Cow genome map

Conread name: Lym2-sn39_F12.f

Conread position: 1-173
Cow position:
Alignm length: 186
Alignm identity: 143
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 39, 62

Conread position: 1-192
Cow position:
Alignm length: 215
Alignm identity: 163
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 43, 0

Conread position: 1-193
Cow position:
Alignm length: 201
Alignm identity: 148
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 46, 109

Conread position: 1-193
Cow position:
Alignm length: 207
Alignm identity: 151
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 36, 193

Conread position: 1-206
Cow position:
Alignm length: 220
Alignm identity: 164
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 43, 200

Conread position: 1-214
Cow position:
Alignm length: 231
Alignm identity: 173
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 43, 0

Conread position: 1-219
Cow position:
Alignm length: 235
Alignm identity: 183
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 34, 0

Conread position: 1-219
Cow position:
Alignm length: 238
Alignm identity: 176
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 43, 17

Conread position: 1-222
Cow position:
Alignm length: 236
Alignm identity: 186
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 43, 206

Conread position: 1-223
Cow position:
Alignm length: 240
Alignm identity: 186
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 40, 0

Conread position: 1-230
Cow position:
Alignm length: 231
Alignm identity: 159
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 179, 53

Conread position: 1-239
Cow position:
Alignm length: 260
Alignm identity: 191
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 34, 11

Conread position: 1-261
Cow position:
Alignm length: 284
Alignm identity: 203
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 30, 0

Conread position: 1-269
Cow position:
Alignm length: 292
Alignm identity: 208
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 43, 228

Conread position: 1-275
Cow position:
Alignm length: 293
Alignm identity: 214
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 43, 181

Conread position: 1-275
Cow position:
Alignm length: 300
Alignm identity: 212
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 20, 294

Conread position: 1-275
Cow position:
Alignm length: 294
Alignm identity: 207
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 43, 288

Conread position: 1-275
Cow position:
Alignm length: 298
Alignm identity: 214
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 44, 292

Conread position: 1-275
Cow position:
Alignm length: 297
Alignm identity: 213
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 43, 291

Conread position: 1-275
Cow position:
Alignm length: 298
Alignm identity: 213
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 43, 292

Conread position: 1-286
Cow position:
Alignm length: 307
Alignm identity: 220
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 43, 290

Conread position: 1-332
Cow position:
Alignm length: 348
Alignm identity: 154
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 43, 176

Conread position: 1-335
Cow position:
Alignm length: 358
Alignm identity: 261
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 34, 86

Conread position: 1-362
Cow position:
Alignm length: 384
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 0

Conread position: 1-401
Cow position:
Alignm length: 427
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 289

Conread position: 1-411
Cow position:
Alignm length: 425
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 18

Conread position: 1-426
Cow position:
Alignm length: 438
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 84

Conread position: 1-426
Cow position:
Alignm length: 448
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 17

Conread position: 1-427
Cow position:
Alignm length: 447
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 25

Conread position: 1-440
Cow position:
Alignm length: 460
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 204

Conread position: 1-441
Cow position:
Alignm length: 463
Alignm identity: 304
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 43, 17

Conread position: 1-443
Cow position:
Alignm length: 476
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 240

Conread position: 1-443
Cow position:
Alignm length: 466
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 156

Conread position: 1-444
Cow position:
Alignm length: 467
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 85

Conread position: 1-446
Cow position:
Alignm length: 473
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 75

Conread position: 1-448
Cow position:
Alignm length: 471
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 164

Conread position: 1-449
Cow position:
Alignm length: 469
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 226

Conread position: 1-449
Cow position:
Alignm length: 469
Alignm identity: 301
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 29, 238

Conread position: 1-489
Cow position:
Alignm length: 522
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 182

Conread position: 1-504
Cow position:
Alignm length: 536
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 289

Conread position: 1-504
Cow position:
Alignm length: 525
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 23

Conread position: 1-504
Cow position:
Alignm length: 536
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 274

Conread position: 1-537
Cow position:
Alignm length: 581
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 19

Conread position: 1-538
Cow position:
Alignm length: 588
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 406

Conread position: 1-539
Cow position:
Alignm length: 569
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 288

Conread position: 1-546
Cow position:
Alignm length: 579
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 72

Conread position: 1-554
Cow position:
Alignm length: 570
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 37

Conread position: 1-556
Cow position:
Alignm length: 579
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 206

Conread position: 1-559
Cow position:
Alignm length: 593
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 290

Conread position: 1-563
Cow position:
Alignm length: 581
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 143

Conread position: 1-587
Cow position:
Alignm length: 630
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 93

Conread position: 1-587
Cow position:
Alignm length: 645
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 160

Conread position: 1-588
Cow position:
Alignm length: 612
Alignm identity: 470
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 242

Conread position: 1-588
Cow position:
Alignm length: 613
Alignm identity: 443
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 392

Conread position: 1-593
Cow position:
Alignm length: 615
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 280

Conread position: 1-593
Cow position:
Alignm length: 640
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 110

Conread position: 1-593
Cow position:
Alignm length: 608
Alignm identity: 445
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 105

Conread position: 1-593
Cow position:
Alignm length: 643
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 182

Conread position: 1-593
Cow position:
Alignm length: 633
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 172

Conread position: 2-268
Cow position:
Alignm length: 290
Alignm identity: 199
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 42, 0

Conread position: 2-275
Cow position:
Alignm length: 295
Alignm identity: 216
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 42, 289

Conread position: 2-284
Cow position:
Alignm length: 306
Alignm identity: 215
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 42, 291

Conread position: 2-441
Cow position:
Alignm length: 459
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 241

Conread position: 2-489
Cow position:
Alignm length: 521
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 274

Conread position: 2-538
Cow position:
Alignm length: 563
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 242

Conread position: 2-595
Cow position:
Alignm length: 621
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 120

Conread position: 3-478
Cow position:
Alignm length: 501
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 80

Conread position: 3-528
Cow position:
Alignm length: 561
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 128

Conread position: 3-558
Cow position:
Alignm length: 587
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 79

Conread position: 3-595
Cow position:
Alignm length: 625
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 161

Conread position: 4-411
Cow position:
Alignm length: 428
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 150

Conread position: 4-449
Cow position:
Alignm length: 475
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 23

Conread position: 4-475
Cow position:
Alignm length: 488
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 99

Conread position: 4-556
Cow position:
Alignm length: 577
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 5

Conread position: 4-559
Cow position:
Alignm length: 582
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 12

Conread position: 4-593
Cow position:
Alignm length: 627
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 20

Conread position: 6-219
Cow position:
Alignm length: 226
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 189

Conread position: 6-366
Cow position:
Alignm length: 383
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 203

Conread position: 6-432
Cow position:
Alignm length: 453
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 383

Conread position: 6-438
Cow position:
Alignm length: 459
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 10

Conread position: 6-556
Cow position:
Alignm length: 573
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 147

Conread position: 6-600
Cow position:
Alignm length: 613
Alignm identity: 461
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 60

Conread position: 7-364
Cow position:
Alignm length: 371
Alignm identity: 246
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 172, 39

Conread position: 7-445
Cow position:
Alignm length: 466
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 99

Conread position: 7-449
Cow position:
Alignm length: 463
Alignm identity: 315
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 27, 124

Conread position: 8-285
Cow position:
Alignm length: 296
Alignm identity: 211
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 36, 277

Conread position: 8-590
Cow position:
Alignm length: 612
Alignm identity: 457
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 86

Conread position: 11-556
Cow position:
Alignm length: 562
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 171

Conread position: 24-552
Cow position:
Alignm length: 540
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 175

Conread position: 31-222
Cow position:
Alignm length: 201
Alignm identity: 151
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 11, 188

Conread position: 31-559
Cow position:
Alignm length: 556
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 239

Conread position: 41-593
Cow position:
Alignm length: 591
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 352

Conread position: 42-267
Cow position:
Alignm length: 242
Alignm identity: 172
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 50, 0

Conread position: 42-275
Cow position:
Alignm length: 249
Alignm identity: 181
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 50, 243

Conread position: 42-279
Cow position:
Alignm length: 248
Alignm identity: 180
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 52, 238

Conread position: 42-441
Cow position:
Alignm length: 420
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 103

Conread position: 42-442
Cow position:
Alignm length: 421
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 14

Conread position: 42-555
Cow position:
Alignm length: 532
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 135

Conread position: 42-559
Cow position:
Alignm length: 550
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 242

Conread position: 42-591
Cow position:
Alignm length: 569
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 204

Conread position: 42-593
Cow position:
Alignm length: 570
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 15

Conread position: 43-449
Cow position:
Alignm length: 422
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 58

Conread position: 43-449
Cow position:
Alignm length: 412
Alignm identity: 279
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 30, 41

Conread position: 43-506
Cow position:
Alignm length: 484
Alignm identity: 315
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 36, 9

Conread position: 44-358
Cow position:
Alignm length: 324
Alignm identity: 232
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 48, 143

Conread position: 45-549
Cow position:
Alignm length: 528
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 8

Conread position: 46-449
Cow position:
Alignm length: 411
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 206

Conread position: 55-591
Cow position:
Alignm length: 563
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 332

Conread position: 57-556
Cow position:
Alignm length: 510
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 137

Conread position: 65-558
Cow position:
Alignm length: 519
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 290

Conread position: 79-581
Cow position:
Alignm length: 521
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 34

Conread position: 88-416
Cow position:
Alignm length: 335
Alignm identity: 218
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 108, 22

Conread position: 90-454
Cow position:
Alignm length: 372
Alignm identity: 253
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 90, 139

Conread position: 123-591
Cow position:
Alignm length: 489
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 9

Conread position: 150-444
Cow position:
Alignm length: 309
Alignm identity: 227
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 19, 14

Conread position: 159-593
Cow position:
Alignm length: 444
Alignm identity: 280
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 153, 26

Conread position: 170-550
Cow position:
Alignm length: 393
Alignm identity: 257
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 11, 62

Conread position: 196-495
Cow position:
Alignm length: 331
Alignm identity: 237
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 21, 208

Conread position: 196-556
Cow position:
Alignm length: 370
Alignm identity: 261
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 8, 22

Conread position: 204-590
Cow position:
Alignm length: 415
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 206-440
Cow position:
Alignm length: 244
Alignm identity: 171
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 31, 162

Conread position: 228-593
Cow position:
Alignm length: 376
Alignm identity: 238
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 32, 141

Conread position: 228-593
Cow position:
Alignm length: 377
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 143

Conread position: 229-593
Cow position:
Alignm length: 390
Alignm identity: 252
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 10, 69

Conread position: 229-593
Cow position:
Alignm length: 376
Alignm identity: 243
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 10, 142

Conread position: 235-414
Cow position:
Alignm length: 192
Alignm identity: 140
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 23, 138

Conread position: 239-425
Cow position:
Alignm length: 194
Alignm identity: 147
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 31, 136

Conread position: 251-539
Cow position:
Alignm length: 298
Alignm identity: 205
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 19, 123

Conread position: 254-593
Cow position:
Alignm length: 347
Alignm identity: 231
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 60, 113

Conread position: 266-593
Cow position:
Alignm length: 336
Alignm identity: 220
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 46, 5

Conread position: 267-593
Cow position:
Alignm length: 334
Alignm identity: 217
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 48, 5

Conread position: 271-587
Cow position:
Alignm length: 324
Alignm identity: 223
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 43, 93

Conread position: 271-592
Cow position:
Alignm length: 329
Alignm identity: 216
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 41, 96

Conread position: 271-593
Cow position:
Alignm length: 332
Alignm identity: 225
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 41, 96

Conread position: 271-593
Cow position:
Alignm length: 335
Alignm identity: 224
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 43, 96

Conread position: 271-593
Cow position:
Alignm length: 330
Alignm identity: 220
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 38, 96

Conread position: 271-593
Cow position:
Alignm length: 327
Alignm identity: 210
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 41, 82

Conread position: 273-569
Cow position:
Alignm length: 307
Alignm identity: 211
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 96, 9

Conread position: 275-556
Cow position:
Alignm length: 286
Alignm identity: 201
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 37, 7

Conread position: 278-425
Cow position:
Alignm length: 152
Alignm identity: 113
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 34, 0

Conread position: 278-595
Cow position:
Alignm length: 330
Alignm identity: 223
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 37, 59

Conread position: 280-592
Cow position:
Alignm length: 328
Alignm identity: 211
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 34, 255

Conread position: 306-556
Cow position:
Alignm length: 252
Alignm identity: 174
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 138, 62

Conread position: 329-556
Cow position:
Alignm length: 229
Alignm identity: 163
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 115, 39

Conread position: 335-558
Cow position:
Alignm length: 224
Alignm identity: 153
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 20, 0

Conread position: 352-546
Cow position:
Alignm length: 200
Alignm identity: 138
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 92, 22

Conread position: 407-587
Cow position:
Alignm length: 187
Alignm identity: 132
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 37, 116

Show alignments to all cow chromosomes.