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Cow genome map

           
Conread name:
           
Lym2-sn37_F04.f
        

               
Conread position:
               
91-623
               

               
Cow position:
               
chr21:643538-643011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
542
               

               
Alignm identity:
               
409
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 153
               

               
Conread position:
               
98-610
               

               
Cow position:
               
chr21:29069123-29069638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
522
               

               
Alignm identity:
               
399
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 23
               

               
Conread position:
               
100-337
               

               
Cow position:
               
chr21:29014361-29014597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
140, 13
               

               
Conread position:
               
102-421
               

               
Cow position:
               
chr21:30835564-30835245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
11, 120
               

               
Conread position:
               
102-459
               

               
Cow position:
               
chr21:18800335-18800686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 19
               

               
Conread position:
               
102-549
               

               
Cow position:
               
chr21:23321877-23322330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 34
               

               
Conread position:
               
102-623
               

               
Cow position:
               
chr21:7581706-7582231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
538
               

               
Alignm identity:
               
382
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 19
               

               
Conread position:
               
104-613
               

               
Cow position:
               
chr21:44565526-44566019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 16
               

               
Conread position:
               
106-518
               

               
Cow position:
               
chr21:33916-33506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 153
               

               
Conread position:
               
108-394
               

               
Cow position:
               
chr21:22465382-22465101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
202, 12
               

               
Conread position:
               
110-266
               

               
Cow position:
               
chr21:39393939-39393784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
45, 10
               

               
Conread position:
               
110-612
               

               
Cow position:
               
chr21:10151995-10151496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 10
               

               
Conread position:
               
111-462
               

               
Cow position:
               
chr21:28244661-28244315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
38, 48
               

               
Conread position:
               
112-281
               

               
Cow position:
               
chr21:17252790-17252953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
112-301
               

               
Cow position:
               
chr21:41287603-41287792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
8, 21
               

               
Conread position:
               
112-306
               

               
Cow position:
               
chr21:28600070-28599887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
112-307
               

               
Cow position:
               
chr21:9027505-9027309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
104, 34
               

               
Conread position:
               
112-307
               

               
Cow position:
               
chr21:19240682-19240880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
112-311
               

               
Cow position:
               
chr21:11057693-11057882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
112-313
               

               
Cow position:
               
chr21:7768628-7768425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
8, 22
               

               
Conread position:
               
112-317
               

               
Cow position:
               
chr21:71775-71571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
195, 8
               

               
Conread position:
               
112-357
               

               
Cow position:
               
chr21:868735-868982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
201, 8
               

               
Conread position:
               
112-374
               

               
Cow position:
               
chr21:40266311-40266046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
28, 50
               

               
Conread position:
               
112-491
               

               
Cow position:
               
chr21:14452424-14452041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
9, 47
               

               
Conread position:
               
112-497
               

               
Cow position:
               
chr21:23568418-23568013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
31, 35
               

               
Conread position:
               
112-504
               

               
Cow position:
               
chr21:41598001-41597613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 22
               

               
Conread position:
               
112-507
               

               
Cow position:
               
chr21:19259009-19258621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 97
               

               
Conread position:
               
112-508
               

               
Cow position:
               
chr21:45329761-45330146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
117, 8
               

               
Conread position:
               
112-518
               

               
Cow position:
               
chr21:30592121-30592514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
160, 8
               

               
Conread position:
               
112-561
               

               
Cow position:
               
chr21:3585179-3585617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 21
               

               
Conread position:
               
112-582
               

               
Cow position:
               
chr21:18568450-18568931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 21
               

               
Conread position:
               
112-609
               

               
Cow position:
               
chr21:11739932-11740439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
374
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
269, 8
               

               
Conread position:
               
112-610
               

               
Cow position:
               
chr21:37706225-37706727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
152, 181
               

               
Conread position:
               
112-611
               

               
Cow position:
               
chr21:4281690-4282175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
508
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 22
               

               
Conread position:
               
112-612
               

               
Cow position:
               
chr21:6834237-6833740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
202, 25
               

               
Conread position:
               
112-612
               

               
Cow position:
               
chr21:23587069-23586551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
523
               

               
Alignm identity:
               
371
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
209, 22
               

               
Conread position:
               
113-243
               

               
Cow position:
               
chr21:11182740-11182612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
113-259
               

               
Cow position:
               
chr21:5341907-5342051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
113-263
               

               
Cow position:
               
chr21:24875540-24875391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
95, 7
               

               
Conread position:
               
113-277
               

               
Cow position:
               
chr21:20163898-20163734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
7, 152
               

               
Conread position:
               
113-293
               

               
Cow position:
               
chr21:19868766-19868946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
7, 20
               

               
Conread position:
               
113-293
               

               
Cow position:
               
chr21:36682514-36682332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
7, 20
               

               
Conread position:
               
113-303
               

               
Cow position:
               
chr21:19359987-19360175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
7, 20
               

               
Conread position:
               
113-313
               

               
Cow position:
               
chr21:30980389-30980587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
7, 20
               

               
Conread position:
               
113-344
               

               
Cow position:
               
chr21:28919341-28919568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
127, 8
               

               
Conread position:
               
113-362
               

               
Cow position:
               
chr21:8426632-8426379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
194, 7
               

               
Conread position:
               
113-365
               

               
Cow position:
               
chr21:15544041-15544283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
200, 7
               

               
Conread position:
               
113-370
               

               
Cow position:
               
chr21:1511480-1511221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
7, 97
               

               
Conread position:
               
113-374
               

               
Cow position:
               
chr21:47719114-47719373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
7, 20
               

               
Conread position:
               
113-387
               

               
Cow position:
               
chr21:30256085-30256348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
113-425
               

               
Cow position:
               
chr21:30222532-30222218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
213, 7
               

               
Conread position:
               
113-436
               

               
Cow position:
               
chr21:10538066-10538398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
200, 147
               

               
Conread position:
               
113-447
               

               
Cow position:
               
chr21:957857-957521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
200, 7
               

               
Conread position:
               
113-447
               

               
Cow position:
               
chr21:10004695-10005031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
11, 84
               

               
Conread position:
               
113-461
               

               
Cow position:
               
chr21:41590376-41590716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
177, 0
               

               
Conread position:
               
113-487
               

               
Cow position:
               
chr21:9990699-9990329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
267, 128
               

               
Conread position:
               
113-503
               

               
Cow position:
               
chr21:27521151-27521526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
200, 77
               

               
Conread position:
               
113-505
               

               
Cow position:
               
chr21:29001968-29002365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 43
               

               
Conread position:
               
113-538
               

               
Cow position:
               
chr21:27568986-27569400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 7
               

               
Conread position:
               
113-544
               

               
Cow position:
               
chr21:29485167-29484744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 20
               

               
Conread position:
               
113-554
               

               
Cow position:
               
chr21:44825697-44826129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 200
               

               
Conread position:
               
113-561
               

               
Cow position:
               
chr21:33350930-33350484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 20
               

               
Conread position:
               
113-610
               

               
Cow position:
               
chr21:641774-641277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
508
               

               
Alignm identity:
               
392
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 7
               

               
Conread position:
               
113-610
               

               
Cow position:
               
chr21:29213969-29214465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
377
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 160
               

               
Conread position:
               
113-610
               

               
Cow position:
               
chr21:30250015-30250515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
387
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 25
               

               
Conread position:
               
113-610
               

               
Cow position:
               
chr21:32297332-32297812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
391
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
197, 16
               

               
Conread position:
               
113-610
               

               
Cow position:
               
chr21:37299651-37299154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
507
               

               
Alignm identity:
               
387
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
157, 195
               

               
Conread position:
               
113-611
               

               
Cow position:
               
chr21:46848939-46849430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
141, 95
               

               
Conread position:
               
113-623
               

               
Cow position:
               
chr21:30848752-30849264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
529
               

               
Alignm identity:
               
373
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 22
               

               
Conread position:
               
113-625
               

               
Cow position:
               
chr21:45473568-45474078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
525
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 134
               

               
Conread position:
               
113-628
               

               
Cow position:
               
chr21:82256-81744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
531
               

               
Alignm identity:
               
398
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 20
               

               
Conread position:
               
113-628
               

               
Cow position:
               
chr21:28429631-28429120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
528
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 16
               

               
Conread position:
               
113-628
               

               
Cow position:
               
chr21:34010209-34010714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
524
               

               
Alignm identity:
               
373
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 20
               

               
Conread position:
               
113-630
               

               
Cow position:
               
chr21:14760754-14760253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
527
               

               
Alignm identity:
               
367
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 21
               

               
Conread position:
               
114-373
               

               
Cow position:
               
chr21:33413902-33414158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
31, 7
               

               
Conread position:
               
114-386
               

               
Cow position:
               
chr21:22210057-22210332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
6, 152
               

               
Conread position:
               
114-485
               

               
Cow position:
               
chr21:37344915-37345285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
199, 6
               

               
Conread position:
               
114-610
               

               
Cow position:
               
chr21:30990100-30990578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
501
               

               
Alignm identity:
               
387
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
267, 20
               

               
Conread position:
               
114-610
               

               
Cow position:
               
chr21:42413910-42414409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
506
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 19
               

               
Conread position:
               
114-612
               

               
Cow position:
               
chr21:31691670-31691169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
510
               

               
Alignm identity:
               
383
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
163, 79
               

               
Conread position:
               
114-632
               

               
Cow position:
               
chr21:7673308-7672797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
526
               

               
Alignm identity:
               
380
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 84
               

               
Conread position:
               
115-445
               

               
Cow position:
               
chr21:42007275-42007603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
34, 47
               

               
Conread position:
               
115-497
               

               
Cow position:
               
chr21:42135429-42135819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 18
               

               
Conread position:
               
115-505
               

               
Cow position:
               
chr21:18779789-18780173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
182, 102
               

               
Conread position:
               
115-609
               

               
Cow position:
               
chr21:42384696-42384199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 149
               

               
Conread position:
               
115-612
               

               
Cow position:
               
chr21:28924297-28923831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 158
               

               
Conread position:
               
116-493
               

               
Cow position:
               
chr21:5427122-5426755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
197, 17
               

               
Conread position:
               
117-474
               

               
Cow position:
               
chr21:21169311-21169667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 91
               

               
Conread position:
               
117-492
               

               
Cow position:
               
chr21:13365526-13365151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
159, 17
               

               
Conread position:
               
118-376
               

               
Cow position:
               
chr21:16570083-16569825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
175, 28
               

               
Conread position:
               
118-482
               

               
Cow position:
               
chr21:17184100-17183741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
195, 15
               

               
Conread position:
               
118-609
               

               
Cow position:
               
chr21:724708-725199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
380
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
194, 27
               

               
Conread position:
               
119-239
               

               
Cow position:
               
chr21:25012263-25012145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
119-273
               

               
Cow position:
               
chr21:46451772-46451923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
119-417
               

               
Cow position:
               
chr21:2657991-2657704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
24, 14
               

               
Conread position:
               
119-428
               

               
Cow position:
               
chr21:47222-46912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
25, 14
               

               
Conread position:
               
119-443
               

               
Cow position:
               
chr21:29978578-29978903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
261, 13
               

               
Conread position:
               
119-499
               

               
Cow position:
               
chr21:32339558-32339932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
195, 14
               

               
Conread position:
               
119-506
               

               
Cow position:
               
chr21:1059258-1058873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
159, 101
               

               
Conread position:
               
119-506
               

               
Cow position:
               
chr21:6051685-6051302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
158, 13
               

               
Conread position:
               
119-561
               

               
Cow position:
               
chr21:44251661-44252089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 14
               

               
Conread position:
               
119-579
               

               
Cow position:
               
chr21:33563185-33562735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
236, 14
               

               
Conread position:
               
119-610
               

               
Cow position:
               
chr21:24858497-24858001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
386
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 13
               

               
Conread position:
               
119-612
               

               
Cow position:
               
chr21:26245096-26244633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
194, 14
               

               
Conread position:
               
119-612
               

               
Cow position:
               
chr21:38900956-38900469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
501
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
196, 60
               

               
Conread position:
               
119-612
               

               
Cow position:
               
chr21:41579938-41579428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 14
               

               
Conread position:
               
119-621
               

               
Cow position:
               
chr21:5153802-5153294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
526
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 35
               

               
Conread position:
               
119-623
               

               
Cow position:
               
chr21:9416431-9415917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
385
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 14
               

               
Conread position:
               
119-630
               

               
Cow position:
               
chr21:20160858-20160351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
523
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
194, 14
               

               
Conread position:
               
119-643
               

               
Cow position:
               
chr21:396049-395529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
540
               

               
Alignm identity:
               
383
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 14
               

               
Conread position:
               
120-439
               

               
Cow position:
               
chr21:20153135-20152810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
193, 24
               

               
Conread position:
               
120-458
               

               
Cow position:
               
chr21:45920877-45921215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
120, 21
               

               
Conread position:
               
120-489
               

               
Cow position:
               
chr21:15611320-15610967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
153, 17
               

               
Conread position:
               
120-506
               

               
Cow position:
               
chr21:22861180-22860798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 14
               

               
Conread position:
               
120-518
               

               
Cow position:
               
chr21:31662648-31662244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 14
               

               
Conread position:
               
120-526
               

               
Cow position:
               
chr21:28626418-28626017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 14
               

               
Conread position:
               
120-589
               

               
Cow position:
               
chr21:36297675-36297190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
150, 365
               

               
Conread position:
               
120-610
               

               
Cow position:
               
chr21:11644784-11645295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
384
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
144, 258
               

               
Conread position:
               
120-610
               

               
Cow position:
               
chr21:33210370-33209889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
375
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
193, 135
               

               
Conread position:
               
120-625
               

               
Cow position:
               
chr21:33982628-33983133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
384
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
179, 78
               

               
Conread position:
               
121-399
               

               
Cow position:
               
chr21:45262629-45262911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
151, 0
               

               
Conread position:
               
122-241
               

               
Cow position:
               
chr21:8506366-8506485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
122-241
               

               
Cow position:
               
chr21:8509254-8509373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
122-268
               

               
Cow position:
               
chr21:22851100-22850956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
122-273
               

               
Cow position:
               
chr21:16498696-16498549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
118, 83
               

               
Conread position:
               
122-312
               

               
Cow position:
               
chr21:7169868-7169677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
118, 139
               

               
Conread position:
               
122-348
               

               
Cow position:
               
chr21:41522235-41522455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
182, 76
               

               
Conread position:
               
122-361
               

               
Cow position:
               
chr21:8349508-8349267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
153, 76
               

               
Conread position:
               
122-386
               

               
Cow position:
               
chr21:6998127-6997850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
107, 117
               

               
Conread position:
               
122-442
               

               
Cow position:
               
chr21:48233985-48234299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
33, 74
               

               
Conread position:
               
122-470
               

               
Cow position:
               
chr21:10001255-10000912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
193, 120
               

               
Conread position:
               
122-483
               

               
Cow position:
               
chr21:802137-802475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
258, 119
               

               
Conread position:
               
122-486
               

               
Cow position:
               
chr21:28191212-28190844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 87
               

               
Conread position:
               
122-490
               

               
Cow position:
               
chr21:40589302-40589671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 40
               

               
Conread position:
               
122-505
               

               
Cow position:
               
chr21:24598837-24598456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 15
               

               
Conread position:
               
122-512
               

               
Cow position:
               
chr21:3818388-3818005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
191, 35
               

               
Conread position:
               
122-570
               

               
Cow position:
               
chr21:6713343-6713809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 77
               

               
Conread position:
               
122-608
               

               
Cow position:
               
chr21:34654253-34653778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 106
               

               
Conread position:
               
122-625
               

               
Cow position:
               
chr21:4399983-4399472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
520
               

               
Alignm identity:
               
374
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 40
               

               
Conread position:
               
123-428
               

               
Cow position:
               
chr21:12301332-12301630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
26, 39
               

               
Conread position:
               
123-440
               

               
Cow position:
               
chr21:12461787-12462109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 29
               

               
Conread position:
               
123-506
               

               
Cow position:
               
chr21:40134334-40133951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 11
               

               
Conread position:
               
124-313
               

               
Cow position:
               
chr21:21615960-21615765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
148, 0
               

               
Conread position:
               
124-419
               

               
Cow position:
               
chr21:46551924-46552217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
25, 50
               

               
Conread position:
               
124-457
               

               
Cow position:
               
chr21:10633463-10633796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
142, 28
               

               
Conread position:
               
124-505
               

               
Cow position:
               
chr21:45356011-45355633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
156, 117
               

               
Conread position:
               
124-559
               

               
Cow position:
               
chr21:39403347-39403797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 360
               

               
Conread position:
               
124-591
               

               
Cow position:
               
chr21:9940012-9940469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
116, 30
               

               
Conread position:
               
124-610
               

               
Cow position:
               
chr21:19195988-19196479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 10
               

               
Conread position:
               
124-630
               

               
Cow position:
               
chr21:41974200-41974709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
379
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 26
               

               
Conread position:
               
125-312
               

               
Cow position:
               
chr21:41046983-41046796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
148, 84
               

               
Conread position:
               
125-337
               

               
Cow position:
               
chr21:674866-674655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
11, 145
               

               
Conread position:
               
125-491
               

               
Cow position:
               
chr21:47763941-47764301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 39
               

               
Conread position:
               
125-567
               

               
Cow position:
               
chr21:36795780-36795333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 227
               

               
Conread position:
               
125-591
               

               
Cow position:
               
chr21:28733736-28734203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
188, 90
               

               
Conread position:
               
125-598
               

               
Cow position:
               
chr21:33997053-33997523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
188, 11
               

               
Conread position:
               
125-630
               

               
Cow position:
               
chr21:28989790-28989286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 60
               

               
Conread position:
               
125-633
               

               
Cow position:
               
chr21:5898225-5898727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
516
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
183, 90
               

               
Conread position:
               
126-239
               

               
Cow position:
               
chr21:15012615-15012502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
114
               

               
Alignm identity:
               
89
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
126-605
               

               
Cow position:
               
chr21:36763237-36762744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
111, 118
               

               
Conread position:
               
127-386
               

               
Cow position:
               
chr21:31090260-31090508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
47, 83
               

               
Conread position:
               
127-610
               

               
Cow position:
               
chr21:38121276-38120793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
380
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
186, 251
               

               
Conread position:
               
128-354
               

               
Cow position:
               
chr21:22014364-22014133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
112, 116
               

               
Conread position:
               
128-363
               

               
Cow position:
               
chr21:297928-297689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
145, 155
               

               
Conread position:
               
128-369
               

               
Cow position:
               
chr21:44214300-44214055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 74
               

               
Conread position:
               
128-484
               

               
Cow position:
               
chr21:15911574-15911218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 69
               

               
Conread position:
               
128-506
               

               
Cow position:
               
chr21:47215021-47215385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
8, 16
               

               
Conread position:
               
128-512
               

               
Cow position:
               
chr21:13584887-13585271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
99, 202
               

               
Conread position:
               
131-343
               

               
Cow position:
               
chr21:742448-742245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
194, 71
               

               
Conread position:
               
131-605
               

               
Cow position:
               
chr21:48176990-48176524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
150, 6
               

               
Conread position:
               
131-607
               

               
Cow position:
               
chr21:46264341-46263870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
183, 97
               

               
Conread position:
               
132-268
               

               
Cow position:
               
chr21:6851342-6851206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
132-446
               

               
Cow position:
               
chr21:35354703-35354393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
37, 111
               

               
Conread position:
               
133-333
               

               
Cow position:
               
chr21:734758-734563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
164, 51
               

               
Conread position:
               
133-384
               

               
Cow position:
               
chr21:47363565-47363821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
85, 132
               

               
Conread position:
               
133-438
               

               
Cow position:
               
chr21:12723320-12723020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 65
               

               
Conread position:
               
133-455
               

               
Cow position:
               
chr21:20260150-20260474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 15
               

               
Conread position:
               
133-463
               

               
Cow position:
               
chr21:18064749-18065085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
107, 34
               

               
Conread position:
               
133-480
               

               
Cow position:
               
chr21:8235393-8235722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
17, 29
               

               
Conread position:
               
133-623
               

               
Cow position:
               
chr21:25383195-25382672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
526
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 260
               

               
Conread position:
               
134-324
               

               
Cow position:
               
chr21:47160386-47160199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
106, 110
               

               
Conread position:
               
134-493
               

               
Cow position:
               
chr21:32559197-32559545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
176, 115
               

               
Conread position:
               
134-505
               

               
Cow position:
               
chr21:12801579-12801947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 114
               

               
Conread position:
               
134-591
               

               
Cow position:
               
chr21:2679716-2679268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
134, 12
               

               
Conread position:
               
134-610
               

               
Cow position:
               
chr21:23672913-23672440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 74
               

               
Conread position:
               
134-612
               

               
Cow position:
               
chr21:8125637-8126098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 74
               

               
Conread position:
               
135-405
               

               
Cow position:
               
chr21:10561414-10561687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
18, 10
               

               
Conread position:
               
137-621
               

               
Cow position:
               
chr21:5392370-5392862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
370
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 231
               

               
Conread position:
               
138-396
               

               
Cow position:
               
chr21:37789836-37790100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
99, 13
               

               
Conread position:
               
138-477
               

               
Cow position:
               
chr21:41198236-41198586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
96, 13
               

               
Conread position:
               
138-489
               

               
Cow position:
               
chr21:28027959-28027616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
162, 13
               

               
Conread position:
               
139-344
               

               
Cow position:
               
chr21:19059931-19060131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
175, 12
               

               
Conread position:
               
139-524
               

               
Cow position:
               
chr21:10007477-10007863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
82, 12
               

               
Conread position:
               
139-581
               

               
Cow position:
               
chr21:25127766-25127329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
138, 12
               

               
Conread position:
               
140-311
               

               
Cow position:
               
chr21:20183233-20183064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
124, 0
               

               
Conread position:
               
141-409
               

               
Cow position:
               
chr21:19407415-19407697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
83, 11
               

               
Conread position:
               
141-437
               

               
Cow position:
               
chr21:20418521-20418825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
172, 0
               

               
Conread position:
               
141-612
               

               
Cow position:
               
chr21:47760928-47760465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
240, 10
               

               
Conread position:
               
141-621
               

               
Cow position:
               
chr21:33729590-33729111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 10
               

               
Conread position:
               
141-627
               

               
Cow position:
               
chr21:22856378-22855896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
172, 10
               

               
Conread position:
               
142-392
               

               
Cow position:
               
chr21:9036460-9036204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
90, 9
               

               
Conread position:
               
145-624
               

               
Cow position:
               
chr21:19363303-19363777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
366
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 16
               

               
Conread position:
               
146-508
               

               
Cow position:
               
chr21:18844856-18845221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 301
               

               
Conread position:
               
149-301
               

               
Cow position:
               
chr21:12104519-12104367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
57, 118
               

               
Conread position:
               
151-627
               

               
Cow position:
               
chr21:7564156-7564648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 117
               

               
Conread position:
               
151-630
               

               
Cow position:
               
chr21:16187656-16188137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
162, 156
               

               
Conread position:
               
151-631
               

               
Cow position:
               
chr21:39664247-39664705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
86, 93
               

               
Conread position:
               
156-424
               

               
Cow position:
               
chr21:36789941-36789671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
84, 88
               

               
Conread position:
               
157-496
               

               
Cow position:
               
chr21:1591699-1591357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
156, 268
               

               
Conread position:
               
157-505
               

               
Cow position:
               
chr21:30606941-30607288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 194
               

               
Conread position:
               
158-621
               

               
Cow position:
               
chr21:42540078-42540544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
222, 144
               

               
Conread position:
               
160-496
               

               
Cow position:
               
chr21:42841455-42841785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 88
               

               
Conread position:
               
160-501
               

               
Cow position:
               
chr21:18842095-18842437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 123
               

               
Conread position:
               
160-537
               

               
Cow position:
               
chr21:41878611-41878241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 16
               

               
Conread position:
               
160-611
               

               
Cow position:
               
chr21:34390833-34391277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
153, 110
               

               
Conread position:
               
163-512
               

               
Cow position:
               
chr21:13738692-13738362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
245, 45
               

               
Conread position:
               
163-512
               

               
Cow position:
               
chr21:18940441-18940766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
129, 29
               

               
Conread position:
               
163-612
               

               
Cow position:
               
chr21:4998356-4998797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 60
               

               
Conread position:
               
163-623
               

               
Cow position:
               
chr21:30231555-30232025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
183, 130
               

               
Conread position:
               
163-624
               

               
Cow position:
               
chr21:44515403-44514944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
150, 103
               

               
Conread position:
               
164-306
               

               
Cow position:
               
chr21:46599499-46599357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
164-354
               

               
Cow position:
               
chr21:13656498-13656682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
73, 83
               

               
Conread position:
               
164-605
               

               
Cow position:
               
chr21:15584281-15584704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
149, 100
               

               
Conread position:
               
168-342
               

               
Cow position:
               
chr21:45835267-45835444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
46, 94
               

               
Conread position:
               
168-609
               

               
Cow position:
               
chr21:24131203-24130777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 77
               

               
Conread position:
               
168-613
               

               
Cow position:
               
chr21:45915584-45916017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 40
               

               
Conread position:
               
169-627
               

               
Cow position:
               
chr21:46912678-46912216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 69
               

               
Conread position:
               
170-485
               

               
Cow position:
               
chr21:46144091-46143760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
88, 71
               

               
Conread position:
               
172-421
               

               
Cow position:
               
chr21:18155436-18155693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
65, 72
               

               
Conread position:
               
172-447
               

               
Cow position:
               
chr21:44962927-44962649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
49, 74
               

               
Conread position:
               
172-459
               

               
Cow position:
               
chr21:11027225-11027514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
65, 72
               

               
Conread position:
               
172-460
               

               
Cow position:
               
chr21:13840456-13840164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
65, 10
               

               
Conread position:
               
172-484
               

               
Cow position:
               
chr21:13488657-13488337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
172-610
               

               
Cow position:
               
chr21:18289793-18289353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 72
               

               
Conread position:
               
174-473
               

               
Cow position:
               
chr21:32455032-32454729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
54, 41
               

               
Conread position:
               
176-437
               

               
Cow position:
               
chr21:17856670-17856408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
137, 168
               

               
Conread position:
               
184-612
               

               
Cow position:
               
chr21:20262217-20262646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 57
               

               
Conread position:
               
186-643
               

               
Cow position:
               
chr21:426923-426445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 302
               

               
Conread position:
               
192-439
               

               
Cow position:
               
chr21:44733063-44733299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
186, 89
               

               
Conread position:
               
200-447
               

               
Cow position:
               
chr21:18041745-18041988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
110, 82
               
Show alignments to all cow chromosomes.