Cow genome map
| Conread name: | Lym2-sn39_F12.f |
| Conread position: | 1-156 |
| Cow position: | chr15:4733315-4733149 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 131 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 1-170 |
| Cow position: | chr15:4195916-4195741 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 43, 94 |
| Conread position: | 1-190 |
| Cow position: | chr15:4670872-4670674 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 154 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 51, 27 |
| Conread position: | 1-197 |
| Cow position: | chr15:36970377-36970167 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 1-252 |
| Cow position: | chr15:19738596-19738868 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 206 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 1-268 |
| Cow position: | chr15:17291909-17291635 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 208 |
| Alignm E-value: | 9.00054e-42 |
| Alignm gaps (pig, cow): | 43, 218 |
| Conread position: | 1-268 |
| Cow position: | chr15:20748869-20748576 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 211 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 1-275 |
| Cow position: | chr15:2006993-2006699 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 207 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 37, 208 |
| Conread position: | 1-275 |
| Cow position: | chr15:2648203-2648496 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 209 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 43, 154 |
| Conread position: | 1-275 |
| Cow position: | chr15:7544333-7544039 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 215 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 43, 290 |
| Conread position: | 1-275 |
| Cow position: | chr15:11598661-11598954 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 207 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 41, 289 |
| Conread position: | 1-275 |
| Cow position: | chr15:13428497-13428206 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 210 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 43, 287 |
| Conread position: | 1-275 |
| Cow position: | chr15:22204660-22204956 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 209 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 43, 292 |
| Conread position: | 1-275 |
| Cow position: | chr15:50144959-50144656 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 212 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 43, 299 |
| Conread position: | 1-315 |
| Cow position: | chr15:49676481-49676160 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 236 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 43, 93 |
| Conread position: | 1-320 |
| Cow position: | chr15:51800193-51799858 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 239 |
| Alignm E-value: | 9.00054e-42 |
| Alignm gaps (pig, cow): | 43, 15 |
| Conread position: | 1-366 |
| Cow position: | chr15:24294544-24294173 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 251 |
| Conread position: | 1-372 |
| Cow position: | chr15:2676846-2677234 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 258 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 33, 279 |
| Conread position: | 1-425 |
| Cow position: | chr15:44069246-44068813 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 283 |
| Conread position: | 1-426 |
| Cow position: | chr15:6156510-6156949 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 293 |
| Conread position: | 1-426 |
| Cow position: | chr15:18333374-18333815 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 284 |
| Conread position: | 1-426 |
| Cow position: | chr15:31358356-31357916 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 62 |
| Conread position: | 1-430 |
| Cow position: | chr15:1763545-1763089 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 391 |
| Conread position: | 1-432 |
| Cow position: | chr15:15347667-15348112 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 282 |
| Conread position: | 1-437 |
| Cow position: | chr15:21816294-21816743 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 105 |
| Conread position: | 1-440 |
| Cow position: | chr15:35681215-35681649 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 301 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 43, 61 |
| Conread position: | 1-440 |
| Cow position: | chr15:35747749-35747322 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 193 |
| Conread position: | 1-449 |
| Cow position: | chr15:7836697-7836234 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 245 |
| Conread position: | 1-455 |
| Cow position: | chr15:21448518-21448055 (view UCSC Genome Browser custom track) |
| Alignm length: | 476 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 89 |
| Conread position: | 1-463 |
| Cow position: | chr15:1662836-1662371 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 312 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 44, 30 |
| Conread position: | 1-504 |
| Cow position: | chr15:2902696-2903197 (view UCSC Genome Browser custom track) |
| Alignm length: | 522 |
| Alignm identity: | 358 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 270 |
| Conread position: | 1-508 |
| Cow position: | chr15:36642084-36641560 (view UCSC Genome Browser custom track) |
| Alignm length: | 534 |
| Alignm identity: | 399 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 238 |
| Conread position: | 1-528 |
| Cow position: | chr15:4961107-4960580 (view UCSC Genome Browser custom track) |
| Alignm length: | 544 |
| Alignm identity: | 370 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 200 |
| Conread position: | 1-533 |
| Cow position: | chr15:35734914-35734364 (view UCSC Genome Browser custom track) |
| Alignm length: | 560 |
| Alignm identity: | 411 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 222 |
| Conread position: | 1-539 |
| Cow position: | chr15:18576177-18575619 (view UCSC Genome Browser custom track) |
| Alignm length: | 571 |
| Alignm identity: | 403 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 275 |
| Conread position: | 1-550 |
| Cow position: | chr15:6554399-6554971 (view UCSC Genome Browser custom track) |
| Alignm length: | 581 |
| Alignm identity: | 396 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 313 |
| Conread position: | 1-555 |
| Cow position: | chr15:4677949-4677396 (view UCSC Genome Browser custom track) |
| Alignm length: | 571 |
| Alignm identity: | 367 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 73 |
| Conread position: | 1-555 |
| Cow position: | chr15:6078185-6077638 (view UCSC Genome Browser custom track) |
| Alignm length: | 574 |
| Alignm identity: | 410 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 188 |
| Conread position: | 1-556 |
| Cow position: | chr15:21960966-21960417 (view UCSC Genome Browser custom track) |
| Alignm length: | 574 |
| Alignm identity: | 421 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 208 |
| Conread position: | 1-556 |
| Cow position: | chr15:41365636-41365075 (view UCSC Genome Browser custom track) |
| Alignm length: | 587 |
| Alignm identity: | 406 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 209 |
| Conread position: | 1-558 |
| Cow position: | chr15:6277802-6278359 (view UCSC Genome Browser custom track) |
| Alignm length: | 580 |
| Alignm identity: | 410 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 207 |
| Conread position: | 1-558 |
| Cow position: | chr15:7894745-7895293 (view UCSC Genome Browser custom track) |
| Alignm length: | 579 |
| Alignm identity: | 411 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 177 |
| Conread position: | 1-559 |
| Cow position: | chr15:525400-525972 (view UCSC Genome Browser custom track) |
| Alignm length: | 593 |
| Alignm identity: | 400 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 60 |
| Conread position: | 1-560 |
| Cow position: | chr15:51216047-51215464 (view UCSC Genome Browser custom track) |
| Alignm length: | 591 |
| Alignm identity: | 402 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 243 |
| Conread position: | 1-562 |
| Cow position: | chr15:316876-317455 (view UCSC Genome Browser custom track) |
| Alignm length: | 590 |
| Alignm identity: | 394 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 243 |
| Conread position: | 1-580 |
| Cow position: | chr15:53338491-53337904 (view UCSC Genome Browser custom track) |
| Alignm length: | 608 |
| Alignm identity: | 416 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 65 |
| Conread position: | 1-589 |
| Cow position: | chr15:10787637-10788221 (view UCSC Genome Browser custom track) |
| Alignm length: | 610 |
| Alignm identity: | 426 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 205 |
| Conread position: | 1-590 |
| Cow position: | chr15:32680094-32680714 (view UCSC Genome Browser custom track) |
| Alignm length: | 627 |
| Alignm identity: | 447 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 248 |
| Conread position: | 1-591 |
| Cow position: | chr15:7933432-7932833 (view UCSC Genome Browser custom track) |
| Alignm length: | 625 |
| Alignm identity: | 450 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 145 |
| Conread position: | 1-591 |
| Cow position: | chr15:32693014-32692384 (view UCSC Genome Browser custom track) |
| Alignm length: | 635 |
| Alignm identity: | 455 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 146 |
| Conread position: | 1-593 |
| Cow position: | chr15:18268534-18269160 (view UCSC Genome Browser custom track) |
| Alignm length: | 637 |
| Alignm identity: | 415 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 43, 108 |
| Conread position: | 1-593 |
| Cow position: | chr15:32709998-32709359 (view UCSC Genome Browser custom track) |
| Alignm length: | 642 |
| Alignm identity: | 420 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 579 |
| Conread position: | 2-268 |
| Cow position: | chr15:21877902-21878190 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 204 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 2-286 |
| Cow position: | chr15:690247-689961 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 222 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 176, 35 |
| Conread position: | 2-333 |
| Cow position: | chr15:1771954-1771597 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 215 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 2-400 |
| Cow position: | chr15:4764665-4764248 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 286 |
| Conread position: | 2-464 |
| Cow position: | chr15:4384727-4384246 (view UCSC Genome Browser custom track) |
| Alignm length: | 492 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 274 |
| Conread position: | 2-555 |
| Cow position: | chr15:6650600-6651137 (view UCSC Genome Browser custom track) |
| Alignm length: | 564 |
| Alignm identity: | 398 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 188 |
| Conread position: | 2-556 |
| Cow position: | chr15:36648366-36647820 (view UCSC Genome Browser custom track) |
| Alignm length: | 574 |
| Alignm identity: | 405 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 207 |
| Conread position: | 2-559 |
| Cow position: | chr15:32494933-32495510 (view UCSC Genome Browser custom track) |
| Alignm length: | 590 |
| Alignm identity: | 400 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 271 |
| Conread position: | 2-559 |
| Cow position: | chr15:42490657-42490082 (view UCSC Genome Browser custom track) |
| Alignm length: | 584 |
| Alignm identity: | 394 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 130 |
| Conread position: | 2-590 |
| Cow position: | chr15:370204-370832 (view UCSC Genome Browser custom track) |
| Alignm length: | 634 |
| Alignm identity: | 441 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 379 |
| Conread position: | 2-593 |
| Cow position: | chr15:1519691-1520321 (view UCSC Genome Browser custom track) |
| Alignm length: | 632 |
| Alignm identity: | 391 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 42, 340 |
| Conread position: | 2-593 |
| Cow position: | chr15:17080736-17081370 (view UCSC Genome Browser custom track) |
| Alignm length: | 637 |
| Alignm identity: | 412 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 42, 179 |
| Conread position: | 2-593 |
| Cow position: | chr15:22920578-22919946 (view UCSC Genome Browser custom track) |
| Alignm length: | 634 |
| Alignm identity: | 418 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 183 |
| Conread position: | 2-593 |
| Cow position: | chr15:50124483-50125118 (view UCSC Genome Browser custom track) |
| Alignm length: | 639 |
| Alignm identity: | 400 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 42, 290 |
| Conread position: | 3-217 |
| Cow position: | chr15:42320964-42321195 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 163 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 3-246 |
| Cow position: | chr15:7233763-7233514 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 178 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 41, 94 |
| Conread position: | 3-268 |
| Cow position: | chr15:7260079-7259791 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 198 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 41, 138 |
| Conread position: | 3-300 |
| Cow position: | chr15:55652-55342 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 223 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 41, 94 |
| Conread position: | 3-331 |
| Cow position: | chr15:2011535-2011192 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 272 |
| Conread position: | 3-446 |
| Cow position: | chr15:2923967-2923500 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 119 |
| Conread position: | 3-450 |
| Cow position: | chr15:45886259-45885810 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 310 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 13, 96 |
| Conread position: | 3-582 |
| Cow position: | chr15:4649288-4648701 (view UCSC Genome Browser custom track) |
| Alignm length: | 599 |
| Alignm identity: | 418 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 242 |
| Conread position: | 4-290 |
| Cow position: | chr15:6594374-6594684 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 225 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 40, 153 |
| Conread position: | 4-424 |
| Cow position: | chr15:32722731-32723164 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 300 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 40, 11 |
| Conread position: | 4-428 |
| Cow position: | chr15:37391958-37391517 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 289 |
| Conread position: | 4-538 |
| Cow position: | chr15:17039802-17040353 (view UCSC Genome Browser custom track) |
| Alignm length: | 566 |
| Alignm identity: | 390 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 22 |
| Conread position: | 4-556 |
| Cow position: | chr15:17271922-17272456 (view UCSC Genome Browser custom track) |
| Alignm length: | 578 |
| Alignm identity: | 411 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 22 |
| Conread position: | 4-593 |
| Cow position: | chr15:1781704-1781080 (view UCSC Genome Browser custom track) |
| Alignm length: | 629 |
| Alignm identity: | 421 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 101 |
| Conread position: | 5-210 |
| Cow position: | chr15:3843371-3843587 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 154 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 39, 152 |
| Conread position: | 5-219 |
| Cow position: | chr15:3261955-3262185 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 174 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 32, 132 |
| Conread position: | 6-193 |
| Cow position: | chr15:23157379-23157582 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 38, 167 |
| Conread position: | 6-385 |
| Cow position: | chr15:685614-685215 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 354 |
| Conread position: | 6-449 |
| Cow position: | chr15:12614514-12614065 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 299 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 41, 84 |
| Conread position: | 6-518 |
| Cow position: | chr15:8000794-8001287 (view UCSC Genome Browser custom track) |
| Alignm length: | 527 |
| Alignm identity: | 360 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 80 |
| Conread position: | 6-591 |
| Cow position: | chr15:24793505-24792908 (view UCSC Genome Browser custom track) |
| Alignm length: | 610 |
| Alignm identity: | 460 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 239 |
| Conread position: | 7-449 |
| Cow position: | chr15:38957574-38958034 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 316 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 37, 323 |
| Conread position: | 7-555 |
| Cow position: | chr15:6371392-6371947 (view UCSC Genome Browser custom track) |
| Alignm length: | 571 |
| Alignm identity: | 417 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 126 |
| Conread position: | 11-259 |
| Cow position: | chr15:17787714-17787970 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 186 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 63, 23 |
| Conread position: | 30-161 |
| Cow position: | chr15:6472492-6472623 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 13, 70 |
| Conread position: | 31-193 |
| Cow position: | chr15:25789773-25789943 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 141 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 31-440 |
| Cow position: | chr15:14583184-14583614 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 289 |
| Conread position: | 31-464 |
| Cow position: | chr15:35754406-35754842 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 204 |
| Conread position: | 31-530 |
| Cow position: | chr15:6386876-6387399 (view UCSC Genome Browser custom track) |
| Alignm length: | 526 |
| Alignm identity: | 396 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 354 |
| Conread position: | 31-539 |
| Cow position: | chr15:2076074-2075556 (view UCSC Genome Browser custom track) |
| Alignm length: | 536 |
| Alignm identity: | 374 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 120 |
| Conread position: | 31-558 |
| Cow position: | chr15:4795096-4794575 (view UCSC Genome Browser custom track) |
| Alignm length: | 541 |
| Alignm identity: | 385 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 169 |
| Conread position: | 31-579 |
| Cow position: | chr15:10888027-10887440 (view UCSC Genome Browser custom track) |
| Alignm length: | 592 |
| Alignm identity: | 392 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 83 |
| Conread position: | 39-448 |
| Cow position: | chr15:11299309-11299710 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 279 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 142, 42 |
| Conread position: | 42-185 |
| Cow position: | chr15:4921552-4921403 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 42-199 |
| Cow position: | chr15:3038115-3038283 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 52, 160 |
| Conread position: | 42-275 |
| Cow position: | chr15:4143355-4143599 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 173 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 51, 240 |
| Conread position: | 42-286 |
| Cow position: | chr15:2593401-2593650 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 182 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 138, 68 |
| Conread position: | 42-286 |
| Cow position: | chr15:28490738-28490985 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 185 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 136, 47 |
| Conread position: | 42-432 |
| Cow position: | chr15:20080099-20080493 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 260 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 44, 162 |
| Conread position: | 42-440 |
| Cow position: | chr15:25135062-25135444 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 278 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 156, 47 |
| Conread position: | 42-444 |
| Cow position: | chr15:38979323-38978897 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 289 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 50, 264 |
| Conread position: | 42-541 |
| Cow position: | chr15:12421758-12422272 (view UCSC Genome Browser custom track) |
| Alignm length: | 527 |
| Alignm identity: | 371 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 227 |
| Conread position: | 42-561 |
| Cow position: | chr15:44828220-44827674 (view UCSC Genome Browser custom track) |
| Alignm length: | 558 |
| Alignm identity: | 374 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 297 |
| Conread position: | 42-573 |
| Cow position: | chr15:6456695-6456153 (view UCSC Genome Browser custom track) |
| Alignm length: | 555 |
| Alignm identity: | 400 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 223 |
| Conread position: | 42-591 |
| Cow position: | chr15:8098889-8098321 (view UCSC Genome Browser custom track) |
| Alignm length: | 575 |
| Alignm identity: | 416 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 19 |
| Conread position: | 42-591 |
| Cow position: | chr15:35648809-35649351 (view UCSC Genome Browser custom track) |
| Alignm length: | 565 |
| Alignm identity: | 417 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 128 |
| Conread position: | 43-413 |
| Cow position: | chr15:7928036-7927657 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 260 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 62, 97 |
| Conread position: | 43-440 |
| Cow position: | chr15:490749-491171 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 287 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 49, 224 |
| Conread position: | 43-592 |
| Cow position: | chr15:327813-327252 (view UCSC Genome Browser custom track) |
| Alignm length: | 573 |
| Alignm identity: | 405 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 79 |
| Conread position: | 49-441 |
| Cow position: | chr15:1236799-1236424 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 274 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 51, 129 |
| Conread position: | 55-449 |
| Cow position: | chr15:21666627-21667028 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 231 |
| Conread position: | 61-279 |
| Cow position: | chr15:8673161-8673393 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 37, 222 |
| Conread position: | 70-557 |
| Cow position: | chr15:6184480-6184007 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 361 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 98 |
| Conread position: | 80-437 |
| Cow position: | chr15:4630552-4630926 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 264 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 50, 179 |
| Conread position: | 82-446 |
| Cow position: | chr15:52635524-52635152 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 17 |
| Conread position: | 85-451 |
| Cow position: | chr15:40104809-40104450 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 248 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 10, 118 |
| Conread position: | 85-593 |
| Cow position: | chr15:11598778-11599303 (view UCSC Genome Browser custom track) |
| Alignm length: | 531 |
| Alignm identity: | 325 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 97, 22 |
| Conread position: | 98-449 |
| Cow position: | chr15:36627260-36627619 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 131 |
| Conread position: | 126-449 |
| Cow position: | chr15:15266474-15266804 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 228 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 75, 133 |
| Conread position: | 150-503 |
| Cow position: | chr15:21623434-21623068 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 226 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 10, 24 |
| Conread position: | 159-570 |
| Cow position: | chr15:7259868-7259458 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 276 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 91, 30 |
| Conread position: | 162-593 |
| Cow position: | chr15:17291692-17291259 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 302 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 62, 19 |
| Conread position: | 167-559 |
| Cow position: | chr15:4921136-4920739 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 276 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 14, 7 |
| Conread position: | 186-538 |
| Cow position: | chr15:12272535-12272890 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 249 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 11, 91 |
| Conread position: | 198-558 |
| Cow position: | chr15:3038244-3038600 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 255 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 21, 82 |
| Conread position: | 203-535 |
| Cow position: | chr15:55417-55076 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 228 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 36, 94 |
| Conread position: | 203-582 |
| Cow position: | chr15:8749466-8749082 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 264 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 55, 10 |
| Conread position: | 204-593 |
| Cow position: | chr15:6473987-6474383 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 260 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 17, 148 |
| Conread position: | 206-545 |
| Cow position: | chr15:25790226-25790573 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 243 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 15, 148 |
| Conread position: | 206-556 |
| Cow position: | chr15:23157855-23158192 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 249 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 15, 66 |
| Conread position: | 217-518 |
| Cow position: | chr15:4732839-4732546 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 207 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 228, 53 |
| Conread position: | 217-595 |
| Cow position: | chr15:2593600-2593985 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 265 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 9, 158 |
| Conread position: | 221-547 |
| Cow position: | chr15:38195317-38194998 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 233 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 91, 46 |
| Conread position: | 229-592 |
| Cow position: | chr15:17345086-17345456 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 256 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 8, 76 |
| Conread position: | 235-559 |
| Cow position: | chr15:3262459-3262785 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 214 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 77, 35 |
| Conread position: | 260-593 |
| Cow position: | chr15:4807585-4807246 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 224 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 28, 109 |
| Conread position: | 263-593 |
| Cow position: | chr15:7544026-7543689 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 228 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 51, 116 |
| Conread position: | 271-449 |
| Cow position: | chr15:12364566-12364387 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 129 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 44, 101 |
| Conread position: | 271-593 |
| Cow position: | chr15:2640835-2640506 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 220 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 41, 96 |
| Conread position: | 271-593 |
| Cow position: | chr15:7186900-7187230 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 215 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 41, 92 |
| Conread position: | 271-593 |
| Cow position: | chr15:7233076-7232750 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 226 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 43, 106 |
| Conread position: | 271-593 |
| Cow position: | chr15:8673410-8673737 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 222 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 43, 96 |
| Conread position: | 271-593 |
| Cow position: | chr15:13428185-13427857 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 221 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 41, 96 |
| Conread position: | 271-593 |
| Cow position: | chr15:21878217-21878546 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 220 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 41, 96 |
| Conread position: | 271-599 |
| Cow position: | chr15:20748549-20748214 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 220 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 41, 96 |
| Conread position: | 289-506 |
| Cow position: | chr15:13520848-13520632 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 165 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 23, 75 |
| Conread position: | 303-551 |
| Cow position: | chr15:4667513-4667268 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 141, 65 |
| Conread position: | 315-449 |
| Cow position: | chr15:51799604-51799472 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 103 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 354-554 |
| Cow position: | chr15:32653244-32653046 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 141 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 90, 14 |
| Conread position: | 460-589 |
| Cow position: | chr15:16591120-16591251 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 106 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 52, 24 |
Show alignments to all cow chromosomes.