Cow genome map
| Conread name: | Lym2-sn39_F12.f |
| Conread position: | 1-204 |
| Cow position: | chr26:15144895-15145115 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 159 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 1-209 |
| Cow position: | chr26:6850312-6850537 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 172 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 1-219 |
| Cow position: | chr26:5675032-5674797 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 180 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 34, 185 |
| Conread position: | 1-225 |
| Cow position: | chr26:18854950-18854716 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 43, 110 |
| Conread position: | 1-244 |
| Cow position: | chr26:20254932-20254678 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 200 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 62 |
| Conread position: | 1-268 |
| Cow position: | chr26:2198489-2198218 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 189 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 31, 108 |
| Conread position: | 1-275 |
| Cow position: | chr26:8869739-8869445 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 212 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 43, 290 |
| Conread position: | 1-275 |
| Cow position: | chr26:9112328-9112032 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 210 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 43, 292 |
| Conread position: | 1-275 |
| Cow position: | chr26:19998349-19998053 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 215 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 43, 292 |
| Conread position: | 1-347 |
| Cow position: | chr26:4605320-4605656 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 254 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 43, 73 |
| Conread position: | 1-428 |
| Cow position: | chr26:3691668-3691243 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 25 |
| Conread position: | 1-538 |
| Cow position: | chr26:19351651-19352207 (view UCSC Genome Browser custom track) |
| Alignm length: | 570 |
| Alignm identity: | 396 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 275 |
| Conread position: | 1-539 |
| Cow position: | chr26:9563496-9564054 (view UCSC Genome Browser custom track) |
| Alignm length: | 573 |
| Alignm identity: | 394 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 275 |
| Conread position: | 1-555 |
| Cow position: | chr26:12574531-12575085 (view UCSC Genome Browser custom track) |
| Alignm length: | 580 |
| Alignm identity: | 404 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 209 |
| Conread position: | 1-556 |
| Cow position: | chr26:23605038-23605591 (view UCSC Genome Browser custom track) |
| Alignm length: | 584 |
| Alignm identity: | 416 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 158 |
| Conread position: | 1-583 |
| Cow position: | chr26:11254195-11254834 (view UCSC Genome Browser custom track) |
| Alignm length: | 644 |
| Alignm identity: | 418 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 43, 157 |
| Conread position: | 1-593 |
| Cow position: | chr26:2352496-2353128 (view UCSC Genome Browser custom track) |
| Alignm length: | 637 |
| Alignm identity: | 420 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 110 |
| Conread position: | 1-593 |
| Cow position: | chr26:3030948-3031587 (view UCSC Genome Browser custom track) |
| Alignm length: | 642 |
| Alignm identity: | 413 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 43, 360 |
| Conread position: | 2-275 |
| Cow position: | chr26:12588703-12588994 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 216 |
| Alignm E-value: | 7.00649e-43 |
| Alignm gaps (pig, cow): | 7, 287 |
| Conread position: | 2-547 |
| Cow position: | chr26:17397069-17397644 (view UCSC Genome Browser custom track) |
| Alignm length: | 590 |
| Alignm identity: | 393 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 280 |
| Conread position: | 2-593 |
| Cow position: | chr26:24201483-24200851 (view UCSC Genome Browser custom track) |
| Alignm length: | 635 |
| Alignm identity: | 409 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 42, 337 |
| Conread position: | 7-590 |
| Cow position: | chr26:9846278-9846891 (view UCSC Genome Browser custom track) |
| Alignm length: | 618 |
| Alignm identity: | 449 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 254 |
| Conread position: | 11-260 |
| Cow position: | chr26:12655798-12655540 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 197 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 90 |
| Conread position: | 11-318 |
| Cow position: | chr26:3074379-3074066 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 190 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 33, 84 |
| Conread position: | 28-583 |
| Cow position: | chr26:30782597-30781996 (view UCSC Genome Browser custom track) |
| Alignm length: | 602 |
| Alignm identity: | 386 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 41-597 |
| Cow position: | chr26:34012835-34012262 (view UCSC Genome Browser custom track) |
| Alignm length: | 578 |
| Alignm identity: | 439 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 212 |
| Conread position: | 43-428 |
| Cow position: | chr26:6516673-6516282 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 247 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 39, 115 |
| Conread position: | 46-393 |
| Cow position: | chr26:20262659-20262330 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 253 |
| Alignm E-value: | 7.00649e-43 |
| Alignm gaps (pig, cow): | 133, 44 |
| Conread position: | 55-429 |
| Cow position: | chr26:30590439-30590822 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 182 |
| Conread position: | 61-505 |
| Cow position: | chr26:19142516-19142095 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 48 |
| Conread position: | 62-503 |
| Cow position: | chr26:35150078-35150511 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 143 |
| Conread position: | 63-446 |
| Cow position: | chr26:9854326-9854708 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 137, 49 |
| Conread position: | 73-268 |
| Cow position: | chr26:8918763-8918559 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 145 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 106, 32 |
| Conread position: | 79-446 |
| Cow position: | chr26:9850878-9851244 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 33 |
| Conread position: | 94-442 |
| Cow position: | chr26:28424175-28424535 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 250 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 46, 34 |
| Conread position: | 159-592 |
| Cow position: | chr26:12588912-12589341 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 289 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 153, 27 |
| Conread position: | 218-558 |
| Cow position: | chr26:6850653-6850989 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 237 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 96, 52 |
| Conread position: | 222-559 |
| Cow position: | chr26:5674512-5674176 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 224 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 92, 32 |
| Conread position: | 271-592 |
| Cow position: | chr26:9112011-9111683 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 215 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 41, 96 |
| Conread position: | 271-593 |
| Cow position: | chr26:19998032-19997705 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 220 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 41, 96 |
| Conread position: | 398-591 |
| Cow position: | chr26:9090199-9090002 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 46, 136 |
Show alignments to all cow chromosomes.