Cow genome map

Conread name: Lym2-sn39_F12.f

Conread position: 1-191
Cow position:
Alignm length: 205
Alignm identity: 159
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 43, 0

Conread position: 1-194
Cow position:
Alignm length: 203
Alignm identity: 158
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 43, 82

Conread position: 1-220
Cow position:
Alignm length: 245
Alignm identity: 183
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 43, 25

Conread position: 1-223
Cow position:
Alignm length: 243
Alignm identity: 170
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 43, 224

Conread position: 1-286
Cow position:
Alignm length: 311
Alignm identity: 223
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 40, 32

Conread position: 1-286
Cow position:
Alignm length: 305
Alignm identity: 217
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 31, 288

Conread position: 1-286
Cow position:
Alignm length: 299
Alignm identity: 211
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 43, 187

Conread position: 1-425
Cow position:
Alignm length: 450
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 240

Conread position: 1-426
Cow position:
Alignm length: 452
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 276

Conread position: 1-427
Cow position:
Alignm length: 442
Alignm identity: 307
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 43, 86

Conread position: 1-441
Cow position:
Alignm length: 465
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 287

Conread position: 1-442
Cow position:
Alignm length: 467
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 162

Conread position: 1-444
Cow position:
Alignm length: 466
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 285

Conread position: 1-505
Cow position:
Alignm length: 524
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 176

Conread position: 1-554
Cow position:
Alignm length: 582
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 155

Conread position: 1-554
Cow position:
Alignm length: 572
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 200

Conread position: 1-556
Cow position:
Alignm length: 590
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 72

Conread position: 1-558
Cow position:
Alignm length: 579
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 12

Conread position: 1-578
Cow position:
Alignm length: 619
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 68

Conread position: 1-585
Cow position:
Alignm length: 615
Alignm identity: 453
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 64

Conread position: 1-588
Cow position:
Alignm length: 620
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 276

Conread position: 1-593
Cow position:
Alignm length: 646
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 109

Conread position: 1-593
Cow position:
Alignm length: 643
Alignm identity: 411
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 43, 406

Conread position: 1-593
Cow position:
Alignm length: 632
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 93

Conread position: 2-217
Cow position:
Alignm length: 233
Alignm identity: 166
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 33, 0

Conread position: 2-285
Cow position:
Alignm length: 301
Alignm identity: 216
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 33, 107

Conread position: 2-548
Cow position:
Alignm length: 569
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 242

Conread position: 3-440
Cow position:
Alignm length: 445
Alignm identity: 291
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 181, 49

Conread position: 3-559
Cow position:
Alignm length: 591
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 275

Conread position: 4-454
Cow position:
Alignm length: 469
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 79

Conread position: 4-502
Cow position:
Alignm length: 532
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 288

Conread position: 4-507
Cow position:
Alignm length: 528
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 385

Conread position: 6-193
Cow position:
Alignm length: 196
Alignm identity: 147
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 6, 42

Conread position: 6-432
Cow position:
Alignm length: 455
Alignm identity: 306
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 38, 20

Conread position: 6-449
Cow position:
Alignm length: 463
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 111

Conread position: 6-556
Cow position:
Alignm length: 571
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 190

Conread position: 10-426
Cow position:
Alignm length: 434
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 197

Conread position: 19-556
Cow position:
Alignm length: 557
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 136

Conread position: 31-539
Cow position:
Alignm length: 527
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 124

Conread position: 42-275
Cow position:
Alignm length: 245
Alignm identity: 177
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 142, 48

Conread position: 42-275
Cow position:
Alignm length: 250
Alignm identity: 180
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 37, 244

Conread position: 42-428
Cow position:
Alignm length: 401
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 222

Conread position: 42-442
Cow position:
Alignm length: 417
Alignm identity: 267
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 63, 202

Conread position: 42-558
Cow position:
Alignm length: 531
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 160

Conread position: 44-444
Cow position:
Alignm length: 414
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 96

Conread position: 49-449
Cow position:
Alignm length: 414
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 50

Conread position: 55-503
Cow position:
Alignm length: 483
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 316

Conread position: 63-310
Cow position:
Alignm length: 253
Alignm identity: 186
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 117, 25

Conread position: 67-511
Cow position:
Alignm length: 463
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 106

Conread position: 111-444
Cow position:
Alignm length: 344
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 265

Conread position: 130-320
Cow position:
Alignm length: 203
Alignm identity: 143
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 51, 73

Conread position: 159-597
Cow position:
Alignm length: 450
Alignm identity: 297
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 65, 52

Conread position: 166-539
Cow position:
Alignm length: 394
Alignm identity: 268
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 15, 98

Conread position: 200-478
Cow position:
Alignm length: 283
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 72

Conread position: 205-539
Cow position:
Alignm length: 341
Alignm identity: 231
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 13, 50

Conread position: 217-556
Cow position:
Alignm length: 358
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 166

Conread position: 235-554
Cow position:
Alignm length: 321
Alignm identity: 228
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 209, 35

Conread position: 271-485
Cow position:
Alignm length: 220
Alignm identity: 148
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 41, 96

Conread position: 271-587
Cow position:
Alignm length: 325
Alignm identity: 225
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 43, 93

Conread position: 271-593
Cow position:
Alignm length: 330
Alignm identity: 219
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 41, 15

Conread position: 275-591
Cow position:
Alignm length: 331
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 100

Conread position: 280-592
Cow position:
Alignm length: 320
Alignm identity: 216
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 34, 87

Conread position: 312-558
Cow position:
Alignm length: 248
Alignm identity: 182
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 132, 56

Conread position: 327-554
Cow position:
Alignm length: 233
Alignm identity: 163
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 117, 49

Conread position: 445-562
Cow position:
Alignm length: 121
Alignm identity: 94
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 71, 0

Show alignments to all cow chromosomes.