Cow genome map
| Conread name: | Lym2-sn39_F12.f |
| Conread position: | 1-184 |
| Cow position: | chr25:34656604-34656801 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 1-187 |
| Cow position: | chr25:12943599-12943796 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 146 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 1-193 |
| Cow position: | chr25:14016017-14015812 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 43, 25 |
| Conread position: | 1-207 |
| Cow position: | chr25:20629418-20629195 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 1-267 |
| Cow position: | chr25:32579808-32579537 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 192 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 177, 51 |
| Conread position: | 1-268 |
| Cow position: | chr25:20777056-20777347 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 202 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 1-268 |
| Cow position: | chr25:26922072-26921782 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 205 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 43, 94 |
| Conread position: | 1-268 |
| Cow position: | chr25:35362578-35362868 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 206 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 1-335 |
| Cow position: | chr25:25506491-25506140 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 296 |
| Conread position: | 1-446 |
| Cow position: | chr25:18092860-18092394 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 162 |
| Conread position: | 1-449 |
| Cow position: | chr25:34347151-34347613 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 270 |
| Conread position: | 1-451 |
| Cow position: | chr25:26279107-26278646 (view UCSC Genome Browser custom track) |
| Alignm length: | 477 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 127 |
| Conread position: | 1-464 |
| Cow position: | chr25:22147335-22146857 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 351 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 178 |
| Conread position: | 1-556 |
| Cow position: | chr25:18027788-18028329 (view UCSC Genome Browser custom track) |
| Alignm length: | 573 |
| Alignm identity: | 404 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 206 |
| Conread position: | 1-559 |
| Cow position: | chr25:8674756-8674197 (view UCSC Genome Browser custom track) |
| Alignm length: | 580 |
| Alignm identity: | 394 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 105 |
| Conread position: | 1-559 |
| Cow position: | chr25:13780877-13780304 (view UCSC Genome Browser custom track) |
| Alignm length: | 587 |
| Alignm identity: | 413 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 273 |
| Conread position: | 1-559 |
| Cow position: | chr25:18890174-18890737 (view UCSC Genome Browser custom track) |
| Alignm length: | 590 |
| Alignm identity: | 407 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 156 |
| Conread position: | 1-559 |
| Cow position: | chr25:26867066-26866485 (view UCSC Genome Browser custom track) |
| Alignm length: | 600 |
| Alignm identity: | 396 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 34, 277 |
| Conread position: | 1-563 |
| Cow position: | chr25:11375505-11376071 (view UCSC Genome Browser custom track) |
| Alignm length: | 585 |
| Alignm identity: | 427 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 206 |
| Conread position: | 1-588 |
| Cow position: | chr25:18275983-18276609 (view UCSC Genome Browser custom track) |
| Alignm length: | 631 |
| Alignm identity: | 440 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 183 |
| Conread position: | 1-593 |
| Cow position: | chr25:17589707-17590328 (view UCSC Genome Browser custom track) |
| Alignm length: | 623 |
| Alignm identity: | 407 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 287 |
| Conread position: | 1-593 |
| Cow position: | chr25:19916924-19916289 (view UCSC Genome Browser custom track) |
| Alignm length: | 638 |
| Alignm identity: | 415 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 111 |
| Conread position: | 1-593 |
| Cow position: | chr25:33991215-33991835 (view UCSC Genome Browser custom track) |
| Alignm length: | 623 |
| Alignm identity: | 391 |
| Alignm E-value: | 8.00141e-43 |
| Alignm gaps (pig, cow): | 43, 151 |
| Conread position: | 2-450 |
| Cow position: | chr25:23345862-23346318 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 58 |
| Conread position: | 2-469 |
| Cow position: | chr25:19288507-19288986 (view UCSC Genome Browser custom track) |
| Alignm length: | 486 |
| Alignm identity: | 314 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 42, 204 |
| Conread position: | 3-286 |
| Cow position: | chr25:17563075-17563371 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 19 |
| Conread position: | 3-424 |
| Cow position: | chr25:17560766-17561208 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 19 |
| Conread position: | 5-434 |
| Cow position: | chr25:20494199-20493758 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 301 |
| Alignm E-value: | 7.9874e-44 |
| Alignm gaps (pig, cow): | 45, 282 |
| Conread position: | 6-440 |
| Cow position: | chr25:24171865-24171426 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 289 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 39, 84 |
| Conread position: | 6-443 |
| Cow position: | chr25:11933689-11934170 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 317 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 31, 367 |
| Conread position: | 8-225 |
| Cow position: | chr25:18411457-18411683 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 36, 66 |
| Conread position: | 16-432 |
| Cow position: | chr25:29357714-29357307 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 274 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 29, 75 |
| Conread position: | 31-490 |
| Cow position: | chr25:17468888-17469353 (view UCSC Genome Browser custom track) |
| Alignm length: | 480 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 53 |
| Conread position: | 39-600 |
| Cow position: | chr25:18173132-18172537 (view UCSC Genome Browser custom track) |
| Alignm length: | 606 |
| Alignm identity: | 436 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 113 |
| Conread position: | 42-489 |
| Cow position: | chr25:34014553-34015017 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 92 |
| Conread position: | 42-558 |
| Cow position: | chr25:18302570-18302040 (view UCSC Genome Browser custom track) |
| Alignm length: | 546 |
| Alignm identity: | 405 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 93 |
| Conread position: | 74-401 |
| Cow position: | chr25:36239980-36239654 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 223 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 115, 5 |
| Conread position: | 97-558 |
| Cow position: | chr25:18060864-18061303 (view UCSC Genome Browser custom track) |
| Alignm length: | 467 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 47 |
| Conread position: | 219-504 |
| Cow position: | chr25:12944143-12944426 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 196 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 95, 51 |
| Conread position: | 267-591 |
| Cow position: | chr25:18411691-18412001 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 234 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 106, 48 |
| Conread position: | 271-593 |
| Cow position: | chr25:32579509-32579181 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 214 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 41, 93 |
| Conread position: | 282-593 |
| Cow position: | chr25:20777397-20777713 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 211 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 27, 85 |
| Conread position: | 289-593 |
| Cow position: | chr25:26921737-26921428 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 215 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 25, 78 |
| Conread position: | 483-589 |
| Cow position: | chr25:18092239-18092130 (view UCSC Genome Browser custom track) |
| Alignm length: | 110 |
| Alignm identity: | 89 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 29, 0 |
Show alignments to all cow chromosomes.