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Cow genome map

           
Conread name:
           
Lym2-sn37_F04.f
        

               
Conread position:
               
71-520
               

               
Cow position:
               
chr17:11664374-11664829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 43
               

               
Conread position:
               
89-532
               

               
Cow position:
               
chr17:17059609-17059187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 7
               

               
Conread position:
               
96-307
               

               
Cow position:
               
chr17:8815378-8815164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
17, 190
               

               
Conread position:
               
101-503
               

               
Cow position:
               
chr17:37481896-37482312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
16, 29
               

               
Conread position:
               
102-376
               

               
Cow position:
               
chr17:14652605-14652879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
12, 28
               

               
Conread position:
               
102-506
               

               
Cow position:
               
chr17:35126883-35126487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 73
               

               
Conread position:
               
102-626
               

               
Cow position:
               
chr17:29157594-29157080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
536
               

               
Alignm identity:
               
390
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 32
               

               
Conread position:
               
108-583
               

               
Cow position:
               
chr17:17406308-17405816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
501
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 81
               

               
Conread position:
               
109-308
               

               
Cow position:
               
chr17:29995264-29995465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
111-239
               

               
Cow position:
               
chr17:42697465-42697334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
111-239
               

               
Cow position:
               
chr17:42744627-42744496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
111-379
               

               
Cow position:
               
chr17:10561803-10561528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
8, 132
               

               
Conread position:
               
111-612
               

               
Cow position:
               
chr17:17222509-17222010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
510
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 138
               

               
Conread position:
               
112-235
               

               
Cow position:
               
chr17:21677059-21676934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
112-254
               

               
Cow position:
               
chr17:18109381-18109524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
112-306
               

               
Cow position:
               
chr17:7577764-7577565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
145, 0
               

               
Conread position:
               
112-313
               

               
Cow position:
               
chr17:25800716-25800914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
101, 47
               

               
Conread position:
               
112-323
               

               
Cow position:
               
chr17:25126518-25126310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
8, 152
               

               
Conread position:
               
112-325
               

               
Cow position:
               
chr17:18934426-18934213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
128, 89
               

               
Conread position:
               
112-325
               

               
Cow position:
               
chr17:21039724-21039516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
201, 143
               

               
Conread position:
               
112-334
               

               
Cow position:
               
chr17:5372358-5372582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
8, 145
               

               
Conread position:
               
112-354
               

               
Cow position:
               
chr17:9824835-9824592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
151, 20
               

               
Conread position:
               
112-376
               

               
Cow position:
               
chr17:35573919-35573664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
8, 21
               

               
Conread position:
               
112-393
               

               
Cow position:
               
chr17:31856838-31856545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
201, 36
               

               
Conread position:
               
112-441
               

               
Cow position:
               
chr17:1562621-1562936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
266, 20
               

               
Conread position:
               
112-456
               

               
Cow position:
               
chr17:32273518-32273861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 157
               

               
Conread position:
               
112-465
               

               
Cow position:
               
chr17:908907-908560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
201, 129
               

               
Conread position:
               
112-495
               

               
Cow position:
               
chr17:12325598-12325962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
266, 154
               

               
Conread position:
               
112-495
               

               
Cow position:
               
chr17:25097623-25097247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 51
               

               
Conread position:
               
112-497
               

               
Cow position:
               
chr17:24004540-24004177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 48
               

               
Conread position:
               
112-505
               

               
Cow position:
               
chr17:24587791-24587392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
196, 0
               

               
Conread position:
               
112-515
               

               
Cow position:
               
chr17:17410460-17410061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 22
               

               
Conread position:
               
112-591
               

               
Cow position:
               
chr17:14025743-14026229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 156
               

               
Conread position:
               
112-609
               

               
Cow position:
               
chr17:5768069-5767569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
376
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
264, 8
               

               
Conread position:
               
112-611
               

               
Cow position:
               
chr17:14033475-14033981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 39
               

               
Conread position:
               
112-612
               

               
Cow position:
               
chr17:18201923-18201442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
508
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 42
               

               
Conread position:
               
112-613
               

               
Cow position:
               
chr17:2810799-2810285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
527
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 155
               

               
Conread position:
               
112-623
               

               
Cow position:
               
chr17:30665436-30664926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
525
               

               
Alignm identity:
               
372
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
201, 34
               

               
Conread position:
               
113-238
               

               
Cow position:
               
chr17:9713176-9713301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
7, 20
               

               
Conread position:
               
113-276
               

               
Cow position:
               
chr17:17035115-17034952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
7, 20
               

               
Conread position:
               
113-286
               

               
Cow position:
               
chr17:43315125-43315294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
158, 18
               

               
Conread position:
               
113-293
               

               
Cow position:
               
chr17:37340868-37341053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
61, 16
               

               
Conread position:
               
113-298
               

               
Cow position:
               
chr17:24163202-24163020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
7, 20
               

               
Conread position:
               
113-305
               

               
Cow position:
               
chr17:12959274-12959081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
7, 136
               

               
Conread position:
               
113-308
               

               
Cow position:
               
chr17:18766827-18767020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
7, 135
               

               
Conread position:
               
113-310
               

               
Cow position:
               
chr17:17044169-17044362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
113-315
               

               
Cow position:
               
chr17:18847990-18848193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
23, 184
               

               
Conread position:
               
113-338
               

               
Cow position:
               
chr17:1025659-1025881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
7, 20
               

               
Conread position:
               
113-340
               

               
Cow position:
               
chr17:26575059-26575291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
78, 15
               

               
Conread position:
               
113-345
               

               
Cow position:
               
chr17:40639111-40638882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
7, 25
               

               
Conread position:
               
113-354
               

               
Cow position:
               
chr17:2275638-2275398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
7, 150
               

               
Conread position:
               
113-365
               

               
Cow position:
               
chr17:23516777-23517030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
7, 20
               

               
Conread position:
               
113-377
               

               
Cow position:
               
chr17:11912336-11912597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
7, 176
               

               
Conread position:
               
113-378
               

               
Cow position:
               
chr17:34751239-34751506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
7, 103
               

               
Conread position:
               
113-387
               

               
Cow position:
               
chr17:25616413-25616149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
202, 24
               

               
Conread position:
               
113-394
               

               
Cow position:
               
chr17:21325498-21325216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
200, 161
               

               
Conread position:
               
113-405
               

               
Cow position:
               
chr17:32349234-32348948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
7, 82
               

               
Conread position:
               
113-408
               

               
Cow position:
               
chr17:6318703-6318990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
265, 7
               

               
Conread position:
               
113-408
               

               
Cow position:
               
chr17:30728671-30728388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 150
               

               
Conread position:
               
113-425
               

               
Cow position:
               
chr17:20874563-20874249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
7, 125
               

               
Conread position:
               
113-447
               

               
Cow position:
               
chr17:24822027-24821698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 100
               

               
Conread position:
               
113-453
               

               
Cow position:
               
chr17:3467916-3467595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
143, 7
               

               
Conread position:
               
113-460
               

               
Cow position:
               
chr17:265834-265475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
259, 7
               

               
Conread position:
               
113-474
               

               
Cow position:
               
chr17:20071933-20072270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 0
               

               
Conread position:
               
113-486
               

               
Cow position:
               
chr17:27429731-27429371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 20
               

               
Conread position:
               
113-497
               

               
Cow position:
               
chr17:25128187-25128567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
195, 148
               

               
Conread position:
               
113-497
               

               
Cow position:
               
chr17:33793329-33792964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
198, 84
               

               
Conread position:
               
113-498
               

               
Cow position:
               
chr17:11280934-11281326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 96
               

               
Conread position:
               
113-505
               

               
Cow position:
               
chr17:12219773-12220164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 21
               

               
Conread position:
               
113-509
               

               
Cow position:
               
chr17:15684676-15684275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
100, 152
               

               
Conread position:
               
113-512
               

               
Cow position:
               
chr17:7698213-7697822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 74
               

               
Conread position:
               
113-514
               

               
Cow position:
               
chr17:15340586-15340964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 20
               

               
Conread position:
               
113-526
               

               
Cow position:
               
chr17:18495354-18495754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
155, 85
               

               
Conread position:
               
113-533
               

               
Cow position:
               
chr17:18108921-18109340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 34
               

               
Conread position:
               
113-553
               

               
Cow position:
               
chr17:18473328-18472911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
272, 33
               

               
Conread position:
               
113-558
               

               
Cow position:
               
chr17:7810588-7811021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 131
               

               
Conread position:
               
113-610
               

               
Cow position:
               
chr17:1410073-1410579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
395
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
201, 28
               

               
Conread position:
               
113-610
               

               
Cow position:
               
chr17:9854143-9853653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
506
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 96
               

               
Conread position:
               
113-610
               

               
Cow position:
               
chr17:15102728-15103212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
378
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
267, 150
               

               
Conread position:
               
113-610
               

               
Cow position:
               
chr17:24824409-24823931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
385
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 165
               

               
Conread position:
               
113-610
               

               
Cow position:
               
chr17:29084343-29083873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
369
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 153
               

               
Conread position:
               
113-610
               

               
Cow position:
               
chr17:29715037-29715519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
371
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 78
               

               
Conread position:
               
113-610
               

               
Cow position:
               
chr17:32138257-32138730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
501
               

               
Alignm identity:
               
366
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 151
               

               
Conread position:
               
113-610
               

               
Cow position:
               
chr17:33933576-33934079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
390
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 274
               

               
Conread position:
               
113-611
               

               
Cow position:
               
chr17:24883407-24883897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
506
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
200, 24
               

               
Conread position:
               
113-612
               

               
Cow position:
               
chr17:21972964-21973466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
510
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 21
               

               
Conread position:
               
113-623
               

               
Cow position:
               
chr17:13922655-13922130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
532
               

               
Alignm identity:
               
387
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 161
               

               
Conread position:
               
113-623
               

               
Cow position:
               
chr17:14003991-14003481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
526
               

               
Alignm identity:
               
372
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 21
               

               
Conread position:
               
113-625
               

               
Cow position:
               
chr17:32989640-32989147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
397
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
431, 7
               

               
Conread position:
               
113-625
               

               
Cow position:
               
chr17:32993460-32993959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
403
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
431, 7
               

               
Conread position:
               
113-631
               

               
Cow position:
               
chr17:29292217-29292724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
533
               

               
Alignm identity:
               
382
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
202, 7
               

               
Conread position:
               
114-259
               

               
Cow position:
               
chr17:20392311-20392171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
104, 7
               

               
Conread position:
               
114-297
               

               
Cow position:
               
chr17:30213050-30212869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
149, 85
               

               
Conread position:
               
114-379
               

               
Cow position:
               
chr17:35338756-35339017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
199, 143
               

               
Conread position:
               
114-428
               

               
Cow position:
               
chr17:18146350-18146033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
199, 152
               

               
Conread position:
               
114-530
               

               
Cow position:
               
chr17:21003665-21004082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 47
               

               
Conread position:
               
114-634
               

               
Cow position:
               
chr17:25901365-25900841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
532
               

               
Alignm identity:
               
398
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
158, 284
               

               
Conread position:
               
115-310
               

               
Cow position:
               
chr17:21472026-21472204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
115-369
               

               
Cow position:
               
chr17:21489462-21489716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
113, 18
               

               
Conread position:
               
116-488
               

               
Cow position:
               
chr17:25032320-25032681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
266, 18
               

               
Conread position:
               
117-325
               

               
Cow position:
               
chr17:33154992-33155197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
7, 112
               

               
Conread position:
               
117-376
               

               
Cow position:
               
chr17:3354044-3353782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
133, 62
               

               
Conread position:
               
117-610
               

               
Cow position:
               
chr17:26231116-26230606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
516
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 53
               

               
Conread position:
               
118-399
               

               
Cow position:
               
chr17:6848954-6848681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
155, 15
               

               
Conread position:
               
118-476
               

               
Cow position:
               
chr17:9911919-9911566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 81
               

               
Conread position:
               
118-610
               

               
Cow position:
               
chr17:12929372-12929876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 16
               

               
Conread position:
               
118-610
               

               
Cow position:
               
chr17:20780676-20780186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 152
               

               
Conread position:
               
119-277
               

               
Cow position:
               
chr17:40276899-40276742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
38, 13
               

               
Conread position:
               
119-311
               

               
Cow position:
               
chr17:28814333-28814529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
121, 127
               

               
Conread position:
               
119-328
               

               
Cow position:
               
chr17:25511404-25511194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
144, 67
               

               
Conread position:
               
119-340
               

               
Cow position:
               
chr17:12880753-12880538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
118, 14
               

               
Conread position:
               
119-352
               

               
Cow position:
               
chr17:36864789-36864556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
145, 13
               

               
Conread position:
               
119-354
               

               
Cow position:
               
chr17:22056869-22057099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
119-379
               

               
Cow position:
               
chr17:40852131-40851881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
55, 13
               

               
Conread position:
               
119-386
               

               
Cow position:
               
chr17:11215072-11215340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
121, 89
               

               
Conread position:
               
119-396
               

               
Cow position:
               
chr17:20884682-20884402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
25, 14
               

               
Conread position:
               
119-400
               

               
Cow position:
               
chr17:39857544-39857268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
230, 14
               

               
Conread position:
               
119-414
               

               
Cow position:
               
chr17:40673529-40673247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
25, 14
               

               
Conread position:
               
119-426
               

               
Cow position:
               
chr17:6329274-6328961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
118, 14
               

               
Conread position:
               
119-461
               

               
Cow position:
               
chr17:3577696-3577356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
151, 13
               

               
Conread position:
               
119-469
               

               
Cow position:
               
chr17:12536306-12536658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 13
               

               
Conread position:
               
119-474
               

               
Cow position:
               
chr17:33275591-33275941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
159, 14
               

               
Conread position:
               
119-480
               

               
Cow position:
               
chr17:5006325-5006692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 95
               

               
Conread position:
               
119-482
               

               
Cow position:
               
chr17:29356081-29356423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
30, 14
               

               
Conread position:
               
119-489
               

               
Cow position:
               
chr17:20932490-20932126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
194, 13
               

               
Conread position:
               
119-497
               

               
Cow position:
               
chr17:21738715-21739102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
194, 14
               

               
Conread position:
               
119-502
               

               
Cow position:
               
chr17:20157766-20157394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 14
               

               
Conread position:
               
119-508
               

               
Cow position:
               
chr17:23246357-23245982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 13
               

               
Conread position:
               
119-512
               

               
Cow position:
               
chr17:6423924-6423527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 301
               

               
Conread position:
               
119-545
               

               
Cow position:
               
chr17:9746671-9746251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
194, 13
               

               
Conread position:
               
119-555
               

               
Cow position:
               
chr17:5422908-5423352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 251
               

               
Conread position:
               
119-592
               

               
Cow position:
               
chr17:34078952-34079413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 33
               

               
Conread position:
               
119-609
               

               
Cow position:
               
chr17:21680938-21680436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 14
               

               
Conread position:
               
119-610
               

               
Cow position:
               
chr17:11618743-11618247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 33
               

               
Conread position:
               
119-610
               

               
Cow position:
               
chr17:21495531-21495044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
501
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 114
               

               
Conread position:
               
119-610
               

               
Cow position:
               
chr17:32027293-32027795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 14
               

               
Conread position:
               
119-612
               

               
Cow position:
               
chr17:8690294-8690786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
194, 12
               

               
Conread position:
               
119-612
               

               
Cow position:
               
chr17:21335534-21336032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
158, 18
               

               
Conread position:
               
119-612
               

               
Cow position:
               
chr17:25189444-25188948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
508
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 14
               

               
Conread position:
               
119-623
               

               
Cow position:
               
chr17:24554156-24553656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
387
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
196, 136
               

               
Conread position:
               
119-627
               

               
Cow position:
               
chr17:979008-979486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
194, 14
               

               
Conread position:
               
119-633
               

               
Cow position:
               
chr17:5900528-5900031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
528
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
30, 14
               

               
Conread position:
               
120-298
               

               
Cow position:
               
chr17:11478928-11478748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
140, 0
               

               
Conread position:
               
120-491
               

               
Cow position:
               
chr17:40741810-40741435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 31
               

               
Conread position:
               
120-492
               

               
Cow position:
               
chr17:4225345-4225704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
193, 47
               

               
Conread position:
               
120-493
               

               
Cow position:
               
chr17:32471623-32472005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
162, 13
               

               
Conread position:
               
120-525
               

               
Cow position:
               
chr17:552809-553210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
39, 13
               

               
Conread position:
               
120-595
               

               
Cow position:
               
chr17:43141551-43142038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 35
               

               
Conread position:
               
120-596
               

               
Cow position:
               
chr17:1060887-1061377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
371
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 325
               

               
Conread position:
               
121-454
               

               
Cow position:
               
chr17:12591332-12590988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
121-505
               

               
Cow position:
               
chr17:11831957-11832362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 369
               

               
Conread position:
               
121-610
               

               
Cow position:
               
chr17:17060524-17061005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 38
               

               
Conread position:
               
121-612
               

               
Cow position:
               
chr17:18592600-18592102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
501
               

               
Alignm identity:
               
376
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
155, 186
               

               
Conread position:
               
122-340
               

               
Cow position:
               
chr17:34790907-34791129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
87, 153
               

               
Conread position:
               
122-345
               

               
Cow position:
               
chr17:22051433-22051661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
130, 150
               

               
Conread position:
               
122-447
               

               
Cow position:
               
chr17:1634335-1634650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 195
               

               
Conread position:
               
122-452
               

               
Cow position:
               
chr17:20990033-20990367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 70
               

               
Conread position:
               
122-501
               

               
Cow position:
               
chr17:32418959-32419340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
191, 141
               

               
Conread position:
               
122-504
               

               
Cow position:
               
chr17:27048312-27047938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 70
               

               
Conread position:
               
122-505
               

               
Cow position:
               
chr17:24786867-24787247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 54
               

               
Conread position:
               
122-505
               

               
Cow position:
               
chr17:36791283-36790922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
118, 80
               

               
Conread position:
               
122-541
               

               
Cow position:
               
chr17:21114797-21115207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 161
               

               
Conread position:
               
122-561
               

               
Cow position:
               
chr17:18720293-18720728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 24
               

               
Conread position:
               
122-586
               

               
Cow position:
               
chr17:40331921-40331460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
170, 76
               

               
Conread position:
               
122-591
               

               
Cow position:
               
chr17:38833200-38832730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 96
               

               
Conread position:
               
122-602
               

               
Cow position:
               
chr17:20022357-20022842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
190, 264
               

               
Conread position:
               
122-610
               

               
Cow position:
               
chr17:24580138-24580614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
155, 57
               

               
Conread position:
               
122-610
               

               
Cow position:
               
chr17:26765180-26764684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
384
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 126
               

               
Conread position:
               
122-610
               

               
Cow position:
               
chr17:33288500-33288987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
374
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
419, 220
               

               
Conread position:
               
122-612
               

               
Cow position:
               
chr17:20848679-20848201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 42
               

               
Conread position:
               
122-625
               

               
Cow position:
               
chr17:23101062-23101558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
516
               

               
Alignm identity:
               
395
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
205, 129
               

               
Conread position:
               
123-313
               

               
Cow position:
               
chr17:32332935-32333124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
133, 153
               

               
Conread position:
               
123-351
               

               
Cow position:
               
chr17:12510824-12511049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
190, 18
               

               
Conread position:
               
123-453
               

               
Cow position:
               
chr17:27058402-27058728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
190, 14
               

               
Conread position:
               
123-475
               

               
Cow position:
               
chr17:12108959-12108608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
132, 11
               

               
Conread position:
               
123-496
               

               
Cow position:
               
chr17:11156339-11156710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 10
               

               
Conread position:
               
123-577
               

               
Cow position:
               
chr17:5224557-5224103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 96
               

               
Conread position:
               
123-605
               

               
Cow position:
               
chr17:27795809-27795320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 20
               

               
Conread position:
               
124-277
               

               
Cow position:
               
chr17:42150546-42150394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
146, 0
               

               
Conread position:
               
124-317
               

               
Cow position:
               
chr17:33164664-33164853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
124-354
               

               
Cow position:
               
chr17:40406599-40406367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
146, 121
               

               
Conread position:
               
124-437
               

               
Cow position:
               
chr17:31037222-31037538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 270
               

               
Conread position:
               
124-525
               

               
Cow position:
               
chr17:16371410-16371004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 34
               

               
Conread position:
               
124-543
               

               
Cow position:
               
chr17:26818304-26818716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
254, 22
               

               
Conread position:
               
124-567
               

               
Cow position:
               
chr17:13243895-13244310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
189, 65
               

               
Conread position:
               
124-586
               

               
Cow position:
               
chr17:30718263-30718725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
190, 268
               

               
Conread position:
               
124-610
               

               
Cow position:
               
chr17:12289255-12289752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
507
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 9
               

               
Conread position:
               
124-612
               

               
Cow position:
               
chr17:39736329-39735851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 96
               

               
Conread position:
               
124-627
               

               
Cow position:
               
chr17:13940167-13940671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
516
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 46
               

               
Conread position:
               
125-262
               

               
Cow position:
               
chr17:29075930-29076066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
125-302
               

               
Cow position:
               
chr17:45296563-45296394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
125-306
               

               
Cow position:
               
chr17:25473126-25473304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
112, 119
               

               
Conread position:
               
125-313
               

               
Cow position:
               
chr17:8948809-8948996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
40, 104
               

               
Conread position:
               
125-322
               

               
Cow position:
               
chr17:40412737-40412543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
191, 117
               

               
Conread position:
               
125-348
               

               
Cow position:
               
chr17:3153421-3153642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
188, 54
               

               
Conread position:
               
125-384
               

               
Cow position:
               
chr17:21757987-21758245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
188, 138
               

               
Conread position:
               
125-399
               

               
Cow position:
               
chr17:7803021-7803295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
26, 34
               

               
Conread position:
               
125-438
               

               
Cow position:
               
chr17:28468276-28467977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
125-561
               

               
Cow position:
               
chr17:19891778-19891333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 37
               

               
Conread position:
               
125-621
               

               
Cow position:
               
chr17:9697528-9698060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
537
               

               
Alignm identity:
               
379
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 172
               

               
Conread position:
               
126-454
               

               
Cow position:
               
chr17:10458779-10459111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 144
               

               
Conread position:
               
126-464
               

               
Cow position:
               
chr17:25612243-25611908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
174, 166
               

               
Conread position:
               
126-484
               

               
Cow position:
               
chr17:41891909-41892276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 19
               

               
Conread position:
               
126-537
               

               
Cow position:
               
chr17:29363208-29363618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
115, 209
               

               
Conread position:
               
128-392
               

               
Cow position:
               
chr17:1040895-1040629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
112, 20
               

               
Conread position:
               
128-562
               

               
Cow position:
               
chr17:22032544-22032968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
185, 76
               

               
Conread position:
               
128-594
               

               
Cow position:
               
chr17:40421822-40421352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 118
               

               
Conread position:
               
128-600
               

               
Cow position:
               
chr17:5000437-5000900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
187, 99
               

               
Conread position:
               
131-286
               

               
Cow position:
               
chr17:21466115-21466269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
128, 0
               

               
Conread position:
               
131-298
               

               
Cow position:
               
chr17:9932152-9932319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
131-399
               

               
Cow position:
               
chr17:33657921-33658190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
109, 30
               

               
Conread position:
               
131-528
               

               
Cow position:
               
chr17:21243642-21244042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
250, 71
               

               
Conread position:
               
131-541
               

               
Cow position:
               
chr17:7760325-7760732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
183, 77
               

               
Conread position:
               
131-610
               

               
Cow position:
               
chr17:30539122-30539582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
196, 21
               

               
Conread position:
               
132-267
               

               
Cow position:
               
chr17:11306356-11306221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
132-380
               

               
Cow position:
               
chr17:25502257-25502007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
132, 73
               

               
Conread position:
               
132-590
               

               
Cow position:
               
chr17:9117791-9117335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 90
               

               
Conread position:
               
133-328
               

               
Cow position:
               
chr17:16158637-16158445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
128, 0
               

               
Conread position:
               
133-359
               

               
Cow position:
               
chr17:38263344-38263568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
16, 25
               

               
Conread position:
               
133-623
               

               
Cow position:
               
chr17:18860578-18861067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
372
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 13
               

               
Conread position:
               
133-629
               

               
Cow position:
               
chr17:20992896-20993391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
508
               

               
Alignm identity:
               
373
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 31
               

               
Conread position:
               
134-558
               

               
Cow position:
               
chr17:11172471-11172898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
161, 24
               

               
Conread position:
               
135-365
               

               
Cow position:
               
chr17:27202902-27203132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
14, 24
               

               
Conread position:
               
137-376
               

               
Cow position:
               
chr17:40250562-40250327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
178, 34
               

               
Conread position:
               
137-543
               

               
Cow position:
               
chr17:3503723-3503314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 87
               

               
Conread position:
               
138-333
               

               
Cow position:
               
chr17:22048647-22048844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
122, 0
               

               
Conread position:
               
138-411
               

               
Cow position:
               
chr17:26233690-26233962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
96, 13
               

               
Conread position:
               
138-478
               

               
Cow position:
               
chr17:21434591-21434928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
94, 13
               

               
Conread position:
               
139-359
               

               
Cow position:
               
chr17:11368710-11368932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
174, 40
               

               
Conread position:
               
140-543
               

               
Cow position:
               
chr17:11277890-11278286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 11
               

               
Conread position:
               
141-456
               

               
Cow position:
               
chr17:24149321-24149000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
96, 10
               

               
Conread position:
               
141-465
               

               
Cow position:
               
chr17:36454644-36454950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
97, 10
               

               
Conread position:
               
141-477
               

               
Cow position:
               
chr17:1256363-1256702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
96, 12
               

               
Conread position:
               
142-420
               

               
Cow position:
               
chr17:24928611-24928338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
121, 9
               

               
Conread position:
               
143-379
               

               
Cow position:
               
chr17:23563659-23563891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
51, 140
               

               
Conread position:
               
143-582
               

               
Cow position:
               
chr17:20090501-20090923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 98
               

               
Conread position:
               
147-543
               

               
Cow position:
               
chr17:17951363-17950979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
199, 74
               

               
Conread position:
               
151-437
               

               
Cow position:
               
chr17:14761994-14762277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
150, 112
               

               
Conread position:
               
151-622
               

               
Cow position:
               
chr17:10528600-10529091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
151-627
               

               
Cow position:
               
chr17:23063847-23063366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 44
               

               
Conread position:
               
154-435
               

               
Cow position:
               
chr17:4968237-4967954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
158, 113
               

               
Conread position:
               
158-284
               

               
Cow position:
               
chr17:32192732-32192857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
106, 0
               

               
Conread position:
               
158-386
               

               
Cow position:
               
chr17:23798402-23798171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
82, 88
               

               
Conread position:
               
158-490
               

               
Cow position:
               
chr17:31231002-31231325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 35
               

               
Conread position:
               
159-488
               

               
Cow position:
               
chr17:38647181-38646859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 225
               

               
Conread position:
               
163-399
               

               
Cow position:
               
chr17:7137095-7136858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
60, 76
               

               
Conread position:
               
163-477
               

               
Cow position:
               
chr17:24490657-24490323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
74, 81
               

               
Conread position:
               
163-577
               

               
Cow position:
               
chr17:38615076-38614660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 76
               

               
Conread position:
               
163-612
               

               
Cow position:
               
chr17:30529429-30529864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 74
               

               
Conread position:
               
165-298
               

               
Cow position:
               
chr17:21793739-21793870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
113, 61
               

               
Conread position:
               
168-491
               

               
Cow position:
               
chr17:1275634-1275307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 30
               

               
Conread position:
               
168-610
               

               
Cow position:
               
chr17:25541706-25542145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 76
               

               
Conread position:
               
169-441
               

               
Cow position:
               
chr17:7142971-7142702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
145, 94
               

               
Conread position:
               
170-482
               

               
Cow position:
               
chr17:12447283-12447601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 121
               

               
Conread position:
               
170-608
               

               
Cow position:
               
chr17:11839831-11839370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 51
               

               
Conread position:
               
171-308
               

               
Cow position:
               
chr17:35140989-35141125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
103, 0
               

               
Conread position:
               
171-391
               

               
Cow position:
               
chr17:7654344-7654568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
69, 75
               

               
Conread position:
               
171-610
               

               
Cow position:
               
chr17:14248902-14249366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
67, 57
               

               
Conread position:
               
172-515
               

               
Cow position:
               
chr17:29080650-29080330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
65, 51
               

               
Conread position:
               
172-581
               

               
Cow position:
               
chr17:20889478-20889071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 43
               

               
Conread position:
               
172-624
               

               
Cow position:
               
chr17:18490647-18490188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 67
               

               
Conread position:
               
174-609
               

               
Cow position:
               
chr17:20083417-20083844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 62
               

               
Conread position:
               
186-437
               

               
Cow position:
               
chr17:10020698-10020957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
127, 0
               

               
Conread position:
               
198-610
               

               
Cow position:
               
chr17:15333629-15334053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 48
               

               
Conread position:
               
456-641
               

               
Cow position:
               
chr17:27938038-27938225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
92, 153
               
Show alignments to all cow chromosomes.