Cow genome map
| Conread name: | Lym2-sn39_F12.f |
| Conread position: | 1-191 |
| Cow position: | chr19:7488208-7488004 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 1-194 |
| Cow position: | chr19:39688439-39688238 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 158 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 43, 82 |
| Conread position: | 1-220 |
| Cow position: | chr19:30372177-30371934 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 183 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 43, 25 |
| Conread position: | 1-223 |
| Cow position: | chr19:170845-171086 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 43, 224 |
| Conread position: | 1-286 |
| Cow position: | chr19:548284-547976 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 223 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 40, 32 |
| Conread position: | 1-286 |
| Cow position: | chr19:7341963-7341661 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 217 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 31, 288 |
| Conread position: | 1-286 |
| Cow position: | chr19:28593172-28592879 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 211 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 43, 187 |
| Conread position: | 1-425 |
| Cow position: | chr19:4385380-4384933 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 240 |
| Conread position: | 1-426 |
| Cow position: | chr19:10672411-10672852 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 276 |
| Conread position: | 1-427 |
| Cow position: | chr19:39546523-39546126 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 307 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 43, 86 |
| Conread position: | 1-441 |
| Cow position: | chr19:33941507-33941057 (view UCSC Genome Browser custom track) |
| Alignm length: | 465 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 287 |
| Conread position: | 1-442 |
| Cow position: | chr19:416548-416104 (view UCSC Genome Browser custom track) |
| Alignm length: | 467 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 162 |
| Conread position: | 1-444 |
| Cow position: | chr19:55078641-55078186 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 285 |
| Conread position: | 1-505 |
| Cow position: | chr19:1032005-1031505 (view UCSC Genome Browser custom track) |
| Alignm length: | 524 |
| Alignm identity: | 368 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 176 |
| Conread position: | 1-554 |
| Cow position: | chr19:350670-351227 (view UCSC Genome Browser custom track) |
| Alignm length: | 582 |
| Alignm identity: | 410 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 155 |
| Conread position: | 1-554 |
| Cow position: | chr19:29209456-29208904 (view UCSC Genome Browser custom track) |
| Alignm length: | 572 |
| Alignm identity: | 414 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 200 |
| Conread position: | 1-556 |
| Cow position: | chr19:4532848-4533431 (view UCSC Genome Browser custom track) |
| Alignm length: | 590 |
| Alignm identity: | 404 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 72 |
| Conread position: | 1-558 |
| Cow position: | chr19:4252463-4253025 (view UCSC Genome Browser custom track) |
| Alignm length: | 579 |
| Alignm identity: | 422 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 12 |
| Conread position: | 1-578 |
| Cow position: | chr19:772494-771880 (view UCSC Genome Browser custom track) |
| Alignm length: | 619 |
| Alignm identity: | 403 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 68 |
| Conread position: | 1-585 |
| Cow position: | chr19:34319-33709 (view UCSC Genome Browser custom track) |
| Alignm length: | 615 |
| Alignm identity: | 453 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 64 |
| Conread position: | 1-588 |
| Cow position: | chr19:40852535-40853137 (view UCSC Genome Browser custom track) |
| Alignm length: | 620 |
| Alignm identity: | 432 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 276 |
| Conread position: | 1-593 |
| Cow position: | chr19:685739-685099 (view UCSC Genome Browser custom track) |
| Alignm length: | 646 |
| Alignm identity: | 427 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 109 |
| Conread position: | 1-593 |
| Cow position: | chr19:32193472-32192833 (view UCSC Genome Browser custom track) |
| Alignm length: | 643 |
| Alignm identity: | 411 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 43, 406 |
| Conread position: | 1-593 |
| Cow position: | chr19:52152366-52152993 (view UCSC Genome Browser custom track) |
| Alignm length: | 632 |
| Alignm identity: | 410 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 93 |
| Conread position: | 2-217 |
| Cow position: | chr19:32244574-32244342 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 166 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 2-285 |
| Cow position: | chr19:32212173-32212470 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 216 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 33, 107 |
| Conread position: | 2-548 |
| Cow position: | chr19:172105-171546 (view UCSC Genome Browser custom track) |
| Alignm length: | 569 |
| Alignm identity: | 382 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 242 |
| Conread position: | 3-440 |
| Cow position: | chr19:1492173-1492595 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 291 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 181, 49 |
| Conread position: | 3-559 |
| Cow position: | chr19:203857-203285 (view UCSC Genome Browser custom track) |
| Alignm length: | 591 |
| Alignm identity: | 401 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 275 |
| Conread position: | 4-454 |
| Cow position: | chr19:6553286-6552838 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 79 |
| Conread position: | 4-502 |
| Cow position: | chr19:261327-260804 (view UCSC Genome Browser custom track) |
| Alignm length: | 532 |
| Alignm identity: | 379 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 288 |
| Conread position: | 4-507 |
| Cow position: | chr19:76343-76862 (view UCSC Genome Browser custom track) |
| Alignm length: | 528 |
| Alignm identity: | 383 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 385 |
| Conread position: | 6-193 |
| Cow position: | chr19:31341600-31341413 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 147 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 6, 42 |
| Conread position: | 6-432 |
| Cow position: | chr19:35376447-35376016 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 306 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 38, 20 |
| Conread position: | 6-449 |
| Cow position: | chr19:36477246-36476793 (view UCSC Genome Browser custom track) |
| Alignm length: | 463 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 111 |
| Conread position: | 6-556 |
| Cow position: | chr19:32665423-32664889 (view UCSC Genome Browser custom track) |
| Alignm length: | 571 |
| Alignm identity: | 398 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 190 |
| Conread position: | 10-426 |
| Cow position: | chr19:439760-440178 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 197 |
| Conread position: | 19-556 |
| Cow position: | chr19:32237987-32238509 (view UCSC Genome Browser custom track) |
| Alignm length: | 557 |
| Alignm identity: | 396 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 136 |
| Conread position: | 31-539 |
| Cow position: | chr19:39390380-39389873 (view UCSC Genome Browser custom track) |
| Alignm length: | 527 |
| Alignm identity: | 372 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 124 |
| Conread position: | 42-275 |
| Cow position: | chr19:37747-37506 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 177 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 142, 48 |
| Conread position: | 42-275 |
| Cow position: | chr19:43143566-43143318 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 180 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 37, 244 |
| Conread position: | 42-428 |
| Cow position: | chr19:33873086-33872696 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 222 |
| Conread position: | 42-442 |
| Cow position: | chr19:35979116-35978710 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 267 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 63, 202 |
| Conread position: | 42-558 |
| Cow position: | chr19:801838-801326 (view UCSC Genome Browser custom track) |
| Alignm length: | 531 |
| Alignm identity: | 384 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 160 |
| Conread position: | 44-444 |
| Cow position: | chr19:40887803-40888197 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 96 |
| Conread position: | 49-449 |
| Cow position: | chr19:32223588-32223987 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 133, 50 |
| Conread position: | 55-503 |
| Cow position: | chr19:544056-544535 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 316 |
| Conread position: | 63-310 |
| Cow position: | chr19:378067-378313 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 186 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 117, 25 |
| Conread position: | 67-511 |
| Cow position: | chr19:27053012-27053466 (view UCSC Genome Browser custom track) |
| Alignm length: | 463 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 106 |
| Conread position: | 111-444 |
| Cow position: | chr19:561931-562270 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 265 |
| Conread position: | 130-320 |
| Cow position: | chr19:8229295-8229496 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 51, 73 |
| Conread position: | 159-597 |
| Cow position: | chr19:37590-37149 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 297 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 65, 52 |
| Conread position: | 166-539 |
| Cow position: | chr19:893843-894223 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 268 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 15, 98 |
| Conread position: | 200-478 |
| Cow position: | chr19:352963-353240 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 209 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 72 |
| Conread position: | 205-539 |
| Cow position: | chr19:7487730-7487403 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 231 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 13, 50 |
| Conread position: | 217-556 |
| Cow position: | chr19:24748627-24748275 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 166 |
| Conread position: | 235-554 |
| Cow position: | chr19:30371696-30371396 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 228 |
| Alignm E-value: | 9.00054e-42 |
| Alignm gaps (pig, cow): | 209, 35 |
| Conread position: | 271-485 |
| Cow position: | chr19:32244250-32244032 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 41, 96 |
| Conread position: | 271-587 |
| Cow position: | chr19:7341650-7341333 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 225 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 43, 93 |
| Conread position: | 271-593 |
| Cow position: | chr19:43143297-43142970 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 219 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 41, 15 |
| Conread position: | 275-591 |
| Cow position: | chr19:39687624-39687302 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 100 |
| Conread position: | 280-592 |
| Cow position: | chr19:32212491-32212809 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 216 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 34, 87 |
| Conread position: | 312-558 |
| Cow position: | chr19:31340442-31340199 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 182 |
| Alignm E-value: | 9.00054e-42 |
| Alignm gaps (pig, cow): | 132, 56 |
| Conread position: | 327-554 |
| Cow position: | chr19:378892-379121 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 163 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 117, 49 |
| Conread position: | 445-562 |
| Cow position: | chr19:19179547-19179427 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 94 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 71, 0 |
Show alignments to all cow chromosomes.