Cow genome map

Conread name: Lym2-sn39_F12.f

Conread position: 1-206
Cow position:
Alignm length: 213
Alignm identity: 159
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 34, 93

Conread position: 1-228
Cow position:
Alignm length: 241
Alignm identity: 171
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 43, 0

Conread position: 1-246
Cow position:
Alignm length: 262
Alignm identity: 202
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 28, 242

Conread position: 1-275
Cow position:
Alignm length: 298
Alignm identity: 216
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 43, 292

Conread position: 1-275
Cow position:
Alignm length: 299
Alignm identity: 216
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 43, 293

Conread position: 1-275
Cow position:
Alignm length: 296
Alignm identity: 209
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 30, 61

Conread position: 1-275
Cow position:
Alignm length: 292
Alignm identity: 208
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 43, 286

Conread position: 1-275
Cow position:
Alignm length: 298
Alignm identity: 210
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 43, 292

Conread position: 1-275
Cow position:
Alignm length: 298
Alignm identity: 217
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 43, 292

Conread position: 1-286
Cow position:
Alignm length: 305
Alignm identity: 223
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 43, 288

Conread position: 1-387
Cow position:
Alignm length: 409
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 290

Conread position: 1-443
Cow position:
Alignm length: 459
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 102

Conread position: 1-444
Cow position:
Alignm length: 463
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 275

Conread position: 1-444
Cow position:
Alignm length: 464
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 17

Conread position: 1-449
Cow position:
Alignm length: 473
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 21

Conread position: 1-449
Cow position:
Alignm length: 469
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 25

Conread position: 1-489
Cow position:
Alignm length: 521
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 161

Conread position: 1-538
Cow position:
Alignm length: 576
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 275

Conread position: 1-538
Cow position:
Alignm length: 566
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 165

Conread position: 1-539
Cow position:
Alignm length: 582
Alignm identity: 391
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 43, 17

Conread position: 1-539
Cow position:
Alignm length: 573
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 85

Conread position: 1-556
Cow position:
Alignm length: 574
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 82

Conread position: 1-556
Cow position:
Alignm length: 569
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 94

Conread position: 1-558
Cow position:
Alignm length: 575
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 205

Conread position: 1-558
Cow position:
Alignm length: 580
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 209

Conread position: 1-593
Cow position:
Alignm length: 638
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 110

Conread position: 1-593
Cow position:
Alignm length: 614
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 194

Conread position: 1-593
Cow position:
Alignm length: 634
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 110

Conread position: 2-173
Cow position:
Alignm length: 180
Alignm identity: 128
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 42, 162

Conread position: 2-219
Cow position:
Alignm length: 239
Alignm identity: 176
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 10, 186

Conread position: 2-275
Cow position:
Alignm length: 297
Alignm identity: 207
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 50, 291

Conread position: 2-539
Cow position:
Alignm length: 573
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 204

Conread position: 2-586
Cow position:
Alignm length: 641
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 360

Conread position: 3-449
Cow position:
Alignm length: 486
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 143

Conread position: 3-456
Cow position:
Alignm length: 478
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 267

Conread position: 3-597
Cow position:
Alignm length: 623
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 300

Conread position: 4-268
Cow position:
Alignm length: 288
Alignm identity: 204
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 40, 8

Conread position: 4-556
Cow position:
Alignm length: 568
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 162

Conread position: 4-591
Cow position:
Alignm length: 610
Alignm identity: 444
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 201

Conread position: 5-268
Cow position:
Alignm length: 280
Alignm identity: 203
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 40, 0

Conread position: 6-446
Cow position:
Alignm length: 469
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 266

Conread position: 6-446
Cow position:
Alignm length: 468
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 259

Conread position: 6-556
Cow position:
Alignm length: 577
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 184

Conread position: 6-558
Cow position:
Alignm length: 577
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 140

Conread position: 7-451
Cow position:
Alignm length: 466
Alignm identity: 313
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 26, 203

Conread position: 7-556
Cow position:
Alignm length: 564
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 66

Conread position: 7-593
Cow position:
Alignm length: 618
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 218

Conread position: 9-451
Cow position:
Alignm length: 466
Alignm identity: 305
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 31, 103

Conread position: 10-246
Cow position:
Alignm length: 244
Alignm identity: 169
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 34, 199

Conread position: 31-440
Cow position:
Alignm length: 425
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 171

Conread position: 31-558
Cow position:
Alignm length: 544
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 36

Conread position: 42-286
Cow position:
Alignm length: 261
Alignm identity: 188
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 62, 244

Conread position: 42-335
Cow position:
Alignm length: 303
Alignm identity: 228
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 65, 161

Conread position: 43-440
Cow position:
Alignm length: 412
Alignm identity: 270
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 47, 74

Conread position: 43-444
Cow position:
Alignm length: 423
Alignm identity: 296
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 44, 96

Conread position: 56-587
Cow position:
Alignm length: 570
Alignm identity: 372
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 91, 48

Conread position: 57-553
Cow position:
Alignm length: 508
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 160

Conread position: 62-555
Cow position:
Alignm length: 503
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 21

Conread position: 83-449
Cow position:
Alignm length: 381
Alignm identity: 251
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 20, 62

Conread position: 98-193
Cow position:
Alignm length: 97
Alignm identity: 85
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 82, 0

Conread position: 151-593
Cow position:
Alignm length: 450
Alignm identity: 284
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 161, 34

Conread position: 170-476
Cow position:
Alignm length: 324
Alignm identity: 221
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 12, 26

Conread position: 185-449
Cow position:
Alignm length: 268
Alignm identity: 195
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 133, 25

Conread position: 188-422
Cow position:
Alignm length: 244
Alignm identity: 176
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 30, 56

Conread position: 190-448
Cow position:
Alignm length: 273
Alignm identity: 188
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 24, 83

Conread position: 217-593
Cow position:
Alignm length: 392
Alignm identity: 262
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 7, 157

Conread position: 220-558
Cow position:
Alignm length: 346
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 154

Conread position: 229-593
Cow position:
Alignm length: 380
Alignm identity: 251
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 10, 22

Conread position: 237-550
Cow position:
Alignm length: 320
Alignm identity: 212
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 85, 33

Conread position: 256-583
Cow position:
Alignm length: 335
Alignm identity: 228
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 66, 106

Conread position: 260-586
Cow position:
Alignm length: 341
Alignm identity: 230
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 54, 7

Conread position: 267-587
Cow position:
Alignm length: 328
Alignm identity: 225
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 47, 100

Conread position: 271-447
Cow position:
Alignm length: 180
Alignm identity: 130
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 43, 96

Conread position: 279-556
Cow position:
Alignm length: 285
Alignm identity: 197
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 16, 59

Conread position: 322-440
Cow position:
Alignm length: 119
Alignm identity: 91
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.