Cow genome map

Conread name: Lym2-sn37_F04.f

Conread position: 89-414
Cow position: chr29:27589071-27588743 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 225
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 24, 155

Conread position: 96-625
Cow position: chr29:21196508-21197043 (view UCSC Genome Browser custom track)
Alignm length: 546
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 39

Conread position: 101-443
Cow position: chr29:43251032-43251370 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 228
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 52, 19

Conread position: 102-503
Cow position: chr29:22175813-22175427 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 278
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 211, 18

Conread position: 102-512
Cow position: chr29:25333328-25333728 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 19

Conread position: 102-610
Cow position: chr29:4480038-4480549 (view UCSC Genome Browser custom track)
Alignm length: 521
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 32

Conread position: 111-305
Cow position: chr29:32176797-32176613 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 138
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 26, 0

Conread position: 111-408
Cow position: chr29:22028832-22029115 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 207
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 123, 20

Conread position: 112-261
Cow position: chr29:22723725-22723576 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 116
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 9, 22

Conread position: 112-269
Cow position: chr29:32197822-32197664 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 122
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 9, 0

Conread position: 112-306
Cow position: chr29:38978653-38978462 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 157
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 167, 17

Conread position: 112-326
Cow position: chr29:21666212-21665996 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 160
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 8, 164

Conread position: 112-344
Cow position: chr29:26559124-26559349 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 164
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 201, 8

Conread position: 112-404
Cow position: chr29:23243754-23244051 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 201, 129

Conread position: 112-406
Cow position: chr29:17297260-17296963 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 204
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 8, 47

Conread position: 112-436
Cow position: chr29:25092230-25091910 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 96

Conread position: 112-451
Cow position: chr29:30441061-30440711 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 244
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 9, 32

Conread position: 112-457
Cow position: chr29:28166098-28166438 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 239
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 8, 21

Conread position: 112-503
Cow position: chr29:40298898-40299279 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 280
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 165, 8

Conread position: 112-609
Cow position: chr29:40763570-40764045 (view UCSC Genome Browser custom track)
Alignm length: 508
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 54

Conread position: 112-610
Cow position: chr29:26017378-26017885 (view UCSC Genome Browser custom track)
Alignm length: 520
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 43

Conread position: 112-610
Cow position: chr29:34745535-34746029 (view UCSC Genome Browser custom track)
Alignm length: 508
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 49

Conread position: 112-621
Cow position: chr29:23874584-23874069 (view UCSC Genome Browser custom track)
Alignm length: 526
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 22

Conread position: 112-627
Cow position: chr29:21443214-21443737 (view UCSC Genome Browser custom track)
Alignm length: 530
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 22

Conread position: 113-259
Cow position: chr29:7290899-7290753 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 108
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 113-262
Cow position: chr29:26540419-26540566 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 111
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 16, 0

Conread position: 113-275
Cow position: chr29:683369-683529 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 122
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 7, 20

Conread position: 113-324
Cow position: chr29:22519004-22519215 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 142
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 61, 48

Conread position: 113-404
Cow position: chr29:4085432-4085148 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 199
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 29, 40

Conread position: 113-421
Cow position: chr29:41112758-41113045 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 211
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 127, 103

Conread position: 113-435
Cow position: chr29:26275729-26275415 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 225
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 189, 77

Conread position: 113-442
Cow position: chr29:36210262-36209959 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 234
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 13, 31

Conread position: 113-445
Cow position: chr29:26653922-26654249 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 225
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 32, 20

Conread position: 113-472
Cow position: chr29:6286038-6286393 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 238
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 7, 21

Conread position: 113-473
Cow position: chr29:19949430-19949073 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 85

Conread position: 113-473
Cow position: chr29:34773616-34773964 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 16

Conread position: 113-506
Cow position: chr29:41530972-41530581 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 39

Conread position: 113-529
Cow position: chr29:6844509-6844921 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 21

Conread position: 113-546
Cow position: chr29:7966370-7965945 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 284
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 7, 47

Conread position: 113-556
Cow position: chr29:16657818-16657370 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 21

Conread position: 113-573
Cow position: chr29:9709819-9709361 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 160

Conread position: 113-609
Cow position: chr29:4874757-4875278 (view UCSC Genome Browser custom track)
Alignm length: 523
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 55

Conread position: 113-610
Cow position: chr29:17110080-17109597 (view UCSC Genome Browser custom track)
Alignm length: 506
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 175, 85

Conread position: 113-610
Cow position: chr29:43080496-43080983 (view UCSC Genome Browser custom track)
Alignm length: 506
Alignm identity: 326
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 104, 55

Conread position: 113-611
Cow position: chr29:40097085-40096589 (view UCSC Genome Browser custom track)
Alignm length: 513
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 82

Conread position: 113-612
Cow position: chr29:1325563-1325061 (view UCSC Genome Browser custom track)
Alignm length: 513
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 96

Conread position: 113-629
Cow position: chr29:13639241-13639746 (view UCSC Genome Browser custom track)
Alignm length: 531
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 47

Conread position: 113-629
Cow position: chr29:28775342-28775845 (view UCSC Genome Browser custom track)
Alignm length: 524
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 7

Conread position: 113-635
Cow position: chr29:19125443-19124959 (view UCSC Genome Browser custom track)
Alignm length: 528
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 265, 7

Conread position: 114-351
Cow position: chr29:1615051-1614809 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 165
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 152, 133

Conread position: 114-447
Cow position: chr29:38581100-38580765 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 230
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 126, 19

Conread position: 118-457
Cow position: chr29:463534-463874 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 239
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 35, 45

Conread position: 118-487
Cow position: chr29:25737296-25737667 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 265

Conread position: 118-610
Cow position: chr29:32799594-32800082 (view UCSC Genome Browser custom track)
Alignm length: 507
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 196, 84

Conread position: 118-612
Cow position: chr29:86895-87390 (view UCSC Genome Browser custom track)
Alignm length: 506
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 15

Conread position: 119-298
Cow position: chr29:43441376-43441554 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 131
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 68, 13

Conread position: 119-426
Cow position: chr29:11647210-11646914 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 217
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 47, 14

Conread position: 119-431
Cow position: chr29:11053742-11054048 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 216
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 6, 90

Conread position: 119-454
Cow position: chr29:35677427-35677762 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 233
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 24, 14

Conread position: 119-497
Cow position: chr29:109798-109450 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 267
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 15, 0

Conread position: 119-497
Cow position: chr29:37599104-37599464 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 14

Conread position: 119-500
Cow position: chr29:31929103-31928716 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 13

Conread position: 119-580
Cow position: chr29:40583903-40583452 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 45

Conread position: 119-598
Cow position: chr29:11397809-11398290 (view UCSC Genome Browser custom track)
Alignm length: 497
Alignm identity: 330
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 195, 122

Conread position: 119-610
Cow position: chr29:2744155-2744647 (view UCSC Genome Browser custom track)
Alignm length: 501
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 18

Conread position: 119-612
Cow position: chr29:13028556-13028058 (view UCSC Genome Browser custom track)
Alignm length: 509
Alignm identity: 324
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 121, 14

Conread position: 119-623
Cow position: chr29:22936387-22935896 (view UCSC Genome Browser custom track)
Alignm length: 514
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 14

Conread position: 119-623
Cow position: chr29:39567796-39567297 (view UCSC Genome Browser custom track)
Alignm length: 515
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 195, 16

Conread position: 119-625
Cow position: chr29:40117687-40117180 (view UCSC Genome Browser custom track)
Alignm length: 520
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 190, 13

Conread position: 119-626
Cow position: chr29:28195405-28195914 (view UCSC Genome Browser custom track)
Alignm length: 525
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 196, 14

Conread position: 119-627
Cow position: chr29:16609864-16609346 (view UCSC Genome Browser custom track)
Alignm length: 524
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 14

Conread position: 119-630
Cow position: chr29:10653448-10652943 (view UCSC Genome Browser custom track)
Alignm length: 527
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 14

Conread position: 119-630
Cow position: chr29:29057292-29056786 (view UCSC Genome Browser custom track)
Alignm length: 522
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 40

Conread position: 120-305
Cow position: chr29:44139128-44139312 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 132
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 56, 0

Conread position: 120-377
Cow position: chr29:36220649-36220385 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 180
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 114, 13

Conread position: 120-416
Cow position: chr29:43099630-43099925 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 210
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 192, 32

Conread position: 120-610
Cow position: chr29:36530983-36530489 (view UCSC Genome Browser custom track)
Alignm length: 496
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 184, 158

Conread position: 121-427
Cow position: chr29:5186378-5186689 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 224

Conread position: 122-268
Cow position: chr29:17804648-17804502 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 111
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 142, 59

Conread position: 122-305
Cow position: chr29:38979961-38980137 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 137
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 102, 22

Conread position: 122-313
Cow position: chr29:28840270-28840079 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 146
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 119, 126

Conread position: 122-323
Cow position: chr29:20770458-20770259 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 150
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 118, 76

Conread position: 122-489
Cow position: chr29:1557045-1556680 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 197, 121

Conread position: 122-493
Cow position: chr29:8926347-8926715 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 126

Conread position: 122-493
Cow position: chr29:22613541-22613179 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 30

Conread position: 122-517
Cow position: chr29:42363903-42364294 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 11

Conread position: 122-525
Cow position: chr29:19339115-19338692 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 156

Conread position: 122-561
Cow position: chr29:10058424-10058853 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 26

Conread position: 123-215
Cow position: chr29:17282180-17282089 (view UCSC Genome Browser custom track)
Alignm length: 93
Alignm identity: 81
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 36, 0

Conread position: 123-277
Cow position: chr29:39038156-39038310 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 114
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 123-305
Cow position: chr29:29923461-29923642 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 139
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 147, 86

Conread position: 123-610
Cow position: chr29:18085685-18085200 (view UCSC Genome Browser custom track)
Alignm length: 505
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 382, 191

Conread position: 123-633
Cow position: chr29:9912288-9911761 (view UCSC Genome Browser custom track)
Alignm length: 539
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 38

Conread position: 124-345
Cow position: chr29:5046765-5046542 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 153
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 110, 119

Conread position: 124-494
Cow position: chr29:18021571-18021932 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 247
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 108, 124

Conread position: 124-557
Cow position: chr29:356433-356007 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 114

Conread position: 124-610
Cow position: chr29:7955879-7956340 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 307
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 113, 44

Conread position: 124-610
Cow position: chr29:17607527-17607041 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 254, 9

Conread position: 124-631
Cow position: chr29:11366346-11365860 (view UCSC Genome Browser custom track)
Alignm length: 514
Alignm identity: 339
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 131, 27

Conread position: 124-650
Cow position: chr29:22895839-22895318 (view UCSC Genome Browser custom track)
Alignm length: 543
Alignm identity: 344
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 131, 184

Conread position: 125-296
Cow position: chr29:30681600-30681769 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 120
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 83, 0

Conread position: 125-305
Cow position: chr29:23825099-23825287 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 139
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 115, 119

Conread position: 125-313
Cow position: chr29:23220390-23220576 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 138
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 43, 0

Conread position: 125-340
Cow position: chr29:12625865-12626084 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 154
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 188, 0

Conread position: 125-394
Cow position: chr29:2056172-2055899 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 183
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 115, 119

Conread position: 125-478
Cow position: chr29:27858898-27858550 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 242
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 189, 83

Conread position: 125-486
Cow position: chr29:20903179-20903537 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 181, 109

Conread position: 125-525
Cow position: chr29:40853040-40852645 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 278
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 9, 94

Conread position: 125-590
Cow position: chr29:5892956-5892495 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 170

Conread position: 125-603
Cow position: chr29:38582079-38581601 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 180, 99

Conread position: 125-611
Cow position: chr29:26778993-26778515 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 93

Conread position: 125-612
Cow position: chr29:1022406-1021895 (view UCSC Genome Browser custom track)
Alignm length: 520
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 12

Conread position: 125-621
Cow position: chr29:10839052-10838557 (view UCSC Genome Browser custom track)
Alignm length: 513
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 70

Conread position: 126-345
Cow position: chr29:7624288-7624074 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 164
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 145, 58

Conread position: 126-364
Cow position: chr29:34358868-34359109 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 181
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 146, 134

Conread position: 126-370
Cow position: chr29:4003002-4002761 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 179
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 79, 176

Conread position: 126-493
Cow position: chr29:17222524-17222152 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 256
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 18, 36

Conread position: 126-501
Cow position: chr29:29769241-29769610 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 75

Conread position: 126-504
Cow position: chr29:22068633-22069014 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 264
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 111, 21

Conread position: 127-439
Cow position: chr29:43008975-43009287 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 223
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 186, 124

Conread position: 128-396
Cow position: chr29:17154886-17154608 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 196
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 132, 76

Conread position: 128-554
Cow position: chr29:22162141-22162573 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 257

Conread position: 128-619
Cow position: chr29:23155334-23154844 (view UCSC Genome Browser custom track)
Alignm length: 519
Alignm identity: 356
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 186, 95

Conread position: 129-384
Cow position: chr29:31943975-31943732 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 184
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 46, 137

Conread position: 130-610
Cow position: chr29:26615611-26616111 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 147

Conread position: 131-310
Cow position: chr29:30548881-30548702 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 132
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 131-326
Cow position: chr29:742544-742731 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 148
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 171, 130

Conread position: 131-612
Cow position: chr29:41811485-41811951 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 67

Conread position: 132-236
Cow position: chr29:19363814-19363711 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 86
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 66, 0

Conread position: 132-610
Cow position: chr29:28196905-28197383 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 179, 15

Conread position: 133-392
Cow position: chr29:26416454-26416201 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 183
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 131, 56

Conread position: 133-465
Cow position: chr29:1229710-1229380 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 230
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 16, 27

Conread position: 133-611
Cow position: chr29:4120957-4120477 (view UCSC Genome Browser custom track)
Alignm length: 496
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 20

Conread position: 133-612
Cow position: chr29:45005526-45005993 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 90

Conread position: 133-629
Cow position: chr29:15940523-15941035 (view UCSC Genome Browser custom track)
Alignm length: 514
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 222

Conread position: 134-313
Cow position: chr29:18012660-18012480 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 136
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 135, 0

Conread position: 134-338
Cow position: chr29:24578965-24578755 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 159
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 138, 0

Conread position: 134-374
Cow position: chr29:27329994-27329753 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 184
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 61, 18

Conread position: 134-405
Cow position: chr29:27826622-27826353 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 195
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 244, 56

Conread position: 134-610
Cow position: chr29:32290711-32290227 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 129

Conread position: 134-612
Cow position: chr29:17409437-17408956 (view UCSC Genome Browser custom track)
Alignm length: 493
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 107

Conread position: 134-635
Cow position: chr29:43328746-43328240 (view UCSC Genome Browser custom track)
Alignm length: 511
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 107

Conread position: 135-295
Cow position: chr29:22166977-22167138 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 114
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 148, 0

Conread position: 136-483
Cow position: chr29:10235034-10235361 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 0

Conread position: 137-505
Cow position: chr29:5098667-5099030 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 0

Conread position: 137-505
Cow position: chr29:12680255-12679886 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 176, 127

Conread position: 137-625
Cow position: chr29:35501555-35502034 (view UCSC Genome Browser custom track)
Alignm length: 495
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 109

Conread position: 137-633
Cow position: chr29:28868742-28868231 (view UCSC Genome Browser custom track)
Alignm length: 513
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 166

Conread position: 139-375
Cow position: chr29:24046092-24045850 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 165
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 98, 12

Conread position: 139-474
Cow position: chr29:4520433-4520098 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 69

Conread position: 139-486
Cow position: chr29:23983858-23984213 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 136

Conread position: 141-379
Cow position: chr29:9454964-9455198 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 165
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 99, 11

Conread position: 141-405
Cow position: chr29:25814743-25815004 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 180
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 200, 10

Conread position: 141-510
Cow position: chr29:23844932-23844544 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 273
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 93, 10

Conread position: 141-601
Cow position: chr29:21933027-21933492 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 323
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 172, 10

Conread position: 145-610
Cow position: chr29:17668578-17668130 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 233, 63

Conread position: 151-405
Cow position: chr29:29942642-29942905 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 175
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 86, 93

Conread position: 154-512
Cow position: chr29:40166325-40165967 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 5

Conread position: 157-633
Cow position: chr29:26263915-26263459 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 89

Conread position: 158-408
Cow position: chr29:44682026-44682272 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 184
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 167, 83

Conread position: 158-546
Cow position: chr29:11562691-11562303 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 123

Conread position: 159-507
Cow position: chr29:26672834-26673173 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 89

Conread position: 163-392
Cow position: chr29:31674706-31674471 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 177
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 77, 81

Conread position: 163-472
Cow position: chr29:24103468-24103784 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 46

Conread position: 163-498
Cow position: chr29:26319239-26318933 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 226
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 39, 0

Conread position: 163-505
Cow position: chr29:16195913-16195584 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 52

Conread position: 163-515
Cow position: chr29:14501666-14501316 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 83

Conread position: 163-590
Cow position: chr29:29975111-29974690 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 96

Conread position: 164-379
Cow position: chr29:29314580-29314799 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 167
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 149, 0

Conread position: 164-465
Cow position: chr29:868847-868544 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 103

Conread position: 164-474
Cow position: chr29:24292940-24292638 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 207
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 161, 97

Conread position: 168-506
Cow position: chr29:9139489-9139139 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 240
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 96, 37

Conread position: 169-298
Cow position: chr29:31477046-31477176 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 103
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 49, 92

Conread position: 169-471
Cow position: chr29:44988723-44989018 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 211
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 186, 72

Conread position: 169-610
Cow position: chr29:42771704-42771291 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 289
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 156, 40

Conread position: 169-614
Cow position: chr29:35485313-35484866 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 97

Conread position: 170-360
Cow position: chr29:27846530-27846344 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 135
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 79, 0

Conread position: 170-614
Cow position: chr29:2071505-2071947 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 45

Conread position: 172-436
Cow position: chr29:3100203-3100461 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 200
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 141, 48

Conread position: 172-579
Cow position: chr29:45589524-45589924 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 271
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 133, 220

Conread position: 173-370
Cow position: chr29:29795319-29795523 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 141
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 64, 71

Conread position: 173-480
Cow position: chr29:14615200-14615499 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 216
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 55, 48

Conread position: 185-610
Cow position: chr29:11135845-11136263 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 37

Conread position: 198-491
Cow position: chr29:31594089-31594369 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 184

Show alignments to all cow chromosomes.