Cow genome map
Conread name: | Lym2-sn39_F12.f |
Conread position: | 1-191 |
Cow position: | chr28:1815025-1815228 (view UCSC Genome Browser custom track) |
Alignm length: | 204 |
Alignm identity: | 159 |
Alignm E-value: | 3e-36 |
Alignm gaps (pig, cow): | 28, 0 |
Conread position: | 1-270 |
Cow position: | chr28:15920623-15920908 (view UCSC Genome Browser custom track) |
Alignm length: | 288 |
Alignm identity: | 205 |
Alignm E-value: | 9e-36 |
Alignm gaps (pig, cow): | 43, 108 |
Conread position: | 1-275 |
Cow position: | chr28:9155442-9155715 (view UCSC Genome Browser custom track) |
Alignm length: | 288 |
Alignm identity: | 210 |
Alignm E-value: | 2e-33 |
Alignm gaps (pig, cow): | 43, 162 |
Conread position: | 1-275 |
Cow position: | chr28:13441034-13441330 (view UCSC Genome Browser custom track) |
Alignm length: | 298 |
Alignm identity: | 209 |
Alignm E-value: | 6e-32 |
Alignm gaps (pig, cow): | 43, 292 |
Conread position: | 1-275 |
Cow position: | chr28:14750391-14750094 (view UCSC Genome Browser custom track) |
Alignm length: | 299 |
Alignm identity: | 209 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 43, 293 |
Conread position: | 1-275 |
Cow position: | chr28:15950824-15950528 (view UCSC Genome Browser custom track) |
Alignm length: | 298 |
Alignm identity: | 214 |
Alignm E-value: | 2e-34 |
Alignm gaps (pig, cow): | 34, 292 |
Conread position: | 1-377 |
Cow position: | chr28:24587276-24586889 (view UCSC Genome Browser custom track) |
Alignm length: | 389 |
Alignm identity: | 139 |
Alignm E-value: | 3e-26 |
Alignm gaps (pig, cow): | 43, 108 |
Conread position: | 1-397 |
Cow position: | chr28:7001831-7001434 (view UCSC Genome Browser custom track) |
Alignm length: | 415 |
Alignm identity: | 292 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 43, 171 |
Conread position: | 1-401 |
Cow position: | chr28:17388324-17387908 (view UCSC Genome Browser custom track) |
Alignm length: | 427 |
Alignm identity: | 313 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 43, 275 |
Conread position: | 1-419 |
Cow position: | chr28:26007876-26007445 (view UCSC Genome Browser custom track) |
Alignm length: | 440 |
Alignm identity: | 316 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 39, 205 |
Conread position: | 1-428 |
Cow position: | chr28:13459814-13459374 (view UCSC Genome Browser custom track) |
Alignm length: | 451 |
Alignm identity: | 331 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 34, 286 |
Conread position: | 1-440 |
Cow position: | chr28:34648779-34648338 (view UCSC Genome Browser custom track) |
Alignm length: | 462 |
Alignm identity: | 322 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 43, 25 |
Conread position: | 1-444 |
Cow position: | chr28:18520618-18521083 (view UCSC Genome Browser custom track) |
Alignm length: | 476 |
Alignm identity: | 337 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 43, 293 |
Conread position: | 1-446 |
Cow position: | chr28:34324671-34324209 (view UCSC Genome Browser custom track) |
Alignm length: | 468 |
Alignm identity: | 293 |
Alignm E-value: | 4e-27 |
Alignm gaps (pig, cow): | 42, 121 |
Conread position: | 1-449 |
Cow position: | chr28:2083447-2082984 (view UCSC Genome Browser custom track) |
Alignm length: | 475 |
Alignm identity: | 340 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 43, 292 |
Conread position: | 1-449 |
Cow position: | chr28:10582142-10582603 (view UCSC Genome Browser custom track) |
Alignm length: | 472 |
Alignm identity: | 343 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 43, 285 |
Conread position: | 1-449 |
Cow position: | chr28:34593686-34593222 (view UCSC Genome Browser custom track) |
Alignm length: | 475 |
Alignm identity: | 336 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 43, 275 |
Conread position: | 1-464 |
Cow position: | chr28:3192948-3193412 (view UCSC Genome Browser custom track) |
Alignm length: | 486 |
Alignm identity: | 346 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 34, 73 |
Conread position: | 1-489 |
Cow position: | chr28:782241-781727 (view UCSC Genome Browser custom track) |
Alignm length: | 525 |
Alignm identity: | 369 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 34, 276 |
Conread position: | 1-489 |
Cow position: | chr28:1168321-1168831 (view UCSC Genome Browser custom track) |
Alignm length: | 522 |
Alignm identity: | 372 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 33, 275 |
Conread position: | 1-502 |
Cow position: | chr28:5796658-5796142 (view UCSC Genome Browser custom track) |
Alignm length: | 521 |
Alignm identity: | 381 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 381 |
Conread position: | 1-530 |
Cow position: | chr28:5565704-5565157 (view UCSC Genome Browser custom track) |
Alignm length: | 561 |
Alignm identity: | 391 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 43, 289 |
Conread position: | 1-539 |
Cow position: | chr28:17667669-17668226 (view UCSC Genome Browser custom track) |
Alignm length: | 573 |
Alignm identity: | 395 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 34, 299 |
Conread position: | 1-539 |
Cow position: | chr28:26426431-26426970 (view UCSC Genome Browser custom track) |
Alignm length: | 561 |
Alignm identity: | 394 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 30, 163 |
Conread position: | 1-539 |
Cow position: | chr28:29819413-29818858 (view UCSC Genome Browser custom track) |
Alignm length: | 569 |
Alignm identity: | 391 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 43, 274 |
Conread position: | 1-539 |
Cow position: | chr28:32792536-32793086 (view UCSC Genome Browser custom track) |
Alignm length: | 571 |
Alignm identity: | 400 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 40, 276 |
Conread position: | 1-541 |
Cow position: | chr28:13522570-13522021 (view UCSC Genome Browser custom track) |
Alignm length: | 568 |
Alignm identity: | 397 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 34, 269 |
Conread position: | 1-550 |
Cow position: | chr28:12150162-12149603 (view UCSC Genome Browser custom track) |
Alignm length: | 578 |
Alignm identity: | 403 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 43, 17 |
Conread position: | 1-556 |
Cow position: | chr28:15681736-15681189 (view UCSC Genome Browser custom track) |
Alignm length: | 575 |
Alignm identity: | 423 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 43, 211 |
Conread position: | 1-559 |
Cow position: | chr28:8378407-8377826 (view UCSC Genome Browser custom track) |
Alignm length: | 598 |
Alignm identity: | 405 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 43, 17 |
Conread position: | 1-591 |
Cow position: | chr28:21325631-21325021 (view UCSC Genome Browser custom track) |
Alignm length: | 622 |
Alignm identity: | 458 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 43, 25 |
Conread position: | 2-201 |
Cow position: | chr28:17330679-17330902 (view UCSC Genome Browser custom track) |
Alignm length: | 225 |
Alignm identity: | 165 |
Alignm E-value: | 9e-25 |
Alignm gaps (pig, cow): | 38, 219 |
Conread position: | 2-275 |
Cow position: | chr28:1952975-1952690 (view UCSC Genome Browser custom track) |
Alignm length: | 290 |
Alignm identity: | 206 |
Alignm E-value: | 2e-34 |
Alignm gaps (pig, cow): | 42, 61 |
Conread position: | 2-444 |
Cow position: | chr28:14705830-14706284 (view UCSC Genome Browser custom track) |
Alignm length: | 469 |
Alignm identity: | 337 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 27, 273 |
Conread position: | 2-452 |
Cow position: | chr28:22827895-22827434 (view UCSC Genome Browser custom track) |
Alignm length: | 471 |
Alignm identity: | 327 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 94 |
Conread position: | 2-518 |
Cow position: | chr28:7901195-7900691 (view UCSC Genome Browser custom track) |
Alignm length: | 537 |
Alignm identity: | 391 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 14 |
Conread position: | 3-539 |
Cow position: | chr28:22261310-22261853 (view UCSC Genome Browser custom track) |
Alignm length: | 563 |
Alignm identity: | 392 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 41, 273 |
Conread position: | 4-552 |
Cow position: | chr28:2591758-2591218 (view UCSC Genome Browser custom track) |
Alignm length: | 572 |
Alignm identity: | 415 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 12 |
Conread position: | 4-587 |
Cow position: | chr28:21358861-21358252 (view UCSC Genome Browser custom track) |
Alignm length: | 615 |
Alignm identity: | 470 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 8, 159 |
Conread position: | 5-558 |
Cow position: | chr28:5115242-5115806 (view UCSC Genome Browser custom track) |
Alignm length: | 580 |
Alignm identity: | 382 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 39, 21 |
Conread position: | 6-591 |
Cow position: | chr28:5812548-5811938 (view UCSC Genome Browser custom track) |
Alignm length: | 618 |
Alignm identity: | 465 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 38, 206 |
Conread position: | 8-182 |
Cow position: | chr28:7822090-7821914 (view UCSC Genome Browser custom track) |
Alignm length: | 182 |
Alignm identity: | 135 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 36, 102 |
Conread position: | 10-546 |
Cow position: | chr28:7817066-7816534 (view UCSC Genome Browser custom track) |
Alignm length: | 558 |
Alignm identity: | 399 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 12, 145 |
Conread position: | 11-434 |
Cow position: | chr28:1387558-1387996 (view UCSC Genome Browser custom track) |
Alignm length: | 445 |
Alignm identity: | 326 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 33, 266 |
Conread position: | 31-540 |
Cow position: | chr28:9953942-9953444 (view UCSC Genome Browser custom track) |
Alignm length: | 529 |
Alignm identity: | 358 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 12, 119 |
Conread position: | 31-591 |
Cow position: | chr28:8721635-8722221 (view UCSC Genome Browser custom track) |
Alignm length: | 597 |
Alignm identity: | 442 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 12, 358 |
Conread position: | 41-590 |
Cow position: | chr28:7790443-7791001 (view UCSC Genome Browser custom track) |
Alignm length: | 570 |
Alignm identity: | 429 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 51, 80 |
Conread position: | 42-591 |
Cow position: | chr28:10619306-10619871 (view UCSC Genome Browser custom track) |
Alignm length: | 572 |
Alignm identity: | 425 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 41 |
Conread position: | 42-598 |
Cow position: | chr28:489285-488682 (view UCSC Genome Browser custom track) |
Alignm length: | 605 |
Alignm identity: | 391 |
Alignm E-value: | 4e-39 |
Alignm gaps (pig, cow): | 46, 308 |
Conread position: | 52-464 |
Cow position: | chr28:33252129-33251678 (view UCSC Genome Browser custom track) |
Alignm length: | 453 |
Alignm identity: | 325 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 46, 348 |
Conread position: | 55-206 |
Cow position: | chr28:9137246-9137404 (view UCSC Genome Browser custom track) |
Alignm length: | 159 |
Alignm identity: | 120 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 43, 0 |
Conread position: | 55-428 |
Cow position: | chr28:5752378-5752760 (view UCSC Genome Browser custom track) |
Alignm length: | 387 |
Alignm identity: | 283 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 43, 182 |
Conread position: | 55-537 |
Cow position: | chr28:7740037-7739563 (view UCSC Genome Browser custom track) |
Alignm length: | 503 |
Alignm identity: | 342 |
Alignm E-value: | 8.40779e-45 |
Alignm gaps (pig, cow): | 37, 215 |
Conread position: | 55-591 |
Cow position: | chr28:2990184-2990736 (view UCSC Genome Browser custom track) |
Alignm length: | 557 |
Alignm identity: | 415 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 71, 44 |
Conread position: | 60-529 |
Cow position: | chr28:1504418-1503933 (view UCSC Genome Browser custom track) |
Alignm length: | 497 |
Alignm identity: | 342 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 38, 209 |
Conread position: | 61-428 |
Cow position: | chr28:15035640-15036016 (view UCSC Genome Browser custom track) |
Alignm length: | 387 |
Alignm identity: | 278 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 37, 208 |
Conread position: | 65-449 |
Cow position: | chr28:10464077-10464464 (view UCSC Genome Browser custom track) |
Alignm length: | 395 |
Alignm identity: | 266 |
Alignm E-value: | 2.00386e-43 |
Alignm gaps (pig, cow): | 17, 161 |
Conread position: | 67-427 |
Cow position: | chr28:15378244-15378612 (view UCSC Genome Browser custom track) |
Alignm length: | 376 |
Alignm identity: | 263 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 24, 159 |
Conread position: | 71-591 |
Cow position: | chr28:24667380-24666842 (view UCSC Genome Browser custom track) |
Alignm length: | 542 |
Alignm identity: | 411 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 24, 248 |
Conread position: | 79-470 |
Cow position: | chr28:18089253-18089644 (view UCSC Genome Browser custom track) |
Alignm length: | 401 |
Alignm identity: | 257 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 102, 10 |
Conread position: | 84-464 |
Cow position: | chr28:28973479-28973857 (view UCSC Genome Browser custom track) |
Alignm length: | 393 |
Alignm identity: | 262 |
Alignm E-value: | 3e-35 |
Alignm gaps (pig, cow): | 100, 178 |
Conread position: | 87-427 |
Cow position: | chr28:5936764-5936421 (view UCSC Genome Browser custom track) |
Alignm length: | 354 |
Alignm identity: | 248 |
Alignm E-value: | 1.99993e-41 |
Alignm gaps (pig, cow): | 109, 188 |
Conread position: | 168-593 |
Cow position: | chr28:1952773-1952338 (view UCSC Genome Browser custom track) |
Alignm length: | 440 |
Alignm identity: | 283 |
Alignm E-value: | 3e-36 |
Alignm gaps (pig, cow): | 53, 11 |
Conread position: | 204-539 |
Cow position: | chr28:5245172-5244839 (view UCSC Genome Browser custom track) |
Alignm length: | 348 |
Alignm identity: | 227 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 110, 13 |
Conread position: | 206-554 |
Cow position: | chr28:17331038-17331375 (view UCSC Genome Browser custom track) |
Alignm length: | 352 |
Alignm identity: | 241 |
Alignm E-value: | 1.99993e-41 |
Alignm gaps (pig, cow): | 17, 64 |
Conread position: | 219-556 |
Cow position: | chr28:4381771-4382115 (view UCSC Genome Browser custom track) |
Alignm length: | 351 |
Alignm identity: | 248 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 66, 51 |
Conread position: | 219-556 |
Cow position: | chr28:9137394-9137735 (view UCSC Genome Browser custom track) |
Alignm length: | 353 |
Alignm identity: | 236 |
Alignm E-value: | 5e-31 |
Alignm gaps (pig, cow): | 93, 51 |
Conread position: | 271-593 |
Cow position: | chr28:7821014-7820688 (view UCSC Genome Browser custom track) |
Alignm length: | 330 |
Alignm identity: | 224 |
Alignm E-value: | 4e-39 |
Alignm gaps (pig, cow): | 42, 96 |
Conread position: | 282-593 |
Cow position: | chr28:6780815-6781124 (view UCSC Genome Browser custom track) |
Alignm length: | 315 |
Alignm identity: | 208 |
Alignm E-value: | 2e-33 |
Alignm gaps (pig, cow): | 157, 40 |
Conread position: | 311-511 |
Cow position: | chr28:9156897-9157098 (view UCSC Genome Browser custom track) |
Alignm length: | 203 |
Alignm identity: | 145 |
Alignm E-value: | 5e-30 |
Alignm gaps (pig, cow): | 133, 57 |
Conread position: | 470-600 |
Cow position: | chr28:2925276-2925141 (view UCSC Genome Browser custom track) |
Alignm length: | 136 |
Alignm identity: | 105 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 42, 0 |
Show alignments to all cow chromosomes.