Cow genome map

Conread name: Lym2-sn37_F04.f

Conread position: 94-323
Cow position: chr3:55984215-55983988 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 157
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 183, 19

Conread position: 102-373
Cow position: chr3:74243105-74242835 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 200
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 11, 36

Conread position: 102-442
Cow position: chr3:15506562-15506220 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 94

Conread position: 102-582
Cow position: chr3:57760607-57760116 (view UCSC Genome Browser custom track)
Alignm length: 505
Alignm identity: 323
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 11, 31

Conread position: 106-506
Cow position: chr3:3738590-3738200 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 93

Conread position: 108-262
Cow position: chr3:75107880-75107726 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 115
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 112-235
Cow position: chr3:73589667-73589792 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 99
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 8, 0

Conread position: 112-238
Cow position: chr3:19788726-19788854 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 100
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 8, 0

Conread position: 112-273
Cow position: chr3:52845658-52845501 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 120
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 110, 0

Conread position: 112-297
Cow position: chr3:76269993-76269816 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 139
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 8, 21

Conread position: 112-298
Cow position: chr3:3478153-3478338 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 134
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 48, 88

Conread position: 112-301
Cow position: chr3:10591405-10591603 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 147
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 82, 8

Conread position: 112-340
Cow position: chr3:17058446-17058668 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 162
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 37, 8

Conread position: 112-344
Cow position: chr3:15443627-15443861 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 161
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 31, 47

Conread position: 112-357
Cow position: chr3:78093287-78093528 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 188
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 128, 144

Conread position: 112-359
Cow position: chr3:3883715-3883965 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 186
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 164, 8

Conread position: 112-370
Cow position: chr3:15153793-15153535 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 176
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 37, 47

Conread position: 112-381
Cow position: chr3:34871667-34871400 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 173
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 56, 0

Conread position: 112-401
Cow position: chr3:59597278-59596995 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 210
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 164, 8

Conread position: 112-428
Cow position: chr3:70609729-70609409 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 79

Conread position: 112-431
Cow position: chr3:55712542-55712209 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 224
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 128, 132

Conread position: 112-472
Cow position: chr3:3556647-3556287 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 254
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 202, 109

Conread position: 112-474
Cow position: chr3:52608284-52607924 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 269, 194

Conread position: 112-477
Cow position: chr3:75080862-75080504 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 207, 31

Conread position: 112-497
Cow position: chr3:14801846-14801469 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 263
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 32, 41

Conread position: 112-522
Cow position: chr3:59610617-59611023 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 8

Conread position: 112-528
Cow position: chr3:14601602-14602028 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 22

Conread position: 112-540
Cow position: chr3:17934835-17935252 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 159

Conread position: 112-553
Cow position: chr3:210421-209982 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 135

Conread position: 112-584
Cow position: chr3:60597642-60597183 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 8

Conread position: 112-591
Cow position: chr3:10958138-10958603 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 200, 259

Conread position: 112-591
Cow position: chr3:18067234-18066756 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 47

Conread position: 112-595
Cow position: chr3:53222115-53221646 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 148

Conread position: 112-610
Cow position: chr3:7337684-7338174 (view UCSC Genome Browser custom track)
Alignm length: 510
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 266, 8

Conread position: 112-610
Cow position: chr3:30180188-30179687 (view UCSC Genome Browser custom track)
Alignm length: 511
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 35

Conread position: 112-610
Cow position: chr3:75050516-75051026 (view UCSC Genome Browser custom track)
Alignm length: 519
Alignm identity: 339
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 9, 33

Conread position: 112-612
Cow position: chr3:7566316-7566813 (view UCSC Genome Browser custom track)
Alignm length: 508
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 21

Conread position: 112-627
Cow position: chr3:11254066-11254559 (view UCSC Genome Browser custom track)
Alignm length: 525
Alignm identity: 350
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 8, 22

Conread position: 112-630
Cow position: chr3:80565069-80564540 (view UCSC Genome Browser custom track)
Alignm length: 536
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 130

Conread position: 112-636
Cow position: chr3:12711813-12712351 (view UCSC Genome Browser custom track)
Alignm length: 540
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 22

Conread position: 113-246
Cow position: chr3:67407265-67407397 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 101
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 128, 0

Conread position: 113-261
Cow position: chr3:38100244-38100094 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 112
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 76, 0

Conread position: 113-265
Cow position: chr3:53083883-53084039 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 114
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 22, 0

Conread position: 113-267
Cow position: chr3:64648591-64648439 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 116
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 7, 0

Conread position: 113-269
Cow position: chr3:82629416-82629261 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 121
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 7, 20

Conread position: 113-275
Cow position: chr3:21997687-21997850 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 120
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 7, 22

Conread position: 113-298
Cow position: chr3:4481043-4480858 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 140
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 151, 118

Conread position: 113-303
Cow position: chr3:15173180-15172991 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 139
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 144, 18

Conread position: 113-305
Cow position: chr3:44330336-44330527 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 133
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 153, 0

Conread position: 113-313
Cow position: chr3:19626409-19626606 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 162
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 158, 54

Conread position: 113-313
Cow position: chr3:31361526-31361321 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 152
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 105, 128

Conread position: 113-319
Cow position: chr3:69785524-69785730 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 158
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 109, 16

Conread position: 113-322
Cow position: chr3:3316715-3316918 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 157
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 7, 22

Conread position: 113-322
Cow position: chr3:22165315-22165523 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 156
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 7, 22

Conread position: 113-323
Cow position: chr3:9117127-9116921 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 157
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 96, 0

Conread position: 113-324
Cow position: chr3:15950816-15951019 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 162
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 127, 7

Conread position: 113-339
Cow position: chr3:35621403-35621176 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 167
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 7, 109

Conread position: 113-344
Cow position: chr3:84175721-84175957 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 164
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 7, 148

Conread position: 113-362
Cow position: chr3:22221430-22221170 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 180
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 7, 94

Conread position: 113-365
Cow position: chr3:55177643-55177905 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 197
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 7, 0

Conread position: 113-369
Cow position: chr3:26874690-26874433 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 201
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 160, 8

Conread position: 113-374
Cow position: chr3:53508712-53508460 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 187
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 148, 0

Conread position: 113-376
Cow position: chr3:59883967-59884236 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 181
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 7, 152

Conread position: 113-401
Cow position: chr3:76267874-76268170 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 194
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 158, 266

Conread position: 113-405
Cow position: chr3:57274162-57273872 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 206
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 7, 20

Conread position: 113-411
Cow position: chr3:49790711-49791009 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 201
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 124, 139

Conread position: 113-431
Cow position: chr3:4319811-4319494 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 225
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 7, 22

Conread position: 113-437
Cow position: chr3:83215363-83215031 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 218
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 7, 20

Conread position: 113-444
Cow position: chr3:59621547-59621865 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 221
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 125, 131

Conread position: 113-471
Cow position: chr3:18687007-18686660 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 247
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 201, 151

Conread position: 113-473
Cow position: chr3:61144195-61143835 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 254
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 141, 91

Conread position: 113-476
Cow position: chr3:51233996-51234357 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 20

Conread position: 113-485
Cow position: chr3:70899991-70899630 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 20

Conread position: 113-492
Cow position: chr3:23408257-23408619 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 20

Conread position: 113-494
Cow position: chr3:57624565-57624184 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 270
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 7, 21

Conread position: 113-495
Cow position: chr3:75158456-75158085 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 20

Conread position: 113-497
Cow position: chr3:26681715-26682075 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 0

Conread position: 113-502
Cow position: chr3:73467736-73467332 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 21

Conread position: 113-503
Cow position: chr3:39969761-39970160 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 20

Conread position: 113-503
Cow position: chr3:64280830-64281224 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 20

Conread position: 113-505
Cow position: chr3:23471355-23471758 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 0

Conread position: 113-512
Cow position: chr3:83455051-83455451 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 278
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 160, 55

Conread position: 113-525
Cow position: chr3:27274629-27274229 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 76

Conread position: 113-535
Cow position: chr3:67704645-67704216 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 7

Conread position: 113-536
Cow position: chr3:65058800-65058381 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 125

Conread position: 113-553
Cow position: chr3:80072230-80071777 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 197, 369

Conread position: 113-556
Cow position: chr3:17222038-17222494 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 313

Conread position: 113-558
Cow position: chr3:68707914-68708343 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 265, 7

Conread position: 113-568
Cow position: chr3:3985422-3984974 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 7

Conread position: 113-590
Cow position: chr3:59604944-59604495 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 428, 86

Conread position: 113-610
Cow position: chr3:9641663-9641151 (view UCSC Genome Browser custom track)
Alignm length: 524
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 7

Conread position: 113-610
Cow position: chr3:17936739-17937248 (view UCSC Genome Browser custom track)
Alignm length: 514
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 265, 24

Conread position: 113-610
Cow position: chr3:53046562-53047038 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 21

Conread position: 113-610
Cow position: chr3:53384179-53384681 (view UCSC Genome Browser custom track)
Alignm length: 512
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 40

Conread position: 113-610
Cow position: chr3:61224641-61225137 (view UCSC Genome Browser custom track)
Alignm length: 511
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 20

Conread position: 113-612
Cow position: chr3:45881999-45881506 (view UCSC Genome Browser custom track)
Alignm length: 506
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 428, 152

Conread position: 113-612
Cow position: chr3:59000655-59001139 (view UCSC Genome Browser custom track)
Alignm length: 507
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 79

Conread position: 113-625
Cow position: chr3:14552974-14552465 (view UCSC Genome Browser custom track)
Alignm length: 521
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 7

Conread position: 113-630
Cow position: chr3:65413178-65413704 (view UCSC Genome Browser custom track)
Alignm length: 537
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 202, 21

Conread position: 114-338
Cow position: chr3:54290414-54290635 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 168
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 163, 15

Conread position: 114-421
Cow position: chr3:27696880-27697189 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 218
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 123, 43

Conread position: 114-422
Cow position: chr3:7661950-7661643 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 177
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 179, 6

Conread position: 114-446
Cow position: chr3:78092412-78092740 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 44

Conread position: 114-448
Cow position: chr3:27940043-27940361 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 230
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 195, 94

Conread position: 114-543
Cow position: chr3:78077291-78076864 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 155

Conread position: 114-621
Cow position: chr3:58767361-58766885 (view UCSC Genome Browser custom track)
Alignm length: 512
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 6

Conread position: 114-630
Cow position: chr3:73764101-73764592 (view UCSC Genome Browser custom track)
Alignm length: 529
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 186, 7

Conread position: 115-236
Cow position: chr3:73421396-73421515 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 95
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 16, 0

Conread position: 115-270
Cow position: chr3:49344791-49344637 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 125
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 14, 0

Conread position: 115-406
Cow position: chr3:55318798-55319098 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 206
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 5, 41

Conread position: 115-489
Cow position: chr3:54946232-54945851 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 355

Conread position: 117-260
Cow position: chr3:41652472-41652330 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 114
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 16, 0

Conread position: 117-643
Cow position: chr3:24352956-24352459 (view UCSC Genome Browser custom track)
Alignm length: 534
Alignm identity: 348
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 188, 16

Conread position: 118-354
Cow position: chr3:73820273-73820511 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 160
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 195, 123

Conread position: 118-488
Cow position: chr3:525441-525081 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 15

Conread position: 118-539
Cow position: chr3:55970602-55970183 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 40

Conread position: 118-581
Cow position: chr3:36671899-36672372 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 71

Conread position: 118-610
Cow position: chr3:48252981-48252498 (view UCSC Genome Browser custom track)
Alignm length: 505
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 44

Conread position: 118-623
Cow position: chr3:45183736-45184252 (view UCSC Genome Browser custom track)
Alignm length: 531
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 117

Conread position: 118-629
Cow position: chr3:35852376-35852889 (view UCSC Genome Browser custom track)
Alignm length: 524
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 15

Conread position: 119-265
Cow position: chr3:44960911-44961055 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 116
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 13, 0

Conread position: 119-285
Cow position: chr3:20334103-20333937 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 122
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 14, 148

Conread position: 119-305
Cow position: chr3:18001293-18001112 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 133
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 144, 0

Conread position: 119-311
Cow position: chr3:4549121-4548920 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 150
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 149, 13

Conread position: 119-311
Cow position: chr3:47753320-47753129 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 149
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 121, 13

Conread position: 119-353
Cow position: chr3:60264622-60264856 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 182
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 148, 13

Conread position: 119-354
Cow position: chr3:1785150-1785383 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 171
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 121, 129

Conread position: 119-360
Cow position: chr3:33693913-33693670 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 173
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 171, 14

Conread position: 119-370
Cow position: chr3:77582199-77581951 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 175
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 194, 15

Conread position: 119-379
Cow position: chr3:27108794-27109067 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 190
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 79, 74

Conread position: 119-385
Cow position: chr3:48810552-48810808 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 177
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 15, 0

Conread position: 119-386
Cow position: chr3:19792999-19792717 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 202
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 28, 14

Conread position: 119-386
Cow position: chr3:70762029-70762298 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 13

Conread position: 119-390
Cow position: chr3:58764980-58765255 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 178
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 150, 232

Conread position: 119-396
Cow position: chr3:20677748-20678020 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 212
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 121, 13

Conread position: 119-402
Cow position: chr3:63269317-63269034 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 191
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 121, 22

Conread position: 119-408
Cow position: chr3:30940901-30940623 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 211
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 104, 70

Conread position: 119-438
Cow position: chr3:60265160-60265459 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 231
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 194, 13

Conread position: 119-465
Cow position: chr3:52651985-52652324 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 43

Conread position: 119-479
Cow position: chr3:73461060-73460715 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 13

Conread position: 119-491
Cow position: chr3:13507562-13507190 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 13

Conread position: 119-493
Cow position: chr3:32585244-32584880 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 15

Conread position: 119-495
Cow position: chr3:49482621-49482984 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 272
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 25, 34

Conread position: 119-497
Cow position: chr3:66900639-66901024 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 14

Conread position: 119-504
Cow position: chr3:29596484-29596106 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 270
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 24, 40

Conread position: 119-506
Cow position: chr3:66884935-66885331 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 79

Conread position: 119-561
Cow position: chr3:53150425-53149978 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 13

Conread position: 119-593
Cow position: chr3:13353458-13352980 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 87

Conread position: 119-598
Cow position: chr3:11987423-11986946 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 13

Conread position: 119-612
Cow position: chr3:48296792-48296312 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 187, 14

Conread position: 119-612
Cow position: chr3:77271183-77271676 (view UCSC Genome Browser custom track)
Alignm length: 511
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 195, 76

Conread position: 119-630
Cow position: chr3:64010719-64011232 (view UCSC Genome Browser custom track)
Alignm length: 528
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 28

Conread position: 119-640
Cow position: chr3:73709140-73708635 (view UCSC Genome Browser custom track)
Alignm length: 529
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 14

Conread position: 120-268
Cow position: chr3:3947132-3946984 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 109
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 120-306
Cow position: chr3:71474312-71474498 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 134
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 153, 14

Conread position: 120-461
Cow position: chr3:55835727-55836075 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 174, 0

Conread position: 120-506
Cow position: chr3:15228729-15229110 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 258
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 191, 143

Conread position: 120-512
Cow position: chr3:8394036-8393641 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 263
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 77, 130

Conread position: 120-610
Cow position: chr3:22716203-22716700 (view UCSC Genome Browser custom track)
Alignm length: 518
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 212

Conread position: 120-610
Cow position: chr3:50768773-50768278 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 195, 149

Conread position: 120-610
Cow position: chr3:70565644-70566135 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 193, 152

Conread position: 120-610
Cow position: chr3:75480093-75479622 (view UCSC Genome Browser custom track)
Alignm length: 494
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 193, 70

Conread position: 120-621
Cow position: chr3:49650481-49649971 (view UCSC Genome Browser custom track)
Alignm length: 515
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 13

Conread position: 121-259
Cow position: chr3:50593822-50593957 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 106
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 77, 0

Conread position: 121-506
Cow position: chr3:19006751-19006376 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 77

Conread position: 121-610
Cow position: chr3:29887327-29887821 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 58

Conread position: 122-222
Cow position: chr3:17531646-17531746 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 83
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 122-239
Cow position: chr3:35239104-35238988 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 92
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 37, 0

Conread position: 122-268
Cow position: chr3:68004610-68004756 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 111
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 122-378
Cow position: chr3:58973387-58973138 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 170
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 144, 15

Conread position: 122-382
Cow position: chr3:48072790-48073044 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 193
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 256, 152

Conread position: 122-389
Cow position: chr3:68616238-68616501 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 199
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 142, 76

Conread position: 122-427
Cow position: chr3:36375448-36375760 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 218
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 20, 40

Conread position: 122-431
Cow position: chr3:45211393-45211079 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 216
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 101, 117

Conread position: 122-505
Cow position: chr3:78945747-78946129 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 90

Conread position: 122-506
Cow position: chr3:56059903-56059516 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 295

Conread position: 122-515
Cow position: chr3:82019747-82020149 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 193

Conread position: 122-529
Cow position: chr3:53270922-53270511 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 37

Conread position: 122-540
Cow position: chr3:59451696-59451270 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 296
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 73, 136

Conread position: 122-543
Cow position: chr3:56476774-56476355 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 119

Conread position: 122-578
Cow position: chr3:53428825-53429253 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 352, 121

Conread position: 122-610
Cow position: chr3:16752167-16752644 (view UCSC Genome Browser custom track)
Alignm length: 492
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 79

Conread position: 122-610
Cow position: chr3:18459438-18459917 (view UCSC Genome Browser custom track)
Alignm length: 497
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 15

Conread position: 122-610
Cow position: chr3:26218961-26219458 (view UCSC Genome Browser custom track)
Alignm length: 506
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 19

Conread position: 122-611
Cow position: chr3:14465615-14466102 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 11

Conread position: 122-612
Cow position: chr3:48363164-48362684 (view UCSC Genome Browser custom track)
Alignm length: 495
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 256, 86

Conread position: 122-612
Cow position: chr3:55271953-55272431 (view UCSC Genome Browser custom track)
Alignm length: 496
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 124

Conread position: 122-612
Cow position: chr3:62826527-62827012 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 67

Conread position: 122-612
Cow position: chr3:82056027-82056507 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 336
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 193, 86

Conread position: 122-629
Cow position: chr3:4050285-4049787 (view UCSC Genome Browser custom track)
Alignm length: 527
Alignm identity: 353
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 192, 113

Conread position: 122-631
Cow position: chr3:14626058-14626571 (view UCSC Genome Browser custom track)
Alignm length: 527
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 41

Conread position: 123-287
Cow position: chr3:9588553-9588709 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 120
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 66, 0

Conread position: 123-301
Cow position: chr3:64196917-64196739 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 144
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 0, 0

Conread position: 123-311
Cow position: chr3:49363200-49363020 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 141
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 148, 0

Conread position: 123-322
Cow position: chr3:18607761-18607556 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 161
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 126, 119

Conread position: 123-329
Cow position: chr3:74846618-74846826 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 143
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 154, 132

Conread position: 123-362
Cow position: chr3:79196850-79196610 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 180
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 191, 171

Conread position: 123-370
Cow position: chr3:19585954-19585704 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 190, 77

Conread position: 123-473
Cow position: chr3:8061217-8060874 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 245
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 153, 75

Conread position: 123-495
Cow position: chr3:57764308-57763943 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 18

Conread position: 123-501
Cow position: chr3:38691315-38691692 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 106

Conread position: 123-507
Cow position: chr3:62789083-62789496 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 0

Conread position: 123-517
Cow position: chr3:2216457-2216058 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 11

Conread position: 123-612
Cow position: chr3:9663083-9663586 (view UCSC Genome Browser custom track)
Alignm length: 510
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 18

Conread position: 123-629
Cow position: chr3:49328034-49327534 (view UCSC Genome Browser custom track)
Alignm length: 516
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 14

Conread position: 123-636
Cow position: chr3:53588295-53588813 (view UCSC Genome Browser custom track)
Alignm length: 525
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 190, 23

Conread position: 124-309
Cow position: chr3:32409302-32409118 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 139
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 116, 122

Conread position: 124-380
Cow position: chr3:31850288-31850537 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 170
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 226, 34

Conread position: 124-383
Cow position: chr3:81039660-81039916 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 181
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 40, 10

Conread position: 124-406
Cow position: chr3:54100636-54100913 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 190
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 189, 136

Conread position: 124-502
Cow position: chr3:36100924-36100541 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 263
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 131, 23

Conread position: 124-508
Cow position: chr3:13329696-13330065 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 257
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 76, 104

Conread position: 124-508
Cow position: chr3:27532565-27532955 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 29

Conread position: 124-538
Cow position: chr3:74601204-74600796 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 189, 255

Conread position: 124-569
Cow position: chr3:36204642-36204194 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 297
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 23, 29

Conread position: 124-638
Cow position: chr3:50614731-50614222 (view UCSC Genome Browser custom track)
Alignm length: 523
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 120

Conread position: 125-261
Cow position: chr3:5305887-5305751 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 103
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 115, 121

Conread position: 125-262
Cow position: chr3:51349912-51349775 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 106
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 125-303
Cow position: chr3:19682786-19682605 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 132
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 60, 0

Conread position: 125-313
Cow position: chr3:64135807-64135618 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 136
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 115, 123

Conread position: 125-352
Cow position: chr3:17235128-17235348 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 159
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 128, 46

Conread position: 125-356
Cow position: chr3:76156076-76155844 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 170
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 106, 115

Conread position: 125-399
Cow position: chr3:30222280-30222002 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 189
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 89, 132

Conread position: 125-436
Cow position: chr3:11063454-11063157 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 228
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 253, 25

Conread position: 125-452
Cow position: chr3:17134423-17134102 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 219
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 18, 22

Conread position: 125-480
Cow position: chr3:73395205-73394851 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 37

Conread position: 125-518
Cow position: chr3:70401985-70401600 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 73

Conread position: 125-565
Cow position: chr3:71497049-71497498 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 150

Conread position: 125-608
Cow position: chr3:72391171-72390688 (view UCSC Genome Browser custom track)
Alignm length: 496
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 113

Conread position: 125-610
Cow position: chr3:23168977-23169467 (view UCSC Genome Browser custom track)
Alignm length: 495
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 89

Conread position: 125-623
Cow position: chr3:6690088-6689582 (view UCSC Genome Browser custom track)
Alignm length: 518
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 33

Conread position: 125-626
Cow position: chr3:80581744-80581266 (view UCSC Genome Browser custom track)
Alignm length: 508
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 188, 79

Conread position: 125-627
Cow position: chr3:6873163-6873670 (view UCSC Genome Browser custom track)
Alignm length: 523
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 79

Conread position: 126-298
Cow position: chr3:10668791-10668961 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 133
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 33, 75

Conread position: 126-376
Cow position: chr3:76922575-76922826 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 115

Conread position: 126-386
Cow position: chr3:54506795-54506534 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 118

Conread position: 126-496
Cow position: chr3:77365201-77365575 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 264

Conread position: 126-521
Cow position: chr3:66292088-66292480 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 187, 165

Conread position: 127-447
Cow position: chr3:11712052-11711721 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 229
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 139, 149

Conread position: 128-305
Cow position: chr3:81881356-81881531 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 130
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 72, 102

Conread position: 128-386
Cow position: chr3:62046750-62046487 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 184
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 104, 114

Conread position: 128-392
Cow position: chr3:26982143-26981883 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 186
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 112, 29

Conread position: 128-428
Cow position: chr3:83845998-83845691 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 216
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 112, 18

Conread position: 128-500
Cow position: chr3:5374414-5374051 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 73

Conread position: 128-505
Cow position: chr3:5097293-5096913 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 185, 135

Conread position: 128-505
Cow position: chr3:45647766-45647387 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 191, 363

Conread position: 128-519
Cow position: chr3:66975143-66975554 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 250
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 17, 230

Conread position: 128-526
Cow position: chr3:53739099-53739500 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 135

Conread position: 130-239
Cow position: chr3:16601526-16601417 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 88
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 131-235
Cow position: chr3:31115187-31115291 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 86
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 131-273
Cow position: chr3:23132086-23132228 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 107
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 131-287
Cow position: chr3:74801983-74802139 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 118
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 24, 29

Conread position: 131-353
Cow position: chr3:74584290-74584077 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 165
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 110, 21

Conread position: 131-551
Cow position: chr3:68881039-68881445 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 182, 21

Conread position: 131-594
Cow position: chr3:54781921-54782392 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 15

Conread position: 131-609
Cow position: chr3:50069846-50069391 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 182, 97

Conread position: 131-610
Cow position: chr3:59799331-59798857 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 182, 138

Conread position: 131-630
Cow position: chr3:80740645-80740172 (view UCSC Genome Browser custom track)
Alignm length: 510
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 77

Conread position: 132-406
Cow position: chr3:74079555-74079834 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 66

Conread position: 132-427
Cow position: chr3:6182145-6182415 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 215
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 246, 65

Conread position: 132-508
Cow position: chr3:74533431-74533055 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 114

Conread position: 132-512
Cow position: chr3:44932595-44932217 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 44

Conread position: 132-577
Cow position: chr3:55189671-55190109 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 144

Conread position: 133-316
Cow position: chr3:75608579-75608397 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 144
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 107, 76

Conread position: 133-379
Cow position: chr3:55109532-55109781 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 187
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 131, 238

Conread position: 133-392
Cow position: chr3:34669652-34669909 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 192
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 182, 95

Conread position: 133-396
Cow position: chr3:74502244-74502507 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 174
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 217, 139

Conread position: 133-503
Cow position: chr3:33252808-33253172 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 255
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 181, 94

Conread position: 133-532
Cow position: chr3:53113256-53112851 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 26

Conread position: 133-578
Cow position: chr3:59101908-59101475 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 75

Conread position: 133-579
Cow position: chr3:79884405-79884852 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 28

Conread position: 133-592
Cow position: chr3:28908122-28908582 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 26

Conread position: 133-611
Cow position: chr3:55085088-55085587 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 20

Conread position: 133-623
Cow position: chr3:2506398-2506892 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 41

Conread position: 133-630
Cow position: chr3:59474203-59473699 (view UCSC Genome Browser custom track)
Alignm length: 511
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 131

Conread position: 134-275
Cow position: chr3:71703555-71703417 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 107
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 70, 0

Conread position: 134-305
Cow position: chr3:31350024-31350194 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 132
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 140, 0

Conread position: 134-354
Cow position: chr3:73237276-73237053 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 168
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 106, 114

Conread position: 134-365
Cow position: chr3:46541749-46541980 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 160
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 106, 112

Conread position: 134-485
Cow position: chr3:45279545-45279187 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 246
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 98, 17

Conread position: 134-567
Cow position: chr3:4032043-4031610 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 54

Conread position: 134-612
Cow position: chr3:61840355-61839892 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 74

Conread position: 134-612
Cow position: chr3:71231475-71231007 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 28

Conread position: 134-640
Cow position: chr3:72676171-72675659 (view UCSC Genome Browser custom track)
Alignm length: 518
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 180, 128

Conread position: 134-642
Cow position: chr3:38347270-38346777 (view UCSC Genome Browser custom track)
Alignm length: 514
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 215, 70

Conread position: 135-331
Cow position: chr3:63177562-63177360 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 152
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 142, 0

Conread position: 135-454
Cow position: chr3:22232575-22232882 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 230
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 171, 85

Conread position: 136-506
Cow position: chr3:45534218-45534590 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 61

Conread position: 137-313
Cow position: chr3:3472117-3471941 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 136
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 123, 104

Conread position: 137-395
Cow position: chr3:15751636-15751906 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 183
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 134, 100

Conread position: 137-505
Cow position: chr3:56300-56659 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 84

Conread position: 137-577
Cow position: chr3:58968826-58969252 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 177, 130

Conread position: 137-612
Cow position: chr3:26920987-26920500 (view UCSC Genome Browser custom track)
Alignm length: 493
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 108

Conread position: 138-444
Cow position: chr3:76015368-76015070 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 216
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 176, 153

Conread position: 139-577
Cow position: chr3:22676035-22676443 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 70

Conread position: 140-417
Cow position: chr3:7940483-7940758 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 194
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 123, 68

Conread position: 140-455
Cow position: chr3:39661383-39661690 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 217
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 97, 65

Conread position: 141-431
Cow position: chr3:25945165-25944861 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 217
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 80, 10

Conread position: 141-434
Cow position: chr3:67698348-67698060 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 203
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 135, 10

Conread position: 141-473
Cow position: chr3:30008836-30009168 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 234
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 96, 10

Conread position: 141-543
Cow position: chr3:2396716-2397111 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 170, 68

Conread position: 141-589
Cow position: chr3:31206948-31206497 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 10

Conread position: 141-591
Cow position: chr3:49460854-49461315 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 11

Conread position: 141-610
Cow position: chr3:20130007-20129551 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 10

Conread position: 141-610
Cow position: chr3:61539873-61539400 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 11

Conread position: 141-611
Cow position: chr3:60933489-60933034 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 10

Conread position: 141-623
Cow position: chr3:75711379-75710900 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 118

Conread position: 142-505
Cow position: chr3:54049960-54050309 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 5

Conread position: 142-565
Cow position: chr3:70896120-70895694 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 124

Conread position: 143-428
Cow position: chr3:10896893-10896615 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 204
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 163, 74

Conread position: 143-461
Cow position: chr3:23444817-23445136 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 228
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 97, 246

Conread position: 151-339
Cow position: chr3:12670552-12670741 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 144
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 125, 31

Conread position: 151-401
Cow position: chr3:55434392-55434141 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 176
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 77, 70

Conread position: 151-609
Cow position: chr3:31419755-31419300 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 70

Conread position: 153-600
Cow position: chr3:56582909-56582460 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 169

Conread position: 154-342
Cow position: chr3:478740-478926 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 138
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 112, 50

Conread position: 154-356
Cow position: chr3:54030341-54030139 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 142
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 107, 121

Conread position: 157-313
Cow position: chr3:46108875-46108717 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 117
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 119, 71

Conread position: 158-623
Cow position: chr3:66609788-66610251 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 55

Conread position: 160-428
Cow position: chr3:78896701-78896435 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 186
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 137, 111

Conread position: 160-496
Cow position: chr3:81277638-81277985 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 109

Conread position: 160-574
Cow position: chr3:20437602-20438022 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 303
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 96, 57

Conread position: 160-591
Cow position: chr3:72131244-72131679 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 67

Conread position: 160-592
Cow position: chr3:12674989-12675408 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 293
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 139, 49

Conread position: 161-623
Cow position: chr3:54435029-54434560 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 65

Conread position: 163-386
Cow position: chr3:59035091-59034861 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 159
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 75, 109

Conread position: 163-425
Cow position: chr3:54373809-54374075 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 187
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 74, 81

Conread position: 163-428
Cow position: chr3:76713274-76713535 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 196
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 77, 48

Conread position: 163-499
Cow position: chr3:49139998-49140331 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 234
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 150, 61

Conread position: 163-505
Cow position: chr3:74878538-74878894 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 260
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 150, 109

Conread position: 163-521
Cow position: chr3:65800636-65800289 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 34

Conread position: 163-540
Cow position: chr3:54903615-54903248 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 162, 58

Conread position: 163-587
Cow position: chr3:53572701-53573121 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 94

Conread position: 163-612
Cow position: chr3:57577748-57577301 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 81

Conread position: 163-621
Cow position: chr3:15954034-15954486 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 81

Conread position: 163-627
Cow position: chr3:25690844-25690378 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 81

Conread position: 163-627
Cow position: chr3:67929209-67929684 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 78

Conread position: 163-638
Cow position: chr3:80818768-80818311 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 93

Conread position: 164-489
Cow position: chr3:70334645-70334977 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 230
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 129, 100

Conread position: 165-484
Cow position: chr3:14632934-14633255 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 231
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 99, 171

Conread position: 165-505
Cow position: chr3:17957516-17957177 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 244
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 75, 79

Conread position: 169-327
Cow position: chr3:19162656-19162502 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 123
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 101, 23

Conread position: 169-496
Cow position: chr3:17456223-17456550 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 228
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 186, 106

Conread position: 169-529
Cow position: chr3:23091931-23092300 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 247
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 102, 5

Conread position: 170-392
Cow position: chr3:55819802-55819566 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 167
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 93, 0

Conread position: 171-506
Cow position: chr3:71430161-71430502 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 95

Conread position: 171-643
Cow position: chr3:37186870-37186414 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 66

Conread position: 172-422
Cow position: chr3:83727209-83727458 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 180
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 178, 51

Conread position: 172-447
Cow position: chr3:21547058-21547334 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 191
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 51, 67

Conread position: 172-487
Cow position: chr3:51578279-51578593 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 49

Conread position: 172-553
Cow position: chr3:48851928-48852301 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 56

Conread position: 172-606
Cow position: chr3:17694963-17695396 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 55

Conread position: 172-622
Cow position: chr3:79902538-79902092 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 49

Conread position: 173-313
Cow position: chr3:44625122-44625260 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 106
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 23, 0

Conread position: 174-463
Cow position: chr3:22887889-22888162 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 195
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 172, 54

Conread position: 175-411
Cow position: chr3:53094892-53095136 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 180
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 53, 70

Conread position: 175-453
Cow position: chr3:32183979-32184261 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 187
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 88, 108

Conread position: 175-610
Cow position: chr3:73762425-73762865 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 306
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 64, 53

Conread position: 176-610
Cow position: chr3:33698769-33698328 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 68

Conread position: 181-610
Cow position: chr3:5850896-5851324 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 200, 101

Conread position: 198-358
Cow position: chr3:75105067-75105230 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 120
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 115, 153

Conread position: 201-612
Cow position: chr3:49793409-49793014 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 110

Conread position: 217-484
Cow position: chr3:17450942-17451203 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 55

Conread position: 225-500
Cow position: chr3:19789125-19789404 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 48

Show alignments to all cow chromosomes.