16
               

               
Conread position:
               
118-447
               

               
Cow position:
               
chr10:28152283-28152616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
193, 29
               

               
Conread position:
               
118-543
               

               
Cow position:
               
chr10:10751895-10752309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 15
               

               
Conread position:
               
118-610
               

               
Cow position:
               
chr10:13311828-13311337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
369
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
159, 15
               

               
Conread position:
               
118-610
               

               
Cow position:
               
chr10:30360614-30360132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
201, 15
               

               
Conread position:
               
119-235
               

               
Cow position:
               
chr10:19679192-19679077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
117
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
119-305
               

               
Cow position:
               
chr10:23390215-23390405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
23, 163
               

               
Conread position:
               
119-306
               

               
Cow position:
               
chr10:24929834-24929650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
141, 13
               

               
Conread position:
               
119-313
               

               
Cow position:
               
chr10:15425144-15424957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
158, 14
               

               
Conread position:
               
119-344
               

               
Cow position:
               
chr10:8449599-8449367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
71, 13
               

               
Conread position:
               
119-344
               

               
Cow position:
               
chr10:13316033-13315810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
30, 14
               

               
Conread position:
               
119-353
               

               
Cow position:
               
chr10:6664128-6663886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
121, 14
               

               
Conread position:
               
119-363
               

               
Cow position:
               
chr10:6384626-6384385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
121, 127
               

               
Conread position:
               
119-370
               

               
Cow position:
               
chr10:6543821-6543565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
143, 0
               

               
Conread position:
               
119-385
               

               
Cow position:
               
chr10:4164364-4164093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
121, 14
               

               
Conread position:
               
119-405
               

               
Cow position:
               
chr10:47651394-47651108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
248, 179
               

               
Conread position:
               
119-418
               

               
Cow position:
               
chr10:16986426-16986123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
30, 14
               

               
Conread position:
               
119-436
               

               
Cow position:
               
chr10:1996575-1996887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
174, 80
               

               
Conread position:
               
119-447
               

               
Cow position:
               
chr10:28841052-28840720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 13
               

               
Conread position:
               
119-485
               

               
Cow position:
               
chr10:24132729-24133091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
194, 14
               

               
Conread position:
               
119-488
               

               
Cow position:
               
chr10:63276488-63276117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 40
               

               
Conread position:
               
119-498
               

               
Cow position:
               
chr10:49455999-49456358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 14
               

               
Conread position:
               
119-501
               

               
Cow position:
               
chr10:51289345-51288968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
236, 76
               

               
Conread position:
               
119-502
               

               
Cow position:
               
chr10:15871778-15872150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 14
               

               
Conread position:
               
119-512
               

               
Cow position:
               
chr10:15293360-15292973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 40
               

               
Conread position:
               
119-592
               

               
Cow position:
               
chr10:6252396-6252863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 189
               

               
Conread position:
               
119-612
               

               
Cow position:
               
chr10:6986560-6986057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 24
               

               
Conread position:
               
119-618
               

               
Cow position:
               
chr10:11966754-11967251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
369
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 13
               

               
Conread position:
               
119-625
               

               
Cow position:
               
chr10:18042274-18041768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
226, 13
               

               
Conread position:
               
119-629
               

               
Cow position:
               
chr10:17176127-17175614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
524
               

               
Alignm identity:
               
373
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 14
               

               
Conread position:
               
119-630
               

               
Cow position:
               
chr10:20132434-20132945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
523
               

               
Alignm identity:
               
371
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
194, 14
               

               
Conread position:
               
119-636
               

               
Cow position:
               
chr10:28670722-28671249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
534
               

               
Alignm identity:
               
374
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 133
               

               
Conread position:
               
120-236
               

               
Cow position:
               
chr10:10829135-10829021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
117
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
120-306
               

               
Cow position:
               
chr10:52827504-52827679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
119, 62
               

               
Conread position:
               
120-473
               

               
Cow position:
               
chr10:40163840-40164190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
199, 13
               

               
Conread position:
               
120-481
               

               
Cow position:
               
chr10:59151770-59152130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
193, 144
               

               
Conread position:
               
120-505
               

               
Cow position:
               
chr10:13765070-13765454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
194, 154
               

               
Conread position:
               
120-505
               

               
Cow position:
               
chr10:37235451-37235842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 136
               

               
Conread position:
               
120-580
               

               
Cow position:
               
chr10:6489966-6489502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 128
               

               
Conread position:
               
120-623
               

               
Cow position:
               
chr10:28104985-28105466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
159, 266
               

               
Conread position:
               
121-272
               

               
Cow position:
               
chr10:5739185-5739334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
111, 0
               

               
Conread position:
               
121-345
               

               
Cow position:
               
chr10:45624063-45624282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
102, 76
               

               
Conread position:
               
121-365
               

               
Cow position:
               
chr10:48087980-48087735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
97, 20
               

               
Conread position:
               
121-427
               

               
Cow position:
               
chr10:17022473-17022770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
192, 77
               

               
Conread position:
               
121-471
               

               
Cow position:
               
chr10:22341669-22341308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 12
               

               
Conread position:
               
121-506
               

               
Cow position:
               
chr10:29166366-29165987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
185, 73
               

               
Conread position:
               
121-523
               

               
Cow position:
               
chr10:1423925-1423523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 39
               

               
Conread position:
               
121-560
               

               
Cow position:
               
chr10:11213205-11212749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 131
               

               
Conread position:
               
121-610
               

               
Cow position:
               
chr10:26577643-26577153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 38
               

               
Conread position:
               
121-612
               

               
Cow position:
               
chr10:30224775-30224283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 25
               

               
Conread position:
               
121-623
               

               
Cow position:
               
chr10:46195876-46195385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
396
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 79
               

               
Conread position:
               
122-246
               

               
Cow position:
               
chr10:37508057-37508179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
122-257
               

               
Cow position:
               
chr10:2857139-2857006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
118, 57
               

               
Conread position:
               
122-261
               

               
Cow position:
               
chr10:49634159-49634020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
122-267
               

               
Cow position:
               
chr10:38995322-38995176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
122-316
               

               
Cow position:
               
chr10:37768395-37768202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
150, 21
               

               
Conread position:
               
122-320
               

               
Cow position:
               
chr10:48407229-48407030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
191, 21
               

               
Conread position:
               
122-340
               

               
Cow position:
               
chr10:32973113-32973333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
118, 76
               

               
Conread position:
               
122-363
               

               
Cow position:
               
chr10:22633533-22633775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
184, 141
               

               
Conread position:
               
122-375
               

               
Cow position:
               
chr10:55621762-55622008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
122-383
               

               
Cow position:
               
chr10:38376567-38376822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
180, 19
               

               
Conread position:
               
122-396
               

               
Cow position:
               
chr10:67288383-67288115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
149, 71
               

               
Conread position:
               
122-437
               

               
Cow position:
               
chr10:7817200-7816885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
190, 276
               

               
Conread position:
               
122-469
               

               
Cow position:
               
chr10:29252256-29251907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
193, 68
               

               
Conread position:
               
122-474
               

               
Cow position:
               
chr10:24312797-24313149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
22, 27
               

               
Conread position:
               
122-495
               

               
Cow position:
               
chr10:14947346-14946986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
182, 21
               

               
Conread position:
               
122-496
               

               
Cow position:
               
chr10:45371148-45370776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
191, 82
               

               
Conread position:
               
122-508
               

               
Cow position:
               
chr10:39228240-39227863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
188, 263
               

               
Conread position:
               
122-566
               

               
Cow position:
               
chr10:28776443-28776015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
190, 121
               

               
Conread position:
               
122-574
               

               
Cow position:
               
chr10:21422069-21422516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
156, 32
               

               
Conread position:
               
122-610
               

               
Cow position:
               
chr10:1978579-1979071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
507
               

               
Alignm identity:
               
377
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
190, 137
               

               
Conread position:
               
122-610
               

               
Cow position:
               
chr10:10148741-10148232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
378
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
191, 133
               

               
Conread position:
               
122-610
               

               
Cow position:
               
chr10:16645097-16645592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
501
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
155, 46
               

               
Conread position:
               
122-610
               

               
Cow position:
               
chr10:34661233-34661717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
501
               

               
Alignm identity:
               
378
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
186, 61
               

               
Conread position:
               
122-621
               

               
Cow position:
               
chr10:52278817-52278312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
389
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 113
               

               
Conread position:
               
122-629
               

               
Cow position:
               
chr10:48741067-48741579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
520
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
197, 123
               

               
Conread position:
               
123-235
               

               
Cow position:
               
chr10:24971235-24971347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
113
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
123-235
               

               
Cow position:
               
chr10:59417144-59417256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
113
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
123-272
               

               
Cow position:
               
chr10:49253454-49253308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
147, 98
               

               
Conread position:
               
123-306
               

               
Cow position:
               
chr10:43586192-43586377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
123-356
               

               
Cow position:
               
chr10:58451283-58451515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
117, 48
               

               
Conread position:
               
123-394
               

               
Cow position:
               
chr10:11463574-11463850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
11, 37
               

               
Conread position:
               
123-497
               

               
Cow position:
               
chr10:5889673-5890053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 14
               

               
Conread position:
               
123-553
               

               
Cow position:
               
chr10:20897379-20896961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
191, 57
               

               
Conread position:
               
123-594
               

               
Cow position:
               
chr10:59675163-59675634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 121
               

               
Conread position:
               
123-595
               

               
Cow position:
               
chr10:39875062-39875518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
370
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
255, 120
               

               
Conread position:
               
123-610
               

               
Cow position:
               
chr10:21447818-21448293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
394, 94
               

               
Conread position:
               
123-612
               

               
Cow position:
               
chr10:33665934-33665443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
373
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
159, 261
               

               
Conread position:
               
123-621
               

               
Cow position:
               
chr10:20095857-20095353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
400
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 354
               

               
Conread position:
               
123-623
               

               
Cow position:
               
chr10:50109814-50110316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 11
               

               
Conread position:
               
123-623
               

               
Cow position:
               
chr10:52046962-52046452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
380
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 130
               

               
Conread position:
               
124-393
               

               
Cow position:
               
chr10:33240592-33240857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
117, 33
               

               
Conread position:
               
124-495
               

               
Cow position:
               
chr10:28038843-28039212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
24, 38
               

               
Conread position:
               
124-495
               

               
Cow position:
               
chr10:48255134-48255504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
21, 29
               

               
Conread position:
               
124-503
               

               
Cow position:
               
chr10:3115574-3115199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
23, 53
               

               
Conread position:
               
124-543
               

               
Cow position:
               
chr10:68829194-68829595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
20, 34
               

               
Conread position:
               
124-589
               

               
Cow position:
               
chr10:6852354-6851895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 75
               

               
Conread position:
               
124-608
               

               
Cow position:
               
chr10:21657510-21657029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
386
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
153, 13
               

               
Conread position:
               
124-610
               

               
Cow position:
               
chr10:52589591-52590079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
90, 81
               

               
Conread position:
               
124-610
               

               
Cow position:
               
chr10:60961024-60960542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
226, 9
               

               
Conread position:
               
124-612
               

               
Cow position:
               
chr10:36002288-36001806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 35
               

               
Conread position:
               
124-623
               

               
Cow position:
               
chr10:59588091-59588581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
510
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 26
               

               
Conread position:
               
124-625
               

               
Cow position:
               
chr10:38944345-38943845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 17
               

               
Conread position:
               
124-630
               

               
Cow position:
               
chr10:29279536-29279045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
516
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 263
               

               
Conread position:
               
124-632
               

               
Cow position:
               
chr10:32584002-32583499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 117
               

               
Conread position:
               
124-633
               

               
Cow position:
               
chr10:31779178-31779666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
26, 40
               

               
Conread position:
               
124-634
               

               
Cow position:
               
chr10:23096686-23097199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
533
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
72, 116
               

               
Conread position:
               
125-284
               

               
Cow position:
               
chr10:11047115-11047268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
34, 26
               

               
Conread position:
               
125-309
               

               
Cow position:
               
chr10:34646357-34646541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
127, 116
               

               
Conread position:
               
125-333
               

               
Cow position:
               
chr10:29379869-29380082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
124, 75
               

               
Conread position:
               
125-343
               

               
Cow position:
               
chr10:52881530-52881750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
19, 8
               

               
Conread position:
               
125-345
               

               
Cow position:
               
chr10:3364093-3364309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
103, 127
               

               
Conread position:
               
125-351
               

               
Cow position:
               
chr10:15309313-15309535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
66, 144
               

               
Conread position:
               
125-376
               

               
Cow position:
               
chr10:30613916-30613675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
183, 115
               

               
Conread position:
               
125-473
               

               
Cow position:
               
chr10:23576635-23576284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
152, 54
               

               
Conread position:
               
125-484
               

               
Cow position:
               
chr10:17863675-17863314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
144, 190
               

               
Conread position:
               
125-505
               

               
Cow position:
               
chr10:49923284-49923644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
253, 118
               

               
Conread position:
               
125-512
               

               
Cow position:
               
chr10:27828411-27828032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
305, 138
               

               
Conread position:
               
125-521
               

               
Cow position:
               
chr10:37668067-37668467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
188, 33
               

               
Conread position:
               
125-575
               

               
Cow position:
               
chr10:44421816-44422253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
423, 75
               

               
Conread position:
               
125-590
               

               
Cow position:
               
chr10:3998999-3998533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 262
               

               
Conread position:
               
125-609
               

               
Cow position:
               
chr10:53674915-53674427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
392
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
180, 256
               

               
Conread position:
               
125-625
               

               
Cow position:
               
chr10:37818468-37818975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
395
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 12
               

               
Conread position:
               
125-630
               

               
Cow position:
               
chr10:37529176-37529694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
525
               

               
Alignm identity:
               
401
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
188, 88
               

               
Conread position:
               
125-633
               

               
Cow position:
               
chr10:29339307-29339810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
524
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 95
               

               
Conread position:
               
125-659
               

               
Cow position:
               
chr10:22472414-22471868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
554
               

               
Alignm identity:
               
382
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 143
               

               
Conread position:
               
126-353
               

               
Cow position:
               
chr10:60446819-60446592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
82, 10
               

               
Conread position:
               
126-354
               

               
Cow position:
               
chr10:53076202-53075980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
187, 137
               

               
Conread position:
               
126-386
               

               
Cow position:
               
chr10:37295584-37295838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
187, 114
               

               
Conread position:
               
126-612
               

               
Cow position:
               
chr10:35731439-35731928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
380
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 72
               

               
Conread position:
               
126-621
               

               
Cow position:
               
chr10:28395213-28395695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
376
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 130
               

               
Conread position:
               
126-621
               

               
Cow position:
               
chr10:31362125-31362617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
387
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
252, 125
               

               
Conread position:
               
126-624
               

               
Cow position:
               
chr10:24276637-24277179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
546
               

               
Alignm identity:
               
375
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 108
               

               
Conread position:
               
127-379
               

               
Cow position:
               
chr10:41254490-41254738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
150, 18
               

               
Conread position:
               
128-306
               

               
Cow position:
               
chr10:30746758-30746592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
128-363
               

               
Cow position:
               
chr10:31116760-31116535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
128-506
               

               
Cow position:
               
chr10:58259439-58259807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
186, 24
               

               
Conread position:
               
128-610
               

               
Cow position:
               
chr10:11221789-11221322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
172, 104
               

               
Conread position:
               
128-623
               

               
Cow position:
               
chr10:22321609-22321115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 129
               

               
Conread position:
               
129-354
               

               
Cow position:
               
chr10:69997715-69997944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
186, 0
               

               
Conread position:
               
129-610
               

               
Cow position:
               
chr10:24763568-24763077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
371
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 56
               

               
Conread position:
               
131-278
               

               
Cow position:
               
chr10:49060634-49060780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
131-304
               

               
Cow position:
               
chr10:17293348-17293522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
145, 0
               

               
Conread position:
               
131-309
               

               
Cow position:
               
chr10:60491183-60491351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
131-313
               

               
Cow position:
               
chr10:42230876-42230693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
109, 115
               

               
Conread position:
               
131-324
               

               
Cow position:
               
chr10:55395893-55396085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
109, 117
               

               
Conread position:
               
131-512
               

               
Cow position:
               
chr10:15318969-15318587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 136
               

               
Conread position:
               
131-526
               

               
Cow position:
               
chr10:13390964-13391363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
138, 164
               

               
Conread position:
               
131-547
               

               
Cow position:
               
chr10:23936560-23936149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
181, 80
               

               
Conread position:
               
131-610
               

               
Cow position:
               
chr10:10135071-10134579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 149
               

               
Conread position:
               
131-610
               

               
Cow position:
               
chr10:22527818-22528298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
378
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 113
               

               
Conread position:
               
131-612
               

               
Cow position:
               
chr10:60237012-60237517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
178, 61
               

               
Conread position:
               
132-328
               

               
Cow position:
               
chr10:61509861-61510052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
128, 0
               

               
Conread position:
               
132-395
               

               
Cow position:
               
chr10:48573597-48573876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
132, 143
               

               
Conread position:
               
133-394
               

               
Cow position:
               
chr10:47690469-47690210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
146, 130
               

               
Conread position:
               
133-483
               

               
Cow position:
               
chr10:20997206-20997545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
10, 31
               

               
Conread position:
               
133-503
               

               
Cow position:
               
chr10:13586785-13586425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
165, 131
               

               
Conread position:
               
133-504
               

               
Cow position:
               
chr10:46184821-46184483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
115, 87
               

               
Conread position:
               
133-610
               

               
Cow position:
               
chr10:53973923-53973455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
180, 65
               

               
Conread position:
               
133-638
               

               
Cow position:
               
chr10:65423823-65424324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
366
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
180, 33
               

               
Conread position:
               
134-497
               

               
Cow position:
               
chr10:57461437-57461083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 142
               

               
Conread position:
               
134-506
               

               
Cow position:
               
chr10:23055997-23056372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
179, 136
               

               
Conread position:
               
135-348
               

               
Cow position:
               
chr10:37068338-37068548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
102, 24
               

               
Conread position:
               
135-526
               

               
Cow position:
               
chr10:54504684-54504292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
165, 110
               

               
Conread position:
               
137-343
               

               
Cow position:
               
chr10:533609-533399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
103, 109
               

               
Conread position:
               
137-424
               

               
Cow position:
               
chr10:50134726-50135021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
102, 143
               

               
Conread position:
               
137-445
               

               
Cow position:
               
chr10:47412029-47412339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
135, 61
               

               
Conread position:
               
137-505
               

               
Cow position:
               
chr10:38014443-38014082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 15
               

               
Conread position:
               
137-554
               

               
Cow position:
               
chr10:1749662-1749235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
160, 83
               

               
Conread position:
               
137-626
               

               
Cow position:
               
chr10:8923357-8922864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
506
               

               
Alignm identity:
               
380
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 134
               

               
Conread position:
               
138-480
               

               
Cow position:
               
chr10:2853564-2853909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
150, 13
               

               
Conread position:
               
138-506
               

               
Cow position:
               
chr10:41941488-41941872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 136
               

               
Conread position:
               
139-496
               

               
Cow position:
               
chr10:53934677-53935022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
184, 82
               

               
Conread position:
               
139-610
               

               
Cow position:
               
chr10:6505427-6504953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
239, 116
               

               
Conread position:
               
141-399
               

               
Cow position:
               
chr10:747542-747276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
96, 10
               

               
Conread position:
               
141-402
               

               
Cow position:
               
chr10:48513009-48513275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
96, 10
               

               
Conread position:
               
141-437
               

               
Cow position:
               
chr10:11576841-11576546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
82, 10
               

               
Conread position:
               
141-473
               

               
Cow position:
               
chr10:61511253-61510933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
184, 10
               

               
Conread position:
               
141-544
               

               
Cow position:
               
chr10:29360991-29360578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
96, 10
               

               
Conread position:
               
141-576
               

               
Cow position:
               
chr10:27716768-27717202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
200, 10
               

               
Conread position:
               
141-621
               

               
Cow position:
               
chr10:46829938-46829470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 11
               

               
Conread position:
               
141-622
               

               
Cow position:
               
chr10:38942504-38942023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 10
               

               
Conread position:
               
146-424
               

               
Cow position:
               
chr10:24781257-24780979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 106
               

               
Conread position:
               
146-444
               

               
Cow position:
               
chr10:5264879-5264587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
166, 51
               

               
Conread position:
               
146-626
               

               
Cow position:
               
chr10:38725723-38725259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
369
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 51
               

               
Conread position:
               
149-582
               

               
Cow position:
               
chr10:805255-804824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
153, 19
               

               
Conread position:
               
150-623
               

               
Cow position:
               
chr10:24307859-24308308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 72
               

               
Conread position:
               
151-627
               

               
Cow position:
               
chr10:52569655-52569181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 93
               

               
Conread position:
               
151-638
               

               
Cow position:
               
chr10:42755386-42754915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
90, 23
               

               
Conread position:
               
154-610
               

               
Cow position:
               
chr10:10964048-10963577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
150, 86
               

               
Conread position:
               
157-473
               

               
Cow position:
               
chr10:24560930-24561246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
156, 106
               

               
Conread position:
               
157-477
               

               
Cow position:
               
chr10:28176331-28176656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
83, 66
               

               
Conread position:
               
157-495
               

               
Cow position:
               
chr10:24744603-24744277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
221, 252
               

               
Conread position:
               
157-630
               

               
Cow position:
               
chr10:24548307-24547839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
158, 52
               

               
Conread position:
               
158-403
               

               
Cow position:
               
chr10:42892914-42893157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
119, 50
               

               
Conread position:
               
158-414
               

               
Cow position:
               
chr10:66199654-66199905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
157, 66
               

               
Conread position:
               
160-487
               

               
Cow position:
               
chr10:29588785-29589115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
187, 112
               

               
Conread position:
               
160-610
               

               
Cow position:
               
chr10:40147578-40148034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 87
               

               
Conread position:
               
160-610
               

               
Cow position:
               
chr10:54469339-54469780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
152, 130
               

               
Conread position:
               
163-402
               

               
Cow position:
               
chr10:4148541-4148288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
76, 246
               

               
Conread position:
               
163-522
               

               
Cow position:
               
chr10:15462543-15462190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
150, 230
               

               
Conread position:
               
163-561
               

               
Cow position:
               
chr10:29188304-29188709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 76
               

               
Conread position:
               
163-598
               

               
Cow position:
               
chr10:13368404-13367969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 79
               

               
Conread position:
               
163-610
               

               
Cow position:
               
chr10:23886408-23886843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
381, 98
               

               
Conread position:
               
167-623
               

               
Cow position:
               
chr10:10469027-10468565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 38
               

               
Conread position:
               
168-424
               

               
Cow position:
               
chr10:39303800-39304062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
55, 79
               

               
Conread position:
               
168-518
               

               
Cow position:
               
chr10:35767043-35767382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 42
               

               
Conread position:
               
169-610
               

               
Cow position:
               
chr10:1428085-1427643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 96
               

               
Conread position:
               
169-623
               

               
Cow position:
               
chr10:12392561-12393008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 96
               

               
Conread position:
               
169-634
               

               
Cow position:
               
chr10:38518582-38519053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 68
               

               
Conread position:
               
171-610
               

               
Cow position:
               
chr10:32775143-32774718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 96
               

               
Conread position:
               
172-424
               

               
Cow position:
               
chr10:45679060-45678803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
65, 90
               

               
Conread position:
               
172-610
               

               
Cow position:
               
chr10:56835332-56834881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 43
               

               
Conread position:
               
173-627
               

               
Cow position:
               
chr10:41408316-41407884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 71
               

               
Conread position:
               
174-504
               

               
Cow position:
               
chr10:65072075-65072400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
90, 63
               

               
Conread position:
               
175-610
               

               
Cow position:
               
chr10:33215843-33215399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 274
               

               
Conread position:
               
177-570
               

               
Cow position:
               
chr10:22520124-22520522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 98
               

               
Conread position:
               
177-631
               

               
Cow position:
               
chr10:29816640-29816167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 307
               

               
Conread position:
               
178-480
               

               
Cow position:
               
chr10:32029796-32030092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
137, 88
               

               
Conread position:
               
185-597
               

               
Cow position:
               
chr10:34898008-34897609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 59
               

               
Conread position:
               
196-335
               

               
Cow position:
               
chr10:16641948-16642085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
204-610
               

               
Cow position:
               
chr10:55580263-55580656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 96
               
Show alignments to all cow chromosomes.