Cow genome map
| Conread name: | Lym2-sn39_F12.f |
| Conread position: | 1-154 |
| Cow position: | chr23:8980690-8980856 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 1-176 |
| Cow position: | chr23:31446613-31446425 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 1-187 |
| Cow position: | chr23:30636503-30636703 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 1-193 |
| Cow position: | chr23:5779286-5779493 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 1-194 |
| Cow position: | chr23:2574364-2574157 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 1-198 |
| Cow position: | chr23:7273456-7273249 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 167 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 43, 128 |
| Conread position: | 1-208 |
| Cow position: | chr23:1330487-1330711 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 172 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 1-214 |
| Cow position: | chr23:16481555-16481780 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 156 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 1-226 |
| Cow position: | chr23:967549-967791 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 182 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 1-268 |
| Cow position: | chr23:28217089-28216800 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 200 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 1-286 |
| Cow position: | chr23:4359628-4359330 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 218 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 30, 110 |
| Conread position: | 1-290 |
| Cow position: | chr23:22875833-22876141 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 225 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 43, 157 |
| Conread position: | 1-398 |
| Cow position: | chr23:4276757-4276354 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 26 |
| Conread position: | 1-401 |
| Cow position: | chr23:2716150-2715721 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 394 |
| Conread position: | 1-427 |
| Cow position: | chr23:1141355-1140923 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 18 |
| Conread position: | 1-429 |
| Cow position: | chr23:2765580-2765987 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 82 |
| Conread position: | 1-444 |
| Cow position: | chr23:3881896-3882351 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 275 |
| Conread position: | 1-446 |
| Cow position: | chr23:19017503-19017059 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 300 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 49, 27 |
| Conread position: | 1-448 |
| Cow position: | chr23:28913211-28912748 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 274 |
| Conread position: | 1-449 |
| Cow position: | chr23:16617052-16617499 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 319 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 43, 103 |
| Conread position: | 1-464 |
| Cow position: | chr23:4640826-4641306 (view UCSC Genome Browser custom track) |
| Alignm length: | 492 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 245 |
| Conread position: | 1-503 |
| Cow position: | chr23:988842-989348 (view UCSC Genome Browser custom track) |
| Alignm length: | 525 |
| Alignm identity: | 381 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 206 |
| Conread position: | 1-504 |
| Cow position: | chr23:27399302-27398783 (view UCSC Genome Browser custom track) |
| Alignm length: | 530 |
| Alignm identity: | 367 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 286 |
| Conread position: | 1-505 |
| Cow position: | chr23:19489336-19488803 (view UCSC Genome Browser custom track) |
| Alignm length: | 538 |
| Alignm identity: | 373 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 307 |
| Conread position: | 1-538 |
| Cow position: | chr23:11778284-11777722 (view UCSC Genome Browser custom track) |
| Alignm length: | 574 |
| Alignm identity: | 361 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 274 |
| Conread position: | 1-539 |
| Cow position: | chr23:4815871-4815324 (view UCSC Genome Browser custom track) |
| Alignm length: | 567 |
| Alignm identity: | 381 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 61 |
| Conread position: | 1-556 |
| Cow position: | chr23:31595379-31595939 (view UCSC Genome Browser custom track) |
| Alignm length: | 576 |
| Alignm identity: | 409 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 176 |
| Conread position: | 1-557 |
| Cow position: | chr23:5874973-5875521 (view UCSC Genome Browser custom track) |
| Alignm length: | 577 |
| Alignm identity: | 425 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 156 |
| Conread position: | 1-559 |
| Cow position: | chr23:2795763-2796332 (view UCSC Genome Browser custom track) |
| Alignm length: | 584 |
| Alignm identity: | 395 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 243 |
| Conread position: | 1-559 |
| Cow position: | chr23:15525413-15524844 (view UCSC Genome Browser custom track) |
| Alignm length: | 586 |
| Alignm identity: | 411 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 270 |
| Conread position: | 1-579 |
| Cow position: | chr23:22147460-22148077 (view UCSC Genome Browser custom track) |
| Alignm length: | 621 |
| Alignm identity: | 421 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 328 |
| Conread position: | 1-593 |
| Cow position: | chr23:19950785-19951428 (view UCSC Genome Browser custom track) |
| Alignm length: | 644 |
| Alignm identity: | 428 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 2-437 |
| Cow position: | chr23:15220100-15220547 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 269 |
| Conread position: | 2-448 |
| Cow position: | chr23:34174983-34174534 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 312 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 10, 273 |
| Conread position: | 3-449 |
| Cow position: | chr23:3490713-3491172 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 293 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 7, 44 |
| Conread position: | 3-592 |
| Cow position: | chr23:4434261-4433633 (view UCSC Genome Browser custom track) |
| Alignm length: | 631 |
| Alignm identity: | 431 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 103 |
| Conread position: | 4-286 |
| Cow position: | chr23:20302007-20301704 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 214 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 40, 289 |
| Conread position: | 4-559 |
| Cow position: | chr23:36031574-36032149 (view UCSC Genome Browser custom track) |
| Alignm length: | 585 |
| Alignm identity: | 397 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 8 |
| Conread position: | 8-552 |
| Cow position: | chr23:3013426-3012880 (view UCSC Genome Browser custom track) |
| Alignm length: | 568 |
| Alignm identity: | 402 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 207 |
| Conread position: | 8-568 |
| Cow position: | chr23:1025266-1025832 (view UCSC Genome Browser custom track) |
| Alignm length: | 581 |
| Alignm identity: | 439 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 16 |
| Conread position: | 9-275 |
| Cow position: | chr23:14974978-14975259 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 212 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 35, 97 |
| Conread position: | 11-449 |
| Cow position: | chr23:14966184-14966616 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 199 |
| Conread position: | 42-438 |
| Cow position: | chr23:4509857-4509444 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 254 |
| Conread position: | 45-230 |
| Cow position: | chr23:31652102-31652287 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 135, 75 |
| Conread position: | 58-559 |
| Cow position: | chr23:2027401-2027896 (view UCSC Genome Browser custom track) |
| Alignm length: | 518 |
| Alignm identity: | 359 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 122, 11 |
| Conread position: | 60-558 |
| Cow position: | chr23:2524738-2525216 (view UCSC Genome Browser custom track) |
| Alignm length: | 506 |
| Alignm identity: | 352 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 126 |
| Conread position: | 75-558 |
| Cow position: | chr23:2045748-2045264 (view UCSC Genome Browser custom track) |
| Alignm length: | 505 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 74 |
| Conread position: | 80-276 |
| Cow position: | chr23:811075-810882 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 145 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 165, 9 |
| Conread position: | 93-559 |
| Cow position: | chr23:15176745-15176277 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 164 |
| Conread position: | 144-388 |
| Cow position: | chr23:8981177-8981412 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 36, 50 |
| Conread position: | 155-444 |
| Cow position: | chr23:4888398-4888107 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 208 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 26, 107 |
| Conread position: | 186-594 |
| Cow position: | chr23:2573888-2573470 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 285 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 11, 99 |
| Conread position: | 223-593 |
| Cow position: | chr23:20301747-20301367 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 260 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 8, 147 |
| Conread position: | 227-538 |
| Cow position: | chr23:969079-969384 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 211 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 87, 27 |
| Conread position: | 229-588 |
| Cow position: | chr23:28216819-28216454 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 257 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 10, 68 |
| Conread position: | 235-558 |
| Cow position: | chr23:7270124-7269810 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 30 |
| Conread position: | 238-533 |
| Cow position: | chr23:810677-810377 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 11 |
| Conread position: | 271-593 |
| Cow position: | chr23:14975280-14975607 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 224 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 37, 93 |
| Conread position: | 271-593 |
| Cow position: | chr23:31707485-31707156 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 216 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 41, 96 |
| Conread position: | 272-593 |
| Cow position: | chr23:4359241-4358917 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 185 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 54, 93 |
| Conread position: | 285-445 |
| Cow position: | chr23:22879663-22879825 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 29, 99 |
| Conread position: | 366-558 |
| Cow position: | chr23:8981539-8981728 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 78, 128 |
Show alignments to all cow chromosomes.