Cow genome map

Conread name: Lym2-sn39_F12.f

Conread position: 1-198
Cow position:
Alignm length: 210
Alignm identity: 151
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 43, 0

Conread position: 1-217
Cow position:
Alignm length: 232
Alignm identity: 165
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 51, 153

Conread position: 1-225
Cow position:
Alignm length: 243
Alignm identity: 185
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 11, 237

Conread position: 1-275
Cow position:
Alignm length: 293
Alignm identity: 202
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 43, 94

Conread position: 1-275
Cow position:
Alignm length: 299
Alignm identity: 204
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 43, 293

Conread position: 1-275
Cow position:
Alignm length: 298
Alignm identity: 209
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 43, 292

Conread position: 1-286
Cow position:
Alignm length: 303
Alignm identity: 213
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 34, 82

Conread position: 1-289
Cow position:
Alignm length: 312
Alignm identity: 221
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 34, 156

Conread position: 1-426
Cow position:
Alignm length: 452
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 275

Conread position: 1-443
Cow position:
Alignm length: 469
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 132

Conread position: 1-444
Cow position:
Alignm length: 470
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 288

Conread position: 1-449
Cow position:
Alignm length: 460
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 52

Conread position: 1-449
Cow position:
Alignm length: 477
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 275

Conread position: 1-455
Cow position:
Alignm length: 472
Alignm identity: 307
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 47, 11

Conread position: 1-464
Cow position:
Alignm length: 494
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 274

Conread position: 1-504
Cow position:
Alignm length: 534
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 275

Conread position: 1-504
Cow position:
Alignm length: 529
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 17

Conread position: 1-530
Cow position:
Alignm length: 564
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 17

Conread position: 1-530
Cow position:
Alignm length: 562
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 284

Conread position: 1-538
Cow position:
Alignm length: 570
Alignm identity: 365
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 43, 27

Conread position: 1-538
Cow position:
Alignm length: 564
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 275

Conread position: 1-539
Cow position:
Alignm length: 574
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 275

Conread position: 1-539
Cow position:
Alignm length: 571
Alignm identity: 375
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 36, 17

Conread position: 1-539
Cow position:
Alignm length: 575
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 139

Conread position: 1-540
Cow position:
Alignm length: 572
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 276

Conread position: 1-550
Cow position:
Alignm length: 583
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 275

Conread position: 1-558
Cow position:
Alignm length: 572
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 203

Conread position: 1-559
Cow position:
Alignm length: 586
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 18

Conread position: 1-565
Cow position:
Alignm length: 579
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 96

Conread position: 1-593
Cow position:
Alignm length: 646
Alignm identity: 419
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 43, 298

Conread position: 2-268
Cow position:
Alignm length: 289
Alignm identity: 203
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 42, 155

Conread position: 2-426
Cow position:
Alignm length: 450
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 71

Conread position: 2-449
Cow position:
Alignm length: 459
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 100

Conread position: 2-530
Cow position:
Alignm length: 560
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 274

Conread position: 2-538
Cow position:
Alignm length: 556
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 122

Conread position: 2-539
Cow position:
Alignm length: 563
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 271

Conread position: 2-557
Cow position:
Alignm length: 583
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 131

Conread position: 2-559
Cow position:
Alignm length: 590
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 161

Conread position: 2-593
Cow position:
Alignm length: 627
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 167

Conread position: 3-464
Cow position:
Alignm length: 494
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 122

Conread position: 3-556
Cow position:
Alignm length: 576
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 175

Conread position: 3-579
Cow position:
Alignm length: 617
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 389

Conread position: 4-268
Cow position:
Alignm length: 289
Alignm identity: 198
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 42, 0

Conread position: 4-600
Cow position:
Alignm length: 619
Alignm identity: 444
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 6

Conread position: 6-253
Cow position:
Alignm length: 262
Alignm identity: 194
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 38, 59

Conread position: 6-432
Cow position:
Alignm length: 446
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 232

Conread position: 6-542
Cow position:
Alignm length: 563
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 203

Conread position: 27-558
Cow position:
Alignm length: 552
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 122

Conread position: 31-268
Cow position:
Alignm length: 246
Alignm identity: 175
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 12, 46

Conread position: 42-227
Cow position:
Alignm length: 195
Alignm identity: 141
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 49, 0

Conread position: 42-422
Cow position:
Alignm length: 388
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 155

Conread position: 43-443
Cow position:
Alignm length: 408
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 47

Conread position: 65-511
Cow position:
Alignm length: 468
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 292

Conread position: 89-591
Cow position:
Alignm length: 521
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 156

Conread position: 103-582
Cow position:
Alignm length: 495
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 182

Conread position: 103-582
Cow position:
Alignm length: 495
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 182

Conread position: 118-444
Cow position:
Alignm length: 344
Alignm identity: 228
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 49, 37

Conread position: 159-593
Cow position:
Alignm length: 444
Alignm identity: 283
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 153, 26

Conread position: 174-443
Cow position:
Alignm length: 280
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 202

Conread position: 190-557
Cow position:
Alignm length: 373
Alignm identity: 260
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 124, 29

Conread position: 224-593
Cow position:
Alignm length: 385
Alignm identity: 262
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 7, 151

Conread position: 227-558
Cow position:
Alignm length: 344
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 147

Conread position: 229-593
Cow position:
Alignm length: 374
Alignm identity: 251
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 13, 124

Conread position: 267-593
Cow position:
Alignm length: 335
Alignm identity: 230
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 47, 5

Conread position: 271-593
Cow position:
Alignm length: 330
Alignm identity: 223
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 43, 82

Conread position: 289-592
Cow position:
Alignm length: 311
Alignm identity: 206
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 23, 78

Conread position: 289-592
Cow position:
Alignm length: 312
Alignm identity: 203
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 23, 78

Conread position: 311-556
Cow position:
Alignm length: 247
Alignm identity: 178
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 133, 58

Conread position: 313-441
Cow position:
Alignm length: 129
Alignm identity: 104
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 55, 0

Conread position: 483-589
Cow position:
Alignm length: 110
Alignm identity: 91
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 27, 56

Show alignments to all cow chromosomes.