Cow genome map

Conread name: Lym2-sn39_F12.f

Conread position: 1-177
Cow position:
Alignm length: 185
Alignm identity: 144
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 43, 0

Conread position: 1-183
Cow position:
Alignm length: 201
Alignm identity: 146
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 43, 0

Conread position: 1-197
Cow position:
Alignm length: 211
Alignm identity: 156
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 19, 0

Conread position: 1-198
Cow position:
Alignm length: 212
Alignm identity: 165
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 44, 0

Conread position: 1-229
Cow position:
Alignm length: 245
Alignm identity: 186
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 37, 149

Conread position: 1-230
Cow position:
Alignm length: 250
Alignm identity: 190
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 33, 19

Conread position: 1-252
Cow position:
Alignm length: 273
Alignm identity: 202
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 43, 0

Conread position: 1-268
Cow position:
Alignm length: 283
Alignm identity: 203
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 104, 51

Conread position: 1-268
Cow position:
Alignm length: 287
Alignm identity: 205
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 43, 0

Conread position: 1-268
Cow position:
Alignm length: 292
Alignm identity: 214
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 43, 0

Conread position: 1-275
Cow position:
Alignm length: 294
Alignm identity: 212
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 43, 77

Conread position: 1-275
Cow position:
Alignm length: 298
Alignm identity: 213
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 43, 292

Conread position: 1-286
Cow position:
Alignm length: 297
Alignm identity: 211
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 10, 90

Conread position: 1-286
Cow position:
Alignm length: 309
Alignm identity: 221
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 43, 292

Conread position: 1-290
Cow position:
Alignm length: 308
Alignm identity: 223
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 42, 154

Conread position: 1-418
Cow position:
Alignm length: 432
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 82

Conread position: 1-425
Cow position:
Alignm length: 450
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 274

Conread position: 1-428
Cow position:
Alignm length: 462
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 159

Conread position: 1-440
Cow position:
Alignm length: 449
Alignm identity: 290
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 42, 111

Conread position: 1-449
Cow position:
Alignm length: 473
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 276

Conread position: 1-449
Cow position:
Alignm length: 477
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 397

Conread position: 1-478
Cow position:
Alignm length: 518
Alignm identity: 350
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 43, 412

Conread position: 1-489
Cow position:
Alignm length: 520
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 11

Conread position: 1-504
Cow position:
Alignm length: 528
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 271

Conread position: 1-511
Cow position:
Alignm length: 539
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 349

Conread position: 1-539
Cow position:
Alignm length: 575
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 182

Conread position: 1-540
Cow position:
Alignm length: 572
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 275

Conread position: 1-558
Cow position:
Alignm length: 576
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 187

Conread position: 1-558
Cow position:
Alignm length: 576
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 212

Conread position: 1-559
Cow position:
Alignm length: 587
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 283

Conread position: 1-565
Cow position:
Alignm length: 589
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 207

Conread position: 1-591
Cow position:
Alignm length: 616
Alignm identity: 450
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 153

Conread position: 1-593
Cow position:
Alignm length: 614
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 158

Conread position: 1-593
Cow position:
Alignm length: 640
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 61

Conread position: 1-593
Cow position:
Alignm length: 646
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 0

Conread position: 2-268
Cow position:
Alignm length: 291
Alignm identity: 206
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 7, 0

Conread position: 2-275
Cow position:
Alignm length: 297
Alignm identity: 212
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 42, 291

Conread position: 2-286
Cow position:
Alignm length: 306
Alignm identity: 223
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 42, 289

Conread position: 2-425
Cow position:
Alignm length: 452
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 276

Conread position: 2-428
Cow position:
Alignm length: 454
Alignm identity: 308
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 38, 244

Conread position: 2-539
Cow position:
Alignm length: 568
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 272

Conread position: 2-593
Cow position:
Alignm length: 640
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 406

Conread position: 3-218
Cow position:
Alignm length: 233
Alignm identity: 176
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 31, 0

Conread position: 3-591
Cow position:
Alignm length: 619
Alignm identity: 454
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 17

Conread position: 3-593
Cow position:
Alignm length: 640
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 273

Conread position: 3-597
Cow position:
Alignm length: 652
Alignm identity: 427
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 38, 407

Conread position: 4-223
Cow position:
Alignm length: 235
Alignm identity: 171
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 36, 70

Conread position: 4-268
Cow position:
Alignm length: 288
Alignm identity: 200
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 40, 0

Conread position: 4-348
Cow position:
Alignm length: 376
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 153

Conread position: 4-407
Cow position:
Alignm length: 420
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 8

Conread position: 4-595
Cow position:
Alignm length: 606
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 176, 9

Conread position: 4-597
Cow position:
Alignm length: 623
Alignm identity: 445
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 23

Conread position: 6-343
Cow position:
Alignm length: 358
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 202

Conread position: 6-553
Cow position:
Alignm length: 565
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 178

Conread position: 6-556
Cow position:
Alignm length: 569
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 201

Conread position: 6-556
Cow position:
Alignm length: 569
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 198

Conread position: 8-313
Cow position:
Alignm length: 319
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 91

Conread position: 8-586
Cow position:
Alignm length: 601
Alignm identity: 395
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 18, 157

Conread position: 8-599
Cow position:
Alignm length: 622
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 72

Conread position: 9-594
Cow position:
Alignm length: 609
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 235

Conread position: 10-444
Cow position:
Alignm length: 449
Alignm identity: 298
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 34, 19

Conread position: 11-286
Cow position:
Alignm length: 295
Alignm identity: 212
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 33, 278

Conread position: 31-444
Cow position:
Alignm length: 434
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 253

Conread position: 42-316
Cow position:
Alignm length: 285
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 7

Conread position: 42-424
Cow position:
Alignm length: 402
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 84

Conread position: 43-593
Cow position:
Alignm length: 585
Alignm identity: 342
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 128, 346

Conread position: 46-194
Cow position:
Alignm length: 150
Alignm identity: 111
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 134, 78

Conread position: 46-434
Cow position:
Alignm length: 402
Alignm identity: 262
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 45, 197

Conread position: 58-579
Cow position:
Alignm length: 558
Alignm identity: 365
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 34, 63

Conread position: 60-556
Cow position:
Alignm length: 508
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 139

Conread position: 64-593
Cow position:
Alignm length: 543
Alignm identity: 341
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 23, 39

Conread position: 76-498
Cow position:
Alignm length: 428
Alignm identity: 139
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 236, 291

Conread position: 79-439
Cow position:
Alignm length: 372
Alignm identity: 247
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 116, 10

Conread position: 92-387
Cow position:
Alignm length: 304
Alignm identity: 196
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 89, 168

Conread position: 99-428
Cow position:
Alignm length: 340
Alignm identity: 233
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 81, 8

Conread position: 127-342
Cow position:
Alignm length: 233
Alignm identity: 169
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 49, 130

Conread position: 131-313
Cow position:
Alignm length: 193
Alignm identity: 141
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 49, 132

Conread position: 145-441
Cow position:
Alignm length: 304
Alignm identity: 204
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 42, 129

Conread position: 159-593
Cow position:
Alignm length: 443
Alignm identity: 291
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 105, 27

Conread position: 179-539
Cow position:
Alignm length: 377
Alignm identity: 249
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 18, 98

Conread position: 192-539
Cow position:
Alignm length: 353
Alignm identity: 237
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 29, 124

Conread position: 203-593
Cow position:
Alignm length: 402
Alignm identity: 257
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 36, 168

Conread position: 229-593
Cow position:
Alignm length: 377
Alignm identity: 251
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 10, 139

Conread position: 236-449
Cow position:
Alignm length: 217
Alignm identity: 153
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 77, 136

Conread position: 236-558
Cow position:
Alignm length: 330
Alignm identity: 230
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 34, 138

Conread position: 243-447
Cow position:
Alignm length: 213
Alignm identity: 153
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 27, 138

Conread position: 259-593
Cow position:
Alignm length: 340
Alignm identity: 234
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 52, 105

Conread position: 260-593
Cow position:
Alignm length: 337
Alignm identity: 232
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 54, 7

Conread position: 271-592
Cow position:
Alignm length: 340
Alignm identity: 227
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 43, 168

Conread position: 271-592
Cow position:
Alignm length: 329
Alignm identity: 219
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 42, 66

Conread position: 271-593
Cow position:
Alignm length: 330
Alignm identity: 221
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 43, 66

Conread position: 271-593
Cow position:
Alignm length: 330
Alignm identity: 217
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 43, 96

Conread position: 271-597
Cow position:
Alignm length: 334
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 96

Conread position: 279-591
Cow position:
Alignm length: 318
Alignm identity: 229
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 35, 73

Conread position: 281-574
Cow position:
Alignm length: 302
Alignm identity: 202
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 27, 93

Conread position: 298-557
Cow position:
Alignm length: 263
Alignm identity: 180
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 31, 23

Conread position: 312-593
Cow position:
Alignm length: 287
Alignm identity: 196
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 132, 53

Conread position: 332-568
Cow position:
Alignm length: 242
Alignm identity: 174
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 118, 37

Conread position: 338-591
Cow position:
Alignm length: 261
Alignm identity: 179
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 106, 30

Conread position: 406-586
Cow position:
Alignm length: 186
Alignm identity: 137
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 42, 0

Conread position: 440-595
Cow position:
Alignm length: 160
Alignm identity: 120
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 67, 24

Show alignments to all cow chromosomes.