Cow genome map

Conread name: Lym2-sn39_F12.f

Conread position: 1-179
Cow position:
Alignm length: 192
Alignm identity: 141
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 43, 0

Conread position: 1-183
Cow position:
Alignm length: 196
Alignm identity: 150
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 43, 0

Conread position: 1-269
Cow position:
Alignm length: 290
Alignm identity: 205
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 43, 0

Conread position: 1-274
Cow position:
Alignm length: 291
Alignm identity: 174
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 40, 0

Conread position: 1-275
Cow position:
Alignm length: 291
Alignm identity: 209
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 43, 108

Conread position: 1-275
Cow position:
Alignm length: 298
Alignm identity: 213
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 43, 292

Conread position: 1-290
Cow position:
Alignm length: 307
Alignm identity: 222
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 11, 207

Conread position: 1-343
Cow position:
Alignm length: 364
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 207

Conread position: 1-343
Cow position:
Alignm length: 370
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 56

Conread position: 1-411
Cow position:
Alignm length: 424
Alignm identity: 277
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 44, 189

Conread position: 1-437
Cow position:
Alignm length: 459
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 206

Conread position: 1-444
Cow position:
Alignm length: 468
Alignm identity: 294
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 37, 73

Conread position: 1-446
Cow position:
Alignm length: 466
Alignm identity: 300
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 43, 150

Conread position: 1-447
Cow position:
Alignm length: 467
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 184

Conread position: 1-449
Cow position:
Alignm length: 472
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 272

Conread position: 1-449
Cow position:
Alignm length: 476
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 25

Conread position: 1-455
Cow position:
Alignm length: 473
Alignm identity: 295
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 43, 216

Conread position: 1-530
Cow position:
Alignm length: 565
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 276

Conread position: 1-530
Cow position:
Alignm length: 565
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 180

Conread position: 1-538
Cow position:
Alignm length: 573
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 275

Conread position: 1-548
Cow position:
Alignm length: 579
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 141

Conread position: 1-558
Cow position:
Alignm length: 581
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 213

Conread position: 1-558
Cow position:
Alignm length: 581
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 210

Conread position: 1-558
Cow position:
Alignm length: 575
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 205

Conread position: 1-559
Cow position:
Alignm length: 594
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 275

Conread position: 1-559
Cow position:
Alignm length: 591
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 275

Conread position: 1-559
Cow position:
Alignm length: 586
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 262

Conread position: 1-559
Cow position:
Alignm length: 582
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 267

Conread position: 1-562
Cow position:
Alignm length: 602
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 396

Conread position: 1-592
Cow position:
Alignm length: 636
Alignm identity: 480
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 150

Conread position: 1-593
Cow position:
Alignm length: 642
Alignm identity: 417
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 43, 183

Conread position: 1-593
Cow position:
Alignm length: 646
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 79

Conread position: 1-594
Cow position:
Alignm length: 624
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 264

Conread position: 1-595
Cow position:
Alignm length: 614
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 17

Conread position: 2-538
Cow position:
Alignm length: 567
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 155

Conread position: 3-188
Cow position:
Alignm length: 201
Alignm identity: 146
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 31, 17

Conread position: 3-410
Cow position:
Alignm length: 428
Alignm identity: 288
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 41, 25

Conread position: 3-428
Cow position:
Alignm length: 447
Alignm identity: 291
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 36, 220

Conread position: 3-550
Cow position:
Alignm length: 581
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 272

Conread position: 3-559
Cow position:
Alignm length: 592
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 288

Conread position: 4-217
Cow position:
Alignm length: 235
Alignm identity: 169
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 31, 0

Conread position: 4-448
Cow position:
Alignm length: 468
Alignm identity: 312
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 40, 170

Conread position: 4-537
Cow position:
Alignm length: 567
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 271

Conread position: 4-556
Cow position:
Alignm length: 578
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 387

Conread position: 4-556
Cow position:
Alignm length: 577
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 128

Conread position: 4-590
Cow position:
Alignm length: 612
Alignm identity: 391
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 40, 8

Conread position: 4-600
Cow position:
Alignm length: 622
Alignm identity: 477
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 72

Conread position: 5-593
Cow position:
Alignm length: 619
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 102

Conread position: 6-429
Cow position:
Alignm length: 438
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 124

Conread position: 6-517
Cow position:
Alignm length: 531
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 186

Conread position: 6-558
Cow position:
Alignm length: 587
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 18

Conread position: 8-449
Cow position:
Alignm length: 464
Alignm identity: 309
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 35, 62

Conread position: 8-449
Cow position:
Alignm length: 464
Alignm identity: 309
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 35, 62

Conread position: 9-559
Cow position:
Alignm length: 568
Alignm identity: 368
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 35, 111

Conread position: 14-591
Cow position:
Alignm length: 604
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 144

Conread position: 31-559
Cow position:
Alignm length: 558
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 240

Conread position: 31-591
Cow position:
Alignm length: 598
Alignm identity: 445
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 368

Conread position: 42-214
Cow position:
Alignm length: 183
Alignm identity: 136
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 48, 92

Conread position: 42-275
Cow position:
Alignm length: 244
Alignm identity: 173
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 137, 238

Conread position: 42-334
Cow position:
Alignm length: 303
Alignm identity: 223
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 53, 160

Conread position: 42-555
Cow position:
Alignm length: 527
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 104

Conread position: 42-558
Cow position:
Alignm length: 525
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 89

Conread position: 42-593
Cow position:
Alignm length: 591
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 187

Conread position: 43-229
Cow position:
Alignm length: 195
Alignm identity: 136
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 43, 91

Conread position: 43-275
Cow position:
Alignm length: 254
Alignm identity: 186
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 44, 248

Conread position: 43-440
Cow position:
Alignm length: 418
Alignm identity: 265
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 43, 70

Conread position: 43-449
Cow position:
Alignm length: 429
Alignm identity: 287
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 48, 250

Conread position: 43-463
Cow position:
Alignm length: 445
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 119

Conread position: 46-445
Cow position:
Alignm length: 419
Alignm identity: 270
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 40, 151

Conread position: 47-459
Cow position:
Alignm length: 434
Alignm identity: 285
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 92, 11

Conread position: 50-441
Cow position:
Alignm length: 411
Alignm identity: 267
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 36, 16

Conread position: 71-275
Cow position:
Alignm length: 221
Alignm identity: 159
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 28, 215

Conread position: 72-275
Cow position:
Alignm length: 220
Alignm identity: 158
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 20, 214

Conread position: 89-428
Cow position:
Alignm length: 343
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 108

Conread position: 89-593
Cow position:
Alignm length: 528
Alignm identity: 321
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 18, 121

Conread position: 143-444
Cow position:
Alignm length: 313
Alignm identity: 210
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 42, 94

Conread position: 188-593
Cow position:
Alignm length: 431
Alignm identity: 283
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 51, 180

Conread position: 192-591
Cow position:
Alignm length: 413
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 41

Conread position: 205-427
Cow position:
Alignm length: 227
Alignm identity: 159
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 13, 66

Conread position: 205-559
Cow position:
Alignm length: 365
Alignm identity: 238
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 13, 50

Conread position: 229-593
Cow position:
Alignm length: 376
Alignm identity: 250
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 10, 142

Conread position: 229-593
Cow position:
Alignm length: 378
Alignm identity: 247
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 10, 142

Conread position: 235-558
Cow position:
Alignm length: 331
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 140

Conread position: 258-553
Cow position:
Alignm length: 297
Alignm identity: 175
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 186, 83

Conread position: 271-558
Cow position:
Alignm length: 298
Alignm identity: 210
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 43, 96

Conread position: 271-593
Cow position:
Alignm length: 331
Alignm identity: 212
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 41, 96

Conread position: 271-593
Cow position:
Alignm length: 331
Alignm identity: 220
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 41, 96

Conread position: 271-593
Cow position:
Alignm length: 330
Alignm identity: 216
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 43, 96

Conread position: 271-593
Cow position:
Alignm length: 327
Alignm identity: 219
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 182, 89

Conread position: 273-558
Cow position:
Alignm length: 289
Alignm identity: 203
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 11, 96

Conread position: 278-456
Cow position:
Alignm length: 185
Alignm identity: 140
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 34, 10

Conread position: 299-593
Cow position:
Alignm length: 297
Alignm identity: 189
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 145, 77

Conread position: 333-558
Cow position:
Alignm length: 236
Alignm identity: 161
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 111, 6

Conread position: 339-558
Cow position:
Alignm length: 221
Alignm identity: 157
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 105, 29

Show alignments to all cow chromosomes.