Cow genome map
Conread name: | Lym2-sn39_F12.f |
Conread position: | 1-183 |
Cow position: | chr16:27734698-27734893 (view UCSC Genome Browser custom track) |
Alignm length: | 196 |
Alignm identity: | 147 |
Alignm E-value: | 7e-29 |
Alignm gaps (pig, cow): | 34, 0 |
Conread position: | 1-187 |
Cow position: | chr16:23982418-23982218 (view UCSC Genome Browser custom track) |
Alignm length: | 201 |
Alignm identity: | 153 |
Alignm E-value: | 1e-32 |
Alignm gaps (pig, cow): | 43, 0 |
Conread position: | 1-193 |
Cow position: | chr16:6549415-6549620 (view UCSC Genome Browser custom track) |
Alignm length: | 207 |
Alignm identity: | 165 |
Alignm E-value: | 2e-39 |
Alignm gaps (pig, cow): | 43, 64 |
Conread position: | 1-217 |
Cow position: | chr16:32605934-32605701 (view UCSC Genome Browser custom track) |
Alignm length: | 234 |
Alignm identity: | 170 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 34, 0 |
Conread position: | 1-219 |
Cow position: | chr16:15369540-15369313 (view UCSC Genome Browser custom track) |
Alignm length: | 229 |
Alignm identity: | 179 |
Alignm E-value: | 9.94922e-44 |
Alignm gaps (pig, cow): | 36, 132 |
Conread position: | 1-225 |
Cow position: | chr16:26662854-26662621 (view UCSC Genome Browser custom track) |
Alignm length: | 237 |
Alignm identity: | 178 |
Alignm E-value: | 1e-35 |
Alignm gaps (pig, cow): | 28, 18 |
Conread position: | 1-230 |
Cow position: | chr16:42740315-42740554 (view UCSC Genome Browser custom track) |
Alignm length: | 242 |
Alignm identity: | 185 |
Alignm E-value: | 9.00054e-42 |
Alignm gaps (pig, cow): | 43, 220 |
Conread position: | 1-268 |
Cow position: | chr16:28171252-28171543 (view UCSC Genome Browser custom track) |
Alignm length: | 292 |
Alignm identity: | 215 |
Alignm E-value: | 9.00054e-42 |
Alignm gaps (pig, cow): | 43, 0 |
Conread position: | 1-273 |
Cow position: | chr16:31376137-31376412 (view UCSC Genome Browser custom track) |
Alignm length: | 281 |
Alignm identity: | 198 |
Alignm E-value: | 4e-35 |
Alignm gaps (pig, cow): | 179, 25 |
Conread position: | 1-275 |
Cow position: | chr16:31855-31574 (view UCSC Genome Browser custom track) |
Alignm length: | 288 |
Alignm identity: | 199 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 91, 51 |
Conread position: | 1-275 |
Cow position: | chr16:5918591-5918292 (view UCSC Genome Browser custom track) |
Alignm length: | 301 |
Alignm identity: | 209 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 43, 295 |
Conread position: | 1-275 |
Cow position: | chr16:15491814-15491532 (view UCSC Genome Browser custom track) |
Alignm length: | 292 |
Alignm identity: | 213 |
Alignm E-value: | 5e-36 |
Alignm gaps (pig, cow): | 34, 160 |
Conread position: | 1-275 |
Cow position: | chr16:21185388-21185092 (view UCSC Genome Browser custom track) |
Alignm length: | 298 |
Alignm identity: | 210 |
Alignm E-value: | 1e-32 |
Alignm gaps (pig, cow): | 43, 292 |
Conread position: | 1-309 |
Cow position: | chr16:31592800-31593130 (view UCSC Genome Browser custom track) |
Alignm length: | 332 |
Alignm identity: | 244 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 34, 276 |
Conread position: | 1-313 |
Cow position: | chr16:24881581-24881912 (view UCSC Genome Browser custom track) |
Alignm length: | 336 |
Alignm identity: | 249 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 28, 281 |
Conread position: | 1-336 |
Cow position: | chr16:43898162-43898513 (view UCSC Genome Browser custom track) |
Alignm length: | 362 |
Alignm identity: | 261 |
Alignm E-value: | 3.00018e-42 |
Alignm gaps (pig, cow): | 34, 140 |
Conread position: | 1-401 |
Cow position: | chr16:15565857-15565444 (view UCSC Genome Browser custom track) |
Alignm length: | 425 |
Alignm identity: | 293 |
Alignm E-value: | 1.00053e-42 |
Alignm gaps (pig, cow): | 34, 273 |
Conread position: | 1-407 |
Cow position: | chr16:54647433-54647030 (view UCSC Genome Browser custom track) |
Alignm length: | 421 |
Alignm identity: | 293 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 44, 115 |
Conread position: | 1-413 |
Cow position: | chr16:14422821-14422415 (view UCSC Genome Browser custom track) |
Alignm length: | 432 |
Alignm identity: | 284 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 44, 146 |
Conread position: | 1-426 |
Cow position: | chr16:16687976-16687536 (view UCSC Genome Browser custom track) |
Alignm length: | 448 |
Alignm identity: | 318 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 43, 162 |
Conread position: | 1-447 |
Cow position: | chr16:6942729-6942234 (view UCSC Genome Browser custom track) |
Alignm length: | 497 |
Alignm identity: | 334 |
Alignm E-value: | 5e-36 |
Alignm gaps (pig, cow): | 43, 356 |
Conread position: | 1-449 |
Cow position: | chr16:15183910-15183448 (view UCSC Genome Browser custom track) |
Alignm length: | 477 |
Alignm identity: | 338 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 51, 17 |
Conread position: | 1-450 |
Cow position: | chr16:2728206-2728673 (view UCSC Genome Browser custom track) |
Alignm length: | 478 |
Alignm identity: | 339 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 41, 276 |
Conread position: | 1-489 |
Cow position: | chr16:12538818-12539327 (view UCSC Genome Browser custom track) |
Alignm length: | 518 |
Alignm identity: | 372 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 43, 272 |
Conread position: | 1-504 |
Cow position: | chr16:10204307-10204833 (view UCSC Genome Browser custom track) |
Alignm length: | 536 |
Alignm identity: | 374 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 28, 276 |
Conread position: | 1-529 |
Cow position: | chr16:5660967-5660400 (view UCSC Genome Browser custom track) |
Alignm length: | 570 |
Alignm identity: | 387 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 33, 110 |
Conread position: | 1-539 |
Cow position: | chr16:10437361-10436833 (view UCSC Genome Browser custom track) |
Alignm length: | 558 |
Alignm identity: | 374 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 19, 206 |
Conread position: | 1-539 |
Cow position: | chr16:28471989-28472546 (view UCSC Genome Browser custom track) |
Alignm length: | 574 |
Alignm identity: | 399 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 43, 275 |
Conread position: | 1-556 |
Cow position: | chr16:20255204-20255761 (view UCSC Genome Browser custom track) |
Alignm length: | 575 |
Alignm identity: | 413 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 43, 202 |
Conread position: | 1-557 |
Cow position: | chr16:29676199-29676760 (view UCSC Genome Browser custom track) |
Alignm length: | 577 |
Alignm identity: | 418 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 36, 207 |
Conread position: | 1-559 |
Cow position: | chr16:7676590-7677164 (view UCSC Genome Browser custom track) |
Alignm length: | 594 |
Alignm identity: | 411 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 43, 17 |
Conread position: | 1-559 |
Cow position: | chr16:8816998-8817575 (view UCSC Genome Browser custom track) |
Alignm length: | 591 |
Alignm identity: | 412 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 34, 274 |
Conread position: | 1-559 |
Cow position: | chr16:9777238-9776666 (view UCSC Genome Browser custom track) |
Alignm length: | 587 |
Alignm identity: | 414 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 36, 269 |
Conread position: | 1-559 |
Cow position: | chr16:25440725-25440144 (view UCSC Genome Browser custom track) |
Alignm length: | 594 |
Alignm identity: | 405 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 34, 23 |
Conread position: | 1-559 |
Cow position: | chr16:25458364-25458946 (view UCSC Genome Browser custom track) |
Alignm length: | 594 |
Alignm identity: | 405 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 34, 23 |
Conread position: | 1-591 |
Cow position: | chr16:18688022-18688629 (view UCSC Genome Browser custom track) |
Alignm length: | 618 |
Alignm identity: | 445 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 34, 81 |
Conread position: | 1-595 |
Cow position: | chr16:1430334-1429707 (view UCSC Genome Browser custom track) |
Alignm length: | 632 |
Alignm identity: | 445 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 43, 301 |
Conread position: | 2-275 |
Cow position: | chr16:23253398-23253688 (view UCSC Genome Browser custom track) |
Alignm length: | 297 |
Alignm identity: | 213 |
Alignm E-value: | 3e-32 |
Alignm gaps (pig, cow): | 33, 74 |
Conread position: | 2-446 |
Cow position: | chr16:32935247-32934785 (view UCSC Genome Browser custom track) |
Alignm length: | 472 |
Alignm identity: | 338 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 34, 95 |
Conread position: | 2-464 |
Cow position: | chr16:25341076-25340581 (view UCSC Genome Browser custom track) |
Alignm length: | 500 |
Alignm identity: | 347 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 33, 10 |
Conread position: | 2-547 |
Cow position: | chr16:29046126-29045572 (view UCSC Genome Browser custom track) |
Alignm length: | 573 |
Alignm identity: | 393 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 33, 95 |
Conread position: | 2-559 |
Cow position: | chr16:40297070-40297643 (view UCSC Genome Browser custom track) |
Alignm length: | 590 |
Alignm identity: | 412 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 39, 273 |
Conread position: | 2-592 |
Cow position: | chr16:10376165-10376795 (view UCSC Genome Browser custom track) |
Alignm length: | 633 |
Alignm identity: | 423 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 107 |
Conread position: | 3-428 |
Cow position: | chr16:407927-408366 (view UCSC Genome Browser custom track) |
Alignm length: | 452 |
Alignm identity: | 323 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 38, 274 |
Conread position: | 3-559 |
Cow position: | chr16:1568348-1568917 (view UCSC Genome Browser custom track) |
Alignm length: | 587 |
Alignm identity: | 399 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 29, 157 |
Conread position: | 4-217 |
Cow position: | chr16:49257464-49257697 (view UCSC Genome Browser custom track) |
Alignm length: | 234 |
Alignm identity: | 174 |
Alignm E-value: | 9e-31 |
Alignm gaps (pig, cow): | 41, 0 |
Conread position: | 4-426 |
Cow position: | chr16:2484034-2484471 (view UCSC Genome Browser custom track) |
Alignm length: | 449 |
Alignm identity: | 324 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 31, 8 |
Conread position: | 4-462 |
Cow position: | chr16:25084726-25084248 (view UCSC Genome Browser custom track) |
Alignm length: | 486 |
Alignm identity: | 355 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 38, 163 |
Conread position: | 6-452 |
Cow position: | chr16:36232502-36232962 (view UCSC Genome Browser custom track) |
Alignm length: | 468 |
Alignm identity: | 342 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 6, 101 |
Conread position: | 6-558 |
Cow position: | chr16:19713746-19714300 (view UCSC Genome Browser custom track) |
Alignm length: | 575 |
Alignm identity: | 420 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 36, 201 |
Conread position: | 7-299 |
Cow position: | chr16:9929656-9929345 (view UCSC Genome Browser custom track) |
Alignm length: | 317 |
Alignm identity: | 222 |
Alignm E-value: | 3e-30 |
Alignm gaps (pig, cow): | 30, 9 |
Conread position: | 7-449 |
Cow position: | chr16:49236014-49236472 (view UCSC Genome Browser custom track) |
Alignm length: | 467 |
Alignm identity: | 343 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 37, 154 |
Conread position: | 8-290 |
Cow position: | chr16:25157117-25157417 (view UCSC Genome Browser custom track) |
Alignm length: | 303 |
Alignm identity: | 234 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 27, 175 |
Conread position: | 8-448 |
Cow position: | chr16:16029859-16029421 (view UCSC Genome Browser custom track) |
Alignm length: | 454 |
Alignm identity: | 293 |
Alignm E-value: | 1e-32 |
Alignm gaps (pig, cow): | 36, 69 |
Conread position: | 8-462 |
Cow position: | chr16:36282498-36282051 (view UCSC Genome Browser custom track) |
Alignm length: | 475 |
Alignm identity: | 332 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 36, 173 |
Conread position: | 8-556 |
Cow position: | chr16:7905742-7905203 (view UCSC Genome Browser custom track) |
Alignm length: | 567 |
Alignm identity: | 402 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 25, 200 |
Conread position: | 12-388 |
Cow position: | chr16:42051259-42051643 (view UCSC Genome Browser custom track) |
Alignm length: | 392 |
Alignm identity: | 276 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 33, 80 |
Conread position: | 31-448 |
Cow position: | chr16:51685514-51685096 (view UCSC Genome Browser custom track) |
Alignm length: | 431 |
Alignm identity: | 288 |
Alignm E-value: | 8e-40 |
Alignm gaps (pig, cow): | 13, 39 |
Conread position: | 31-555 |
Cow position: | chr16:11052243-11051735 (view UCSC Genome Browser custom track) |
Alignm length: | 536 |
Alignm identity: | 386 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 12, 169 |
Conread position: | 42-186 |
Cow position: | chr16:5483265-5483414 (view UCSC Genome Browser custom track) |
Alignm length: | 150 |
Alignm identity: | 115 |
Alignm E-value: | 5e-25 |
Alignm gaps (pig, cow): | 57, 0 |
Conread position: | 42-513 |
Cow position: | chr16:39818685-39818213 (view UCSC Genome Browser custom track) |
Alignm length: | 488 |
Alignm identity: | 360 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 50, 160 |
Conread position: | 42-559 |
Cow position: | chr16:14666729-14667262 (view UCSC Genome Browser custom track) |
Alignm length: | 548 |
Alignm identity: | 378 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 236 |
Conread position: | 42-575 |
Cow position: | chr16:29031975-29031434 (view UCSC Genome Browser custom track) |
Alignm length: | 552 |
Alignm identity: | 424 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 50, 142 |
Conread position: | 46-189 |
Cow position: | chr16:52815570-52815710 (view UCSC Genome Browser custom track) |
Alignm length: | 145 |
Alignm identity: | 110 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 134, 44 |
Conread position: | 47-277 |
Cow position: | chr16:2239677-2239920 (view UCSC Genome Browser custom track) |
Alignm length: | 245 |
Alignm identity: | 177 |
Alignm E-value: | 8e-30 |
Alignm gaps (pig, cow): | 52, 11 |
Conread position: | 69-449 |
Cow position: | chr16:334997-334632 (view UCSC Genome Browser custom track) |
Alignm length: | 388 |
Alignm identity: | 267 |
Alignm E-value: | 6e-37 |
Alignm gaps (pig, cow): | 43, 14 |
Conread position: | 83-428 |
Cow position: | chr16:51083583-51083234 (view UCSC Genome Browser custom track) |
Alignm length: | 357 |
Alignm identity: | 257 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 23, 31 |
Conread position: | 115-559 |
Cow position: | chr16:2412037-2412484 (view UCSC Genome Browser custom track) |
Alignm length: | 463 |
Alignm identity: | 318 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 66, 54 |
Conread position: | 125-473 |
Cow position: | chr16:37446383-37446725 (view UCSC Genome Browser custom track) |
Alignm length: | 361 |
Alignm identity: | 255 |
Alignm E-value: | 3e-40 |
Alignm gaps (pig, cow): | 55, 132 |
Conread position: | 181-489 |
Cow position: | chr16:26661589-26661272 (view UCSC Genome Browser custom track) |
Alignm length: | 330 |
Alignm identity: | 226 |
Alignm E-value: | 6e-27 |
Alignm gaps (pig, cow): | 15, 98 |
Conread position: | 181-559 |
Cow position: | chr16:27735120-27735502 (view UCSC Genome Browser custom track) |
Alignm length: | 396 |
Alignm identity: | 259 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 15, 98 |
Conread position: | 181-593 |
Cow position: | chr16:49257679-49258096 (view UCSC Genome Browser custom track) |
Alignm length: | 424 |
Alignm identity: | 315 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 15, 196 |
Conread position: | 186-449 |
Cow position: | chr16:49955611-49955866 (view UCSC Genome Browser custom track) |
Alignm length: | 269 |
Alignm identity: | 195 |
Alignm E-value: | 5e-36 |
Alignm gaps (pig, cow): | 10, 54 |
Conread position: | 191-538 |
Cow position: | chr16:23982076-23981732 (view UCSC Genome Browser custom track) |
Alignm length: | 358 |
Alignm identity: | 239 |
Alignm E-value: | 1e-31 |
Alignm gaps (pig, cow): | 13, 81 |
Conread position: | 192-449 |
Cow position: | chr16:44673907-44673642 (view UCSC Genome Browser custom track) |
Alignm length: | 267 |
Alignm identity: | 188 |
Alignm E-value: | 5e-36 |
Alignm gaps (pig, cow): | 26, 197 |
Conread position: | 202-593 |
Cow position: | chr16:34527641-34527242 (view UCSC Genome Browser custom track) |
Alignm length: | 405 |
Alignm identity: | 276 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 29, 17 |
Conread position: | 215-413 |
Cow position: | chr16:12302576-12302778 (view UCSC Genome Browser custom track) |
Alignm length: | 204 |
Alignm identity: | 145 |
Alignm E-value: | 6e-27 |
Alignm gaps (pig, cow): | 98, 156 |
Conread position: | 229-593 |
Cow position: | chr16:2240180-2240555 (view UCSC Genome Browser custom track) |
Alignm length: | 377 |
Alignm identity: | 253 |
Alignm E-value: | 9.00054e-42 |
Alignm gaps (pig, cow): | 7, 142 |
Conread position: | 234-448 |
Cow position: | chr16:25152690-25152480 (view UCSC Genome Browser custom track) |
Alignm length: | 221 |
Alignm identity: | 158 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 10, 26 |
Conread position: | 235-591 |
Cow position: | chr16:15369141-15368785 (view UCSC Genome Browser custom track) |
Alignm length: | 364 |
Alignm identity: | 266 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 27, 113 |
Conread position: | 247-445 |
Cow position: | chr16:5888309-5888110 (view UCSC Genome Browser custom track) |
Alignm length: | 202 |
Alignm identity: | 149 |
Alignm E-value: | 1e-32 |
Alignm gaps (pig, cow): | 66, 141 |
Conread position: | 259-593 |
Cow position: | chr16:31565-31225 (view UCSC Genome Browser custom track) |
Alignm length: | 344 |
Alignm identity: | 232 |
Alignm E-value: | 2e-39 |
Alignm gaps (pig, cow): | 55, 108 |
Conread position: | 270-448 |
Cow position: | chr16:44388703-44388887 (view UCSC Genome Browser custom track) |
Alignm length: | 185 |
Alignm identity: | 129 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 8, 0 |
Conread position: | 271-593 |
Cow position: | chr16:4305481-4305809 (view UCSC Genome Browser custom track) |
Alignm length: | 330 |
Alignm identity: | 219 |
Alignm E-value: | 1e-35 |
Alignm gaps (pig, cow): | 41, 92 |
Conread position: | 271-593 |
Cow position: | chr16:28171570-28171901 (view UCSC Genome Browser custom track) |
Alignm length: | 333 |
Alignm identity: | 217 |
Alignm E-value: | 9e-31 |
Alignm gaps (pig, cow): | 43, 96 |
Conread position: | 277-591 |
Cow position: | chr16:28233846-28234156 (view UCSC Genome Browser custom track) |
Alignm length: | 324 |
Alignm identity: | 245 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 35, 61 |
Conread position: | 279-583 |
Cow position: | chr16:11744008-11744327 (view UCSC Genome Browser custom track) |
Alignm length: | 321 |
Alignm identity: | 212 |
Alignm E-value: | 6e-27 |
Alignm gaps (pig, cow): | 33, 84 |
Conread position: | 337-538 |
Cow position: | chr16:42740952-42741149 (view UCSC Genome Browser custom track) |
Alignm length: | 204 |
Alignm identity: | 147 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 107, 31 |
Conread position: | 387-591 |
Cow position: | chr16:23807094-23806893 (view UCSC Genome Browser custom track) |
Alignm length: | 208 |
Alignm identity: | 150 |
Alignm E-value: | 6e-28 |
Alignm gaps (pig, cow): | 114, 37 |
Show alignments to all cow chromosomes.