Cow genome map
Conread name: | Lym2-sn39_F12.f |
Conread position: | 1-188 |
Cow position: | chr10:61297202-61297005 (view UCSC Genome Browser custom track) |
Alignm length: | 201 |
Alignm identity: | 146 |
Alignm E-value: | 5e-23 |
Alignm gaps (pig, cow): | 31, 151 |
Conread position: | 1-217 |
Cow position: | chr10:25565374-25565600 (view UCSC Genome Browser custom track) |
Alignm length: | 228 |
Alignm identity: | 170 |
Alignm E-value: | 2e-34 |
Alignm gaps (pig, cow): | 34, 110 |
Conread position: | 1-222 |
Cow position: | chr10:25359271-25359042 (view UCSC Genome Browser custom track) |
Alignm length: | 236 |
Alignm identity: | 175 |
Alignm E-value: | 1e-32 |
Alignm gaps (pig, cow): | 43, 162 |
Conread position: | 1-252 |
Cow position: | chr10:38847245-38846978 (view UCSC Genome Browser custom track) |
Alignm length: | 268 |
Alignm identity: | 184 |
Alignm E-value: | 8e-28 |
Alignm gaps (pig, cow): | 36, 0 |
Conread position: | 1-269 |
Cow position: | chr10:51952730-51953021 (view UCSC Genome Browser custom track) |
Alignm length: | 292 |
Alignm identity: | 207 |
Alignm E-value: | 4e-33 |
Alignm gaps (pig, cow): | 31, 0 |
Conread position: | 1-275 |
Cow position: | chr10:32578175-32577877 (view UCSC Genome Browser custom track) |
Alignm length: | 300 |
Alignm identity: | 215 |
Alignm E-value: | 5e-34 |
Alignm gaps (pig, cow): | 43, 294 |
Conread position: | 1-285 |
Cow position: | chr10:41157322-41157023 (view UCSC Genome Browser custom track) |
Alignm length: | 303 |
Alignm identity: | 214 |
Alignm E-value: | 1e-33 |
Alignm gaps (pig, cow): | 34, 62 |
Conread position: | 1-286 |
Cow position: | chr10:280748-281054 (view UCSC Genome Browser custom track) |
Alignm length: | 309 |
Alignm identity: | 219 |
Alignm E-value: | 2e-34 |
Alignm gaps (pig, cow): | 34, 292 |
Conread position: | 1-286 |
Cow position: | chr10:14803706-14803401 (view UCSC Genome Browser custom track) |
Alignm length: | 308 |
Alignm identity: | 225 |
Alignm E-value: | 3.00004e-41 |
Alignm gaps (pig, cow): | 43, 289 |
Conread position: | 1-410 |
Cow position: | chr10:42109605-42109184 (view UCSC Genome Browser custom track) |
Alignm length: | 433 |
Alignm identity: | 273 |
Alignm E-value: | 4e-21 |
Alignm gaps (pig, cow): | 23, 120 |
Conread position: | 1-411 |
Cow position: | chr10:14859849-14859434 (view UCSC Genome Browser custom track) |
Alignm length: | 428 |
Alignm identity: | 290 |
Alignm E-value: | 3.9937e-43 |
Alignm gaps (pig, cow): | 43, 96 |
Conread position: | 1-422 |
Cow position: | chr10:62408980-62409416 (view UCSC Genome Browser custom track) |
Alignm length: | 448 |
Alignm identity: | 321 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 43, 292 |
Conread position: | 1-441 |
Cow position: | chr10:39041433-39041889 (view UCSC Genome Browser custom track) |
Alignm length: | 467 |
Alignm identity: | 334 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 34, 275 |
Conread position: | 1-443 |
Cow position: | chr10:124181-123741 (view UCSC Genome Browser custom track) |
Alignm length: | 464 |
Alignm identity: | 327 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 34, 88 |
Conread position: | 1-443 |
Cow position: | chr10:38538622-38539076 (view UCSC Genome Browser custom track) |
Alignm length: | 469 |
Alignm identity: | 337 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 43, 78 |
Conread position: | 1-445 |
Cow position: | chr10:60489538-60489071 (view UCSC Genome Browser custom track) |
Alignm length: | 475 |
Alignm identity: | 356 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 34, 160 |
Conread position: | 1-449 |
Cow position: | chr10:1375408-1374948 (view UCSC Genome Browser custom track) |
Alignm length: | 471 |
Alignm identity: | 338 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 34, 274 |
Conread position: | 1-449 |
Cow position: | chr10:49310406-49309955 (view UCSC Genome Browser custom track) |
Alignm length: | 463 |
Alignm identity: | 310 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 43, 120 |
Conread position: | 1-458 |
Cow position: | chr10:19511477-19511011 (view UCSC Genome Browser custom track) |
Alignm length: | 479 |
Alignm identity: | 341 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 51, 264 |
Conread position: | 1-464 |
Cow position: | chr10:32064024-32063541 (view UCSC Genome Browser custom track) |
Alignm length: | 497 |
Alignm identity: | 325 |
Alignm E-value: | 3e-29 |
Alignm gaps (pig, cow): | 43, 125 |
Conread position: | 1-489 |
Cow position: | chr10:19143467-19143978 (view UCSC Genome Browser custom track) |
Alignm length: | 521 |
Alignm identity: | 371 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 43, 298 |
Conread position: | 1-504 |
Cow position: | chr10:37769694-37769174 (view UCSC Genome Browser custom track) |
Alignm length: | 531 |
Alignm identity: | 378 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 43, 285 |
Conread position: | 1-513 |
Cow position: | chr10:29696113-29695591 (view UCSC Genome Browser custom track) |
Alignm length: | 540 |
Alignm identity: | 391 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 43, 93 |
Conread position: | 1-538 |
Cow position: | chr10:10581545-10580969 (view UCSC Genome Browser custom track) |
Alignm length: | 582 |
Alignm identity: | 399 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 43, 398 |
Conread position: | 1-554 |
Cow position: | chr10:29632989-29633516 (view UCSC Genome Browser custom track) |
Alignm length: | 576 |
Alignm identity: | 393 |
Alignm E-value: | 9.99967e-42 |
Alignm gaps (pig, cow): | 43, 18 |
Conread position: | 1-556 |
Cow position: | chr10:276465-275913 (view UCSC Genome Browser custom track) |
Alignm length: | 577 |
Alignm identity: | 409 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 40, 208 |
Conread position: | 1-556 |
Cow position: | chr10:62216478-62215926 (view UCSC Genome Browser custom track) |
Alignm length: | 577 |
Alignm identity: | 413 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 43, 207 |
Conread position: | 1-556 |
Cow position: | chr10:62778215-62777657 (view UCSC Genome Browser custom track) |
Alignm length: | 578 |
Alignm identity: | 420 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 43, 209 |
Conread position: | 1-558 |
Cow position: | chr10:25498227-25497665 (view UCSC Genome Browser custom track) |
Alignm length: | 580 |
Alignm identity: | 427 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 44, 206 |
Conread position: | 1-559 |
Cow position: | chr10:22101113-22100534 (view UCSC Genome Browser custom track) |
Alignm length: | 593 |
Alignm identity: | 407 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 43, 273 |
Conread position: | 1-559 |
Cow position: | chr10:29846738-29847322 (view UCSC Genome Browser custom track) |
Alignm length: | 592 |
Alignm identity: | 407 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 32, 290 |
Conread position: | 1-559 |
Cow position: | chr10:32650604-32650037 (view UCSC Genome Browser custom track) |
Alignm length: | 584 |
Alignm identity: | 410 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 37, 112 |
Conread position: | 1-559 |
Cow position: | chr10:37060801-37060222 (view UCSC Genome Browser custom track) |
Alignm length: | 594 |
Alignm identity: | 405 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 43, 11 |
Conread position: | 1-587 |
Cow position: | chr10:11685792-11686420 (view UCSC Genome Browser custom track) |
Alignm length: | 630 |
Alignm identity: | 424 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 43, 401 |
Conread position: | 1-593 |
Cow position: | chr10:19840024-19839402 (view UCSC Genome Browser custom track) |
Alignm length: | 627 |
Alignm identity: | 417 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 43, 73 |
Conread position: | 1-593 |
Cow position: | chr10:21400800-21401437 (view UCSC Genome Browser custom track) |
Alignm length: | 639 |
Alignm identity: | 417 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 43, 624 |
Conread position: | 1-593 |
Cow position: | chr10:39179655-39179020 (view UCSC Genome Browser custom track) |
Alignm length: | 639 |
Alignm identity: | 411 |
Alignm E-value: | 9.99995e-41 |
Alignm gaps (pig, cow): | 45, 400 |
Conread position: | 1-593 |
Cow position: | chr10:39817478-39818116 (view UCSC Genome Browser custom track) |
Alignm length: | 639 |
Alignm identity: | 426 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 43, 0 |
Conread position: | 1-593 |
Cow position: | chr10:41876790-41876148 (view UCSC Genome Browser custom track) |
Alignm length: | 644 |
Alignm identity: | 427 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 43, 408 |
Conread position: | 1-593 |
Cow position: | chr10:47906649-47906023 (view UCSC Genome Browser custom track) |
Alignm length: | 631 |
Alignm identity: | 395 |
Alignm E-value: | 1e-33 |
Alignm gaps (pig, cow): | 31, 156 |
Conread position: | 1-593 |
Cow position: | chr10:55092982-55092342 (view UCSC Genome Browser custom track) |
Alignm length: | 643 |
Alignm identity: | 433 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 43, 409 |
Conread position: | 2-217 |
Cow position: | chr10:54059481-54059707 (view UCSC Genome Browser custom track) |
Alignm length: | 228 |
Alignm identity: | 158 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 42, 222 |
Conread position: | 2-275 |
Cow position: | chr10:41566981-41566688 (view UCSC Genome Browser custom track) |
Alignm length: | 295 |
Alignm identity: | 206 |
Alignm E-value: | 4e-31 |
Alignm gaps (pig, cow): | 42, 289 |
Conread position: | 2-538 |
Cow position: | chr10:21486787-21486235 (view UCSC Genome Browser custom track) |
Alignm length: | 565 |
Alignm identity: | 389 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 271 |
Conread position: | 2-559 |
Cow position: | chr10:7282812-7283381 (view UCSC Genome Browser custom track) |
Alignm length: | 584 |
Alignm identity: | 407 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 33, 270 |
Conread position: | 2-592 |
Cow position: | chr10:21740878-21741521 (view UCSC Genome Browser custom track) |
Alignm length: | 645 |
Alignm identity: | 412 |
Alignm E-value: | 7e-37 |
Alignm gaps (pig, cow): | 42, 374 |
Conread position: | 3-449 |
Cow position: | chr10:38345493-38345966 (view UCSC Genome Browser custom track) |
Alignm length: | 477 |
Alignm identity: | 336 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 41, 290 |
Conread position: | 3-473 |
Cow position: | chr10:14885980-14886452 (view UCSC Genome Browser custom track) |
Alignm length: | 488 |
Alignm identity: | 319 |
Alignm E-value: | 8e-39 |
Alignm gaps (pig, cow): | 9, 88 |
Conread position: | 3-489 |
Cow position: | chr10:57990094-57990590 (view UCSC Genome Browser custom track) |
Alignm length: | 517 |
Alignm identity: | 363 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 41, 272 |
Conread position: | 4-187 |
Cow position: | chr10:42628535-42628347 (view UCSC Genome Browser custom track) |
Alignm length: | 190 |
Alignm identity: | 144 |
Alignm E-value: | 1e-31 |
Alignm gaps (pig, cow): | 37, 127 |
Conread position: | 4-286 |
Cow position: | chr10:4192343-4192647 (view UCSC Genome Browser custom track) |
Alignm length: | 307 |
Alignm identity: | 222 |
Alignm E-value: | 8e-39 |
Alignm gaps (pig, cow): | 40, 290 |
Conread position: | 4-429 |
Cow position: | chr10:34318394-34318822 (view UCSC Genome Browser custom track) |
Alignm length: | 443 |
Alignm identity: | 304 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 40, 6 |
Conread position: | 4-449 |
Cow position: | chr10:4499577-4499117 (view UCSC Genome Browser custom track) |
Alignm length: | 469 |
Alignm identity: | 325 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 46, 80 |
Conread position: | 6-193 |
Cow position: | chr10:10478277-10478464 (view UCSC Genome Browser custom track) |
Alignm length: | 196 |
Alignm identity: | 147 |
Alignm E-value: | 6e-26 |
Alignm gaps (pig, cow): | 37, 20 |
Conread position: | 6-558 |
Cow position: | chr10:34685762-34685207 (view UCSC Genome Browser custom track) |
Alignm length: | 575 |
Alignm identity: | 418 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 37, 201 |
Conread position: | 8-582 |
Cow position: | chr10:31523704-31523133 (view UCSC Genome Browser custom track) |
Alignm length: | 594 |
Alignm identity: | 423 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 32, 88 |
Conread position: | 8-593 |
Cow position: | chr10:57559687-57560319 (view UCSC Genome Browser custom track) |
Alignm length: | 634 |
Alignm identity: | 412 |
Alignm E-value: | 9.94922e-44 |
Alignm gaps (pig, cow): | 29, 558 |
Conread position: | 9-444 |
Cow position: | chr10:46191238-46190799 (view UCSC Genome Browser custom track) |
Alignm length: | 460 |
Alignm identity: | 320 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 28, 65 |
Conread position: | 32-348 |
Cow position: | chr10:28116606-28116930 (view UCSC Genome Browser custom track) |
Alignm length: | 330 |
Alignm identity: | 223 |
Alignm E-value: | 1e-30 |
Alignm gaps (pig, cow): | 68, 116 |
Conread position: | 42-312 |
Cow position: | chr10:19715222-19715497 (view UCSC Genome Browser custom track) |
Alignm length: | 287 |
Alignm identity: | 210 |
Alignm E-value: | 7e-37 |
Alignm gaps (pig, cow): | 56, 133 |
Conread position: | 42-544 |
Cow position: | chr10:21467079-21466530 (view UCSC Genome Browser custom track) |
Alignm length: | 550 |
Alignm identity: | 362 |
Alignm E-value: | 7e-37 |
Alignm gaps (pig, cow): | 50, 0 |
Conread position: | 42-591 |
Cow position: | chr10:38546399-38546964 (view UCSC Genome Browser custom track) |
Alignm length: | 574 |
Alignm identity: | 436 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 45, 108 |
Conread position: | 43-449 |
Cow position: | chr10:24299029-24299443 (view UCSC Genome Browser custom track) |
Alignm length: | 424 |
Alignm identity: | 314 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 41, 84 |
Conread position: | 47-440 |
Cow position: | chr10:15862479-15862854 (view UCSC Genome Browser custom track) |
Alignm length: | 403 |
Alignm identity: | 264 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 42, 83 |
Conread position: | 50-590 |
Cow position: | chr10:54127275-54126735 (view UCSC Genome Browser custom track) |
Alignm length: | 556 |
Alignm identity: | 414 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 26, 83 |
Conread position: | 51-422 |
Cow position: | chr10:8289785-8289404 (view UCSC Genome Browser custom track) |
Alignm length: | 392 |
Alignm identity: | 284 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 47, 219 |
Conread position: | 53-455 |
Cow position: | chr10:14951526-14951131 (view UCSC Genome Browser custom track) |
Alignm length: | 412 |
Alignm identity: | 290 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 46, 76 |
Conread position: | 84-451 |
Cow position: | chr10:20537201-20536849 (view UCSC Genome Browser custom track) |
Alignm length: | 375 |
Alignm identity: | 245 |
Alignm E-value: | 4e-21 |
Alignm gaps (pig, cow): | 95, 44 |
Conread position: | 89-559 |
Cow position: | chr10:1938070-1938512 (view UCSC Genome Browser custom track) |
Alignm length: | 476 |
Alignm identity: | 313 |
Alignm E-value: | 2e-34 |
Alignm gaps (pig, cow): | 91, 105 |
Conread position: | 90-275 |
Cow position: | chr10:19497143-19497337 (view UCSC Genome Browser custom track) |
Alignm length: | 197 |
Alignm identity: | 141 |
Alignm E-value: | 4e-21 |
Alignm gaps (pig, cow): | 88, 14 |
Conread position: | 93-591 |
Cow position: | chr10:42736274-42735778 (view UCSC Genome Browser custom track) |
Alignm length: | 514 |
Alignm identity: | 363 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 88, 104 |
Conread position: | 115-559 |
Cow position: | chr10:37040832-37040384 (view UCSC Genome Browser custom track) |
Alignm length: | 466 |
Alignm identity: | 316 |
Alignm E-value: | 9.94922e-44 |
Alignm gaps (pig, cow): | 65, 55 |
Conread position: | 151-593 |
Cow position: | chr10:32654433-32653990 (view UCSC Genome Browser custom track) |
Alignm length: | 453 |
Alignm identity: | 285 |
Alignm E-value: | 3e-30 |
Alignm gaps (pig, cow): | 161, 34 |
Conread position: | 179-599 |
Cow position: | chr10:61296981-61296549 (view UCSC Genome Browser custom track) |
Alignm length: | 439 |
Alignm identity: | 336 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 87, 11 |
Conread position: | 186-591 |
Cow position: | chr10:42628139-42627736 (view UCSC Genome Browser custom track) |
Alignm length: | 425 |
Alignm identity: | 302 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 84, 10 |
Conread position: | 219-558 |
Cow position: | chr10:41144682-41145012 (view UCSC Genome Browser custom track) |
Alignm length: | 346 |
Alignm identity: | 242 |
Alignm E-value: | 3e-40 |
Alignm gaps (pig, cow): | 51, 73 |
Conread position: | 229-447 |
Cow position: | chr10:281019-281242 (view UCSC Genome Browser custom track) |
Alignm length: | 226 |
Alignm identity: | 160 |
Alignm E-value: | 8e-28 |
Alignm gaps (pig, cow): | 10, 138 |
Conread position: | 229-593 |
Cow position: | chr10:25565659-25566031 (view UCSC Genome Browser custom track) |
Alignm length: | 375 |
Alignm identity: | 251 |
Alignm E-value: | 3.00004e-41 |
Alignm gaps (pig, cow): | 10, 112 |
Conread position: | 230-559 |
Cow position: | chr10:2123776-2124102 (view UCSC Genome Browser custom track) |
Alignm length: | 342 |
Alignm identity: | 228 |
Alignm E-value: | 7e-27 |
Alignm gaps (pig, cow): | 84, 40 |
Conread position: | 261-582 |
Cow position: | chr10:41566673-41566349 (view UCSC Genome Browser custom track) |
Alignm length: | 328 |
Alignm identity: | 226 |
Alignm E-value: | 1.00053e-42 |
Alignm gaps (pig, cow): | 50, 102 |
Conread position: | 271-593 |
Cow position: | chr10:4192658-4192986 (view UCSC Genome Browser custom track) |
Alignm length: | 330 |
Alignm identity: | 224 |
Alignm E-value: | 9.99995e-41 |
Alignm gaps (pig, cow): | 43, 96 |
Conread position: | 271-593 |
Cow position: | chr10:19497358-19497686 (view UCSC Genome Browser custom track) |
Alignm length: | 330 |
Alignm identity: | 226 |
Alignm E-value: | 3.9937e-43 |
Alignm gaps (pig, cow): | 43, 96 |
Conread position: | 271-593 |
Cow position: | chr10:28641044-28640715 (view UCSC Genome Browser custom track) |
Alignm length: | 333 |
Alignm identity: | 217 |
Alignm E-value: | 9e-29 |
Alignm gaps (pig, cow): | 41, 96 |
Conread position: | 271-593 |
Cow position: | chr10:41157011-41156683 (view UCSC Genome Browser custom track) |
Alignm length: | 330 |
Alignm identity: | 225 |
Alignm E-value: | 3.99931e-42 |
Alignm gaps (pig, cow): | 44, 92 |
Conread position: | 271-593 |
Cow position: | chr10:51953047-51953375 (view UCSC Genome Browser custom track) |
Alignm length: | 330 |
Alignm identity: | 219 |
Alignm E-value: | 2e-36 |
Alignm gaps (pig, cow): | 41, 96 |
Conread position: | 275-558 |
Cow position: | chr10:40425276-40424985 (view UCSC Genome Browser custom track) |
Alignm length: | 295 |
Alignm identity: | 206 |
Alignm E-value: | 2e-36 |
Alignm gaps (pig, cow): | 39, 14 |
Conread position: | 275-591 |
Cow position: | chr10:39780265-39780589 (view UCSC Genome Browser custom track) |
Alignm length: | 327 |
Alignm identity: | 245 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 31, 96 |
Conread position: | 280-593 |
Cow position: | chr10:14803384-14803071 (view UCSC Genome Browser custom track) |
Alignm length: | 321 |
Alignm identity: | 215 |
Alignm E-value: | 1e-32 |
Alignm gaps (pig, cow): | 34, 87 |
Show alignments to all cow chromosomes.