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Cow genome map

           
Conread name:
           
Lym2-sn37_F04.f
        

               
Conread position:
               
55-376
               

               
Cow position:
               
chr27:20656841-20656538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
295, 20
               

               
Conread position:
               
99-340
               

               
Cow position:
               
chr27:20812723-20812965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
21, 14
               

               
Conread position:
               
102-319
               

               
Cow position:
               
chr27:20517483-20517694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
11, 32
               

               
Conread position:
               
106-610
               

               
Cow position:
               
chr27:4672836-4673345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
408
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 146
               

               
Conread position:
               
108-487
               

               
Cow position:
               
chr27:19685886-19685509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
207, 12
               

               
Conread position:
               
110-536
               

               
Cow position:
               
chr27:20068145-20067733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
203, 10
               

               
Conread position:
               
110-610
               

               
Cow position:
               
chr27:22171128-22171629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
375
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
158, 88
               

               
Conread position:
               
111-609
               

               
Cow position:
               
chr27:299549-299054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
370
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
184, 9
               

               
Conread position:
               
111-623
               

               
Cow position:
               
chr27:22418938-22418421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
528
               

               
Alignm identity:
               
380
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 111
               

               
Conread position:
               
112-236
               

               
Cow position:
               
chr27:11133917-11134040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
112-239
               

               
Cow position:
               
chr27:19576493-19576366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
112-245
               

               
Cow position:
               
chr27:15859464-15859335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
112-273
               

               
Cow position:
               
chr27:6319748-6319911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
112-326
               

               
Cow position:
               
chr27:23560202-23559988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
8, 153
               

               
Conread position:
               
112-340
               

               
Cow position:
               
chr27:17646338-17646113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
154, 0
               

               
Conread position:
               
112-393
               

               
Cow position:
               
chr27:30261062-30260780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
92, 110
               

               
Conread position:
               
112-407
               

               
Cow position:
               
chr27:8168600-8168300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
37, 47
               

               
Conread position:
               
112-437
               

               
Cow position:
               
chr27:23890766-23891093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 156
               

               
Conread position:
               
112-441
               

               
Cow position:
               
chr27:16780700-16781024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 25
               

               
Conread position:
               
112-444
               

               
Cow position:
               
chr27:30872226-30871897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
31, 59
               

               
Conread position:
               
112-505
               

               
Cow position:
               
chr27:30764866-30765255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 41
               

               
Conread position:
               
112-516
               

               
Cow position:
               
chr27:26643520-26643907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
112-540
               

               
Cow position:
               
chr27:30407204-30406773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 8
               

               
Conread position:
               
112-549
               

               
Cow position:
               
chr27:10979693-10980133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 36
               

               
Conread position:
               
112-610
               

               
Cow position:
               
chr27:24227969-24227463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
370
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 41
               

               
Conread position:
               
112-610
               

               
Cow position:
               
chr27:26959785-26959294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 132
               

               
Conread position:
               
112-612
               

               
Cow position:
               
chr27:17397624-17397122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
393
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 21
               

               
Conread position:
               
112-612
               

               
Cow position:
               
chr27:27020267-27019771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 22
               

               
Conread position:
               
112-624
               

               
Cow position:
               
chr27:1768795-1768287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
530
               

               
Alignm identity:
               
388
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 114
               

               
Conread position:
               
112-638
               

               
Cow position:
               
chr27:23452292-23452830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
551
               

               
Alignm identity:
               
386
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
202, 101
               

               
Conread position:
               
113-239
               

               
Cow position:
               
chr27:26323280-26323405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
7, 20
               

               
Conread position:
               
113-259
               

               
Cow position:
               
chr27:788965-788820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
7, 21
               

               
Conread position:
               
113-266
               

               
Cow position:
               
chr27:15003145-15002994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
113-268
               

               
Cow position:
               
chr27:30489579-30489424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
7, 20
               

               
Conread position:
               
113-296
               

               
Cow position:
               
chr27:19508844-19509027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
113-306
               

               
Cow position:
               
chr27:29597914-29597727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
163, 18
               

               
Conread position:
               
113-312
               

               
Cow position:
               
chr27:23108070-23107873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
19, 104
               

               
Conread position:
               
113-343
               

               
Cow position:
               
chr27:16088638-16088872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
115, 21
               

               
Conread position:
               
113-355
               

               
Cow position:
               
chr27:15215060-15215308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
38, 131
               

               
Conread position:
               
113-365
               

               
Cow position:
               
chr27:27694937-27694686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
7, 20
               

               
Conread position:
               
113-376
               

               
Cow position:
               
chr27:23594153-23594412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
7, 20
               

               
Conread position:
               
113-386
               

               
Cow position:
               
chr27:26226458-26226182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
7, 21
               

               
Conread position:
               
113-405
               

               
Cow position:
               
chr27:16103643-16103931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 53
               

               
Conread position:
               
113-424
               

               
Cow position:
               
chr27:16589871-16589570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
200, 150
               

               
Conread position:
               
113-426
               

               
Cow position:
               
chr27:426800-427117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 93
               

               
Conread position:
               
113-493
               

               
Cow position:
               
chr27:30359238-30359606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
189, 157
               

               
Conread position:
               
113-495
               

               
Cow position:
               
chr27:26238858-26239237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
200, 19
               

               
Conread position:
               
113-505
               

               
Cow position:
               
chr27:12596606-12596980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
7, 53
               

               
Conread position:
               
113-540
               

               
Cow position:
               
chr27:2957243-2957662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 21
               

               
Conread position:
               
113-556
               

               
Cow position:
               
chr27:23483057-23483498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 86
               

               
Conread position:
               
113-608
               

               
Cow position:
               
chr27:22035545-22035049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
501
               

               
Alignm identity:
               
378
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 7
               

               
Conread position:
               
113-609
               

               
Cow position:
               
chr27:31219096-31219564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
200, 94
               

               
Conread position:
               
113-610
               

               
Cow position:
               
chr27:14670548-14670051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
390
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
197, 16
               

               
Conread position:
               
113-610
               

               
Cow position:
               
chr27:22603017-22603492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
134, 91
               

               
Conread position:
               
113-612
               

               
Cow position:
               
chr27:13411536-13411029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 20
               

               
Conread position:
               
113-612
               

               
Cow position:
               
chr27:27460738-27460258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
507
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 19
               

               
Conread position:
               
113-625
               

               
Cow position:
               
chr27:24446314-24445808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
522
               

               
Alignm identity:
               
382
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
200, 7
               

               
Conread position:
               
113-627
               

               
Cow position:
               
chr27:8942856-8942346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
528
               

               
Alignm identity:
               
366
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 18
               

               
Conread position:
               
113-636
               

               
Cow position:
               
chr27:19387849-19388371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
534
               

               
Alignm identity:
               
405
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 93
               

               
Conread position:
               
114-362
               

               
Cow position:
               
chr27:15378641-15378396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
159, 23
               

               
Conread position:
               
114-522
               

               
Cow position:
               
chr27:22220385-22220794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 242
               

               
Conread position:
               
115-229
               

               
Cow position:
               
chr27:4398657-4398544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
115
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
115-325
               

               
Cow position:
               
chr27:23485046-23485258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
124, 28
               

               
Conread position:
               
115-610
               

               
Cow position:
               
chr27:20641501-20641013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 34
               

               
Conread position:
               
116-610
               

               
Cow position:
               
chr27:10307463-10306946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
528
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 31
               

               
Conread position:
               
116-610
               

               
Cow position:
               
chr27:11435486-11435001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 28
               

               
Conread position:
               
118-592
               

               
Cow position:
               
chr27:29831864-29831376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 142
               

               
Conread position:
               
118-610
               

               
Cow position:
               
chr27:26433970-26433484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
501
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
175, 29
               

               
Conread position:
               
119-348
               

               
Cow position:
               
chr27:590925-590699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
153, 140
               

               
Conread position:
               
119-445
               

               
Cow position:
               
chr27:4944677-4944365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
159, 0
               

               
Conread position:
               
119-474
               

               
Cow position:
               
chr27:16705089-16705439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
146, 14
               

               
Conread position:
               
119-486
               

               
Cow position:
               
chr27:19546674-19546300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
157, 74
               

               
Conread position:
               
119-533
               

               
Cow position:
               
chr27:23929805-23930215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 50
               

               
Conread position:
               
119-540
               

               
Cow position:
               
chr27:6550302-6550709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
195, 14
               

               
Conread position:
               
119-573
               

               
Cow position:
               
chr27:26413416-26412965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
193, 14
               

               
Conread position:
               
119-610
               

               
Cow position:
               
chr27:19717753-19718249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
507
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 14
               

               
Conread position:
               
119-612
               

               
Cow position:
               
chr27:21393670-21393175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 39
               

               
Conread position:
               
120-268
               

               
Cow position:
               
chr27:6106542-6106684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
120-374
               

               
Cow position:
               
chr27:29504809-29504553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
156, 17
               

               
Conread position:
               
120-598
               

               
Cow position:
               
chr27:27136681-27136217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 23
               

               
Conread position:
               
120-610
               

               
Cow position:
               
chr27:6073770-6074246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
373
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
192, 77
               

               
Conread position:
               
120-611
               

               
Cow position:
               
chr27:15867229-15867718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
507
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 35
               

               
Conread position:
               
121-609
               

               
Cow position:
               
chr27:8353318-8353793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
199, 74
               

               
Conread position:
               
121-609
               

               
Cow position:
               
chr27:25809675-25809194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
175, 16
               

               
Conread position:
               
121-610
               

               
Cow position:
               
chr27:1353423-1353925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 12
               

               
Conread position:
               
121-610
               

               
Cow position:
               
chr27:8630031-8629544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
192, 77
               

               
Conread position:
               
121-636
               

               
Cow position:
               
chr27:4819874-4819358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
534
               

               
Alignm identity:
               
369
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 59
               

               
Conread position:
               
122-233
               

               
Cow position:
               
chr27:6496599-6496707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
112
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
122-238
               

               
Cow position:
               
chr27:13204300-13204415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
117
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
122-296
               

               
Cow position:
               
chr27:28478420-28478594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
122-297
               

               
Cow position:
               
chr27:22348330-22348500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
141, 0
               

               
Conread position:
               
122-304
               

               
Cow position:
               
chr27:20897181-20897003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
122-377
               

               
Cow position:
               
chr27:22559983-22559724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
150, 87
               

               
Conread position:
               
122-431
               

               
Cow position:
               
chr27:7649740-7649433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
42, 19
               

               
Conread position:
               
122-463
               

               
Cow position:
               
chr27:29431309-29431637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
191, 86
               

               
Conread position:
               
122-543
               

               
Cow position:
               
chr27:7412233-7412644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 95
               

               
Conread position:
               
122-570
               

               
Cow position:
               
chr27:23882527-23882075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 61
               

               
Conread position:
               
122-605
               

               
Cow position:
               
chr27:4386221-4385743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 126
               

               
Conread position:
               
122-621
               

               
Cow position:
               
chr27:15454051-15454555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
386
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
149, 79
               

               
Conread position:
               
122-633
               

               
Cow position:
               
chr27:27038997-27038481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
528
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 86
               

               
Conread position:
               
122-634
               

               
Cow position:
               
chr27:8062507-8062012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
520
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 24
               

               
Conread position:
               
123-232
               

               
Cow position:
               
chr27:9697494-9697603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
110
               

               
Alignm identity:
               
87
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
123-324
               

               
Cow position:
               
chr27:18767219-18767020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
194, 26
               

               
Conread position:
               
123-375
               

               
Cow position:
               
chr27:8263495-8263239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
24, 38
               

               
Conread position:
               
123-442
               

               
Cow position:
               
chr27:27270701-27270377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
20, 36
               

               
Conread position:
               
123-610
               

               
Cow position:
               
chr27:26999580-26999095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 21
               

               
Conread position:
               
123-611
               

               
Cow position:
               
chr27:12246495-12246976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 86
               

               
Conread position:
               
124-340
               

               
Cow position:
               
chr27:8405978-8405765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
190, 23
               

               
Conread position:
               
124-428
               

               
Cow position:
               
chr27:29312832-29312523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
190, 232
               

               
Conread position:
               
124-488
               

               
Cow position:
               
chr27:19648100-19647738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
145, 103
               

               
Conread position:
               
124-524
               

               
Cow position:
               
chr27:29039099-29038699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
44, 23
               

               
Conread position:
               
124-540
               

               
Cow position:
               
chr27:26920068-26919655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
137, 28
               

               
Conread position:
               
124-567
               

               
Cow position:
               
chr27:28931957-28931502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 13
               

               
Conread position:
               
124-610
               

               
Cow position:
               
chr27:10582217-10582693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 10
               

               
Conread position:
               
124-612
               

               
Cow position:
               
chr27:15925188-15925667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
184, 97
               

               
Conread position:
               
125-295
               

               
Cow position:
               
chr27:31210392-31210559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
125-323
               

               
Cow position:
               
chr27:17918470-17918276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
115, 122
               

               
Conread position:
               
125-408
               

               
Cow position:
               
chr27:31148605-31148892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
188, 18
               

               
Conread position:
               
125-441
               

               
Cow position:
               
chr27:11480793-11480470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
110, 273
               

               
Conread position:
               
125-539
               

               
Cow position:
               
chr27:18507493-18507889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 34
               

               
Conread position:
               
125-610
               

               
Cow position:
               
chr27:7212870-7212392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
255, 213
               

               
Conread position:
               
125-611
               

               
Cow position:
               
chr27:26807721-26807235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
128, 27
               

               
Conread position:
               
125-625
               

               
Cow position:
               
chr27:20828866-20828361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
510
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
187, 21
               

               
Conread position:
               
126-266
               

               
Cow position:
               
chr27:7343584-7343444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
44, 20
               

               
Conread position:
               
126-309
               

               
Cow position:
               
chr27:22422007-22421824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
113, 122
               

               
Conread position:
               
126-453
               

               
Cow position:
               
chr27:15409192-15408872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
252, 194
               

               
Conread position:
               
126-472
               

               
Cow position:
               
chr27:20037270-20036938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
146, 30
               

               
Conread position:
               
126-509
               

               
Cow position:
               
chr27:4835763-4835379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 182
               

               
Conread position:
               
126-512
               

               
Cow position:
               
chr27:4390413-4390023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
103, 20
               

               
Conread position:
               
126-567
               

               
Cow position:
               
chr27:26581592-26581159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 111
               

               
Conread position:
               
126-686
               

               
Cow position:
               
chr27:25721105-25720538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
573
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
92, 65
               

               
Conread position:
               
128-380
               

               
Cow position:
               
chr27:20092988-20092739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
134, 158
               

               
Conread position:
               
128-406
               

               
Cow position:
               
chr27:22569631-22569898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
128-518
               

               
Cow position:
               
chr27:30890141-30890522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 13
               

               
Conread position:
               
128-522
               

               
Cow position:
               
chr27:16284322-16284713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 18
               

               
Conread position:
               
128-587
               

               
Cow position:
               
chr27:20283484-20283930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 9
               

               
Conread position:
               
130-489
               

               
Cow position:
               
chr27:18593121-18593475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
185, 78
               

               
Conread position:
               
131-379
               

               
Cow position:
               
chr27:20497055-20497313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
78, 117
               

               
Conread position:
               
131-491
               

               
Cow position:
               
chr27:16478487-16478139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
133, 67
               

               
Conread position:
               
131-610
               

               
Cow position:
               
chr27:1122881-1123347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
184, 78
               

               
Conread position:
               
132-501
               

               
Cow position:
               
chr27:30354494-30354126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
183, 142
               

               
Conread position:
               
132-518
               

               
Cow position:
               
chr27:27389173-27388792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 130
               

               
Conread position:
               
133-472
               

               
Cow position:
               
chr27:26150869-26151210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 248
               

               
Conread position:
               
133-505
               

               
Cow position:
               
chr27:19660783-19661166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
107, 299
               

               
Conread position:
               
133-554
               

               
Cow position:
               
chr27:19589324-19589749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 108
               

               
Conread position:
               
133-610
               

               
Cow position:
               
chr27:10992208-10992697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 87
               

               
Conread position:
               
133-610
               

               
Cow position:
               
chr27:20628920-20629358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
363, 108
               

               
Conread position:
               
133-610
               

               
Cow position:
               
chr27:23632451-23632926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
158, 84
               

               
Conread position:
               
134-345
               

               
Cow position:
               
chr27:26407307-26407100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
106, 59
               

               
Conread position:
               
134-497
               

               
Cow position:
               
chr27:20553584-20553932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
134-552
               

               
Cow position:
               
chr27:21669265-21668853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
410, 137
               

               
Conread position:
               
135-327
               

               
Cow position:
               
chr27:12710101-12710284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
54, 23
               

               
Conread position:
               
136-623
               

               
Cow position:
               
chr27:25783480-25783930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
193, 57
               

               
Conread position:
               
137-374
               

               
Cow position:
               
chr27:23510838-23511084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
32, 56
               

               
Conread position:
               
137-431
               

               
Cow position:
               
chr27:7731402-7731099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
124, 263
               

               
Conread position:
               
137-453
               

               
Cow position:
               
chr27:28496515-28496203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
197, 50
               

               
Conread position:
               
137-532
               

               
Cow position:
               
chr27:24014884-24014491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 146
               

               
Conread position:
               
137-612
               

               
Cow position:
               
chr27:31231225-31230763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
410, 20
               

               
Conread position:
               
138-489
               

               
Cow position:
               
chr27:1498171-1498521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 67
               

               
Conread position:
               
138-518
               

               
Cow position:
               
chr27:6499918-6500301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 13
               

               
Conread position:
               
138-547
               

               
Cow position:
               
chr27:27844146-27843727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 130
               

               
Conread position:
               
141-436
               

               
Cow position:
               
chr27:22513817-22513520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
82, 10
               

               
Conread position:
               
141-436
               

               
Cow position:
               
chr27:22735731-22735447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
209, 11
               

               
Conread position:
               
141-610
               

               
Cow position:
               
chr27:15871021-15871492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 10
               

               
Conread position:
               
154-392
               

               
Cow position:
               
chr27:16625772-16626011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
159, 53
               

               
Conread position:
               
158-524
               

               
Cow position:
               
chr27:4813007-4812632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 319
               

               
Conread position:
               
158-609
               

               
Cow position:
               
chr27:4806025-4805581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
267, 58
               

               
Conread position:
               
160-607
               

               
Cow position:
               
chr27:30868862-30868413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 113
               

               
Conread position:
               
161-610
               

               
Cow position:
               
chr27:1058798-1058353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 59
               

               
Conread position:
               
163-313
               

               
Cow position:
               
chr27:21130187-21130338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
98, 130
               

               
Conread position:
               
163-474
               

               
Cow position:
               
chr27:18739258-18739580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
74, 81
               

               
Conread position:
               
163-476
               

               
Cow position:
               
chr27:11296151-11296452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
74, 81
               

               
Conread position:
               
163-612
               

               
Cow position:
               
chr27:22426951-22426497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 81
               

               
Conread position:
               
163-637
               

               
Cow position:
               
chr27:23472140-23472602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 34
               

               
Conread position:
               
164-495
               

               
Cow position:
               
chr27:22454893-22454565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
149, 97
               

               
Conread position:
               
164-611
               

               
Cow position:
               
chr27:815244-815696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 93
               

               
Conread position:
               
165-455
               

               
Cow position:
               
chr27:6159863-6160155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
76, 110
               

               
Conread position:
               
168-390
               

               
Cow position:
               
chr27:11151555-11151789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
66, 76
               

               
Conread position:
               
168-431
               

               
Cow position:
               
chr27:28271264-28270997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
147, 95
               

               
Conread position:
               
169-461
               

               
Cow position:
               
chr27:3784-4067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
169-636
               

               
Cow position:
               
chr27:4829924-4829462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 10
               

               
Conread position:
               
170-555
               

               
Cow position:
               
chr27:12429295-12429688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 53
               

               
Conread position:
               
170-630
               

               
Cow position:
               
chr27:9090902-9090449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 39
               

               
Conread position:
               
171-625
               

               
Cow position:
               
chr27:12278363-12277934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
370, 23
               

               
Conread position:
               
172-610
               

               
Cow position:
               
chr27:26428242-26427798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 45
               

               
Conread position:
               
172-612
               

               
Cow position:
               
chr27:435124-435574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 79
               

               
Conread position:
               
174-543
               

               
Cow position:
               
chr27:7851282-7851639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
176, 90
               

               
Conread position:
               
178-481
               

               
Cow position:
               
chr27:18031179-18030860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
45, 299
               

               
Conread position:
               
181-340
               

               
Cow position:
               
chr27:24306728-24306888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
93, 23
               
Show alignments to all cow chromosomes.