Cow genome map
| Conread name: | Lym2-sn39_F12.f |
| Conread position: | 1-146 |
| Cow position: | chr3:50915032-50914879 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 117 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 1-192 |
| Cow position: | chr3:47179477-47179682 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 1-193 |
| Cow position: | chr3:472264-472074 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 152 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 11, 105 |
| Conread position: | 1-193 |
| Cow position: | chr3:3806086-3805899 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 148 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 43, 81 |
| Conread position: | 1-194 |
| Cow position: | chr3:19757233-19757440 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 1-261 |
| Cow position: | chr3:41212011-41212294 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 203 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 1-268 |
| Cow position: | chr3:49614250-49614535 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 208 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 1-275 |
| Cow position: | chr3:2917189-2916900 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 208 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 43, 94 |
| Conread position: | 1-275 |
| Cow position: | chr3:4285612-4285319 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 211 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 43, 289 |
| Conread position: | 1-275 |
| Cow position: | chr3:15989309-15989597 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 210 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 34, 93 |
| Conread position: | 1-275 |
| Cow position: | chr3:19878389-19878095 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 207 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 43, 290 |
| Conread position: | 1-275 |
| Cow position: | chr3:24314205-24313909 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 210 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 43, 292 |
| Conread position: | 1-275 |
| Cow position: | chr3:46678186-46678482 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 213 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 45, 290 |
| Conread position: | 1-275 |
| Cow position: | chr3:57856463-57856167 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 214 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 43, 292 |
| Conread position: | 1-275 |
| Cow position: | chr3:64650358-64650055 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 216 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 43, 299 |
| Conread position: | 1-275 |
| Cow position: | chr3:72704924-72704628 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 211 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 43, 156 |
| Conread position: | 1-277 |
| Cow position: | chr3:46861571-46861870 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 213 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 43, 293 |
| Conread position: | 1-286 |
| Cow position: | chr3:22335619-22335320 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 216 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 43, 285 |
| Conread position: | 1-286 |
| Cow position: | chr3:66891235-66891533 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 212 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 34, 107 |
| Conread position: | 1-333 |
| Cow position: | chr3:45032468-45032123 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 247 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 46, 268 |
| Conread position: | 1-358 |
| Cow position: | chr3:50128148-50128522 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 274 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 33, 73 |
| Conread position: | 1-426 |
| Cow position: | chr3:5883267-5882826 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 289 |
| Conread position: | 1-428 |
| Cow position: | chr3:38866128-38865691 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 17 |
| Conread position: | 1-440 |
| Cow position: | chr3:6685188-6684730 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 355 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 218 |
| Conread position: | 1-440 |
| Cow position: | chr3:66119383-66118948 (view UCSC Genome Browser custom track) |
| Alignm length: | 463 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 164 |
| Conread position: | 1-444 |
| Cow position: | chr3:19692358-19692815 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 95 |
| Conread position: | 1-446 |
| Cow position: | chr3:5996145-5996602 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 17 |
| Conread position: | 1-449 |
| Cow position: | chr3:21945674-21946141 (view UCSC Genome Browser custom track) |
| Alignm length: | 478 |
| Alignm identity: | 314 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 11, 234 |
| Conread position: | 1-449 |
| Cow position: | chr3:57484997-57485462 (view UCSC Genome Browser custom track) |
| Alignm length: | 477 |
| Alignm identity: | 352 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 273 |
| Conread position: | 1-449 |
| Cow position: | chr3:64358438-64358908 (view UCSC Genome Browser custom track) |
| Alignm length: | 477 |
| Alignm identity: | 360 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 141 |
| Conread position: | 1-449 |
| Cow position: | chr3:69933124-69932664 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 271 |
| Conread position: | 1-464 |
| Cow position: | chr3:72629795-72629319 (view UCSC Genome Browser custom track) |
| Alignm length: | 488 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 271 |
| Conread position: | 1-489 |
| Cow position: | chr3:30314287-30313749 (view UCSC Genome Browser custom track) |
| Alignm length: | 540 |
| Alignm identity: | 364 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 43, 409 |
| Conread position: | 1-489 |
| Cow position: | chr3:40823115-40822591 (view UCSC Genome Browser custom track) |
| Alignm length: | 527 |
| Alignm identity: | 355 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 279 |
| Conread position: | 1-489 |
| Cow position: | chr3:59861092-59860583 (view UCSC Genome Browser custom track) |
| Alignm length: | 520 |
| Alignm identity: | 372 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 274 |
| Conread position: | 1-504 |
| Cow position: | chr3:75041436-75041944 (view UCSC Genome Browser custom track) |
| Alignm length: | 525 |
| Alignm identity: | 360 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 89 |
| Conread position: | 1-504 |
| Cow position: | chr3:78027684-78028210 (view UCSC Genome Browser custom track) |
| Alignm length: | 537 |
| Alignm identity: | 376 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 275 |
| Conread position: | 1-517 |
| Cow position: | chr3:13513474-13513976 (view UCSC Genome Browser custom track) |
| Alignm length: | 534 |
| Alignm identity: | 362 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 74 |
| Conread position: | 1-538 |
| Cow position: | chr3:2711231-2711785 (view UCSC Genome Browser custom track) |
| Alignm length: | 571 |
| Alignm identity: | 396 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 293 |
| Conread position: | 1-539 |
| Cow position: | chr3:10239376-10238821 (view UCSC Genome Browser custom track) |
| Alignm length: | 573 |
| Alignm identity: | 408 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 18 |
| Conread position: | 1-539 |
| Cow position: | chr3:23291678-23292235 (view UCSC Genome Browser custom track) |
| Alignm length: | 571 |
| Alignm identity: | 395 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 273 |
| Conread position: | 1-546 |
| Cow position: | chr3:2653838-2653293 (view UCSC Genome Browser custom track) |
| Alignm length: | 566 |
| Alignm identity: | 400 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 119 |
| Conread position: | 1-550 |
| Cow position: | chr3:18542681-18543273 (view UCSC Genome Browser custom track) |
| Alignm length: | 600 |
| Alignm identity: | 411 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 383 |
| Conread position: | 1-556 |
| Cow position: | chr3:207433-207983 (view UCSC Genome Browser custom track) |
| Alignm length: | 574 |
| Alignm identity: | 408 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 206 |
| Conread position: | 1-556 |
| Cow position: | chr3:31354526-31355071 (view UCSC Genome Browser custom track) |
| Alignm length: | 575 |
| Alignm identity: | 413 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 90 |
| Conread position: | 1-556 |
| Cow position: | chr3:34396330-34396876 (view UCSC Genome Browser custom track) |
| Alignm length: | 568 |
| Alignm identity: | 407 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 83 |
| Conread position: | 1-556 |
| Cow position: | chr3:42580238-42580779 (view UCSC Genome Browser custom track) |
| Alignm length: | 575 |
| Alignm identity: | 407 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 207 |
| Conread position: | 1-558 |
| Cow position: | chr3:5047457-5048009 (view UCSC Genome Browser custom track) |
| Alignm length: | 578 |
| Alignm identity: | 419 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 208 |
| Conread position: | 1-558 |
| Cow position: | chr3:5829902-5830452 (view UCSC Genome Browser custom track) |
| Alignm length: | 571 |
| Alignm identity: | 405 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 120 |
| Conread position: | 1-558 |
| Cow position: | chr3:55229967-55230532 (view UCSC Genome Browser custom track) |
| Alignm length: | 579 |
| Alignm identity: | 400 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 114 |
| Conread position: | 1-558 |
| Cow position: | chr3:77474489-77473960 (view UCSC Genome Browser custom track) |
| Alignm length: | 573 |
| Alignm identity: | 411 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 155 |
| Conread position: | 1-559 |
| Cow position: | chr3:18811229-18810654 (view UCSC Genome Browser custom track) |
| Alignm length: | 591 |
| Alignm identity: | 410 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 25 |
| Conread position: | 1-559 |
| Cow position: | chr3:21182958-21183527 (view UCSC Genome Browser custom track) |
| Alignm length: | 591 |
| Alignm identity: | 411 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 17 |
| Conread position: | 1-559 |
| Cow position: | chr3:34031170-34031748 (view UCSC Genome Browser custom track) |
| Alignm length: | 594 |
| Alignm identity: | 409 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 289 |
| Conread position: | 1-559 |
| Cow position: | chr3:43039965-43040535 (view UCSC Genome Browser custom track) |
| Alignm length: | 589 |
| Alignm identity: | 416 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 273 |
| Conread position: | 1-559 |
| Cow position: | chr3:47273242-47273808 (view UCSC Genome Browser custom track) |
| Alignm length: | 588 |
| Alignm identity: | 402 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 17 |
| Conread position: | 1-559 |
| Cow position: | chr3:56650538-56651105 (view UCSC Genome Browser custom track) |
| Alignm length: | 584 |
| Alignm identity: | 400 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 25 |
| Conread position: | 1-559 |
| Cow position: | chr3:64017637-64018218 (view UCSC Genome Browser custom track) |
| Alignm length: | 595 |
| Alignm identity: | 408 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 273 |
| Conread position: | 1-561 |
| Cow position: | chr3:5954460-5955021 (view UCSC Genome Browser custom track) |
| Alignm length: | 587 |
| Alignm identity: | 402 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 105 |
| Conread position: | 1-571 |
| Cow position: | chr3:56340693-56341307 (view UCSC Genome Browser custom track) |
| Alignm length: | 618 |
| Alignm identity: | 416 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 399 |
| Conread position: | 1-591 |
| Cow position: | chr3:2909367-2909949 (view UCSC Genome Browser custom track) |
| Alignm length: | 610 |
| Alignm identity: | 447 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 35 |
| Conread position: | 1-591 |
| Cow position: | chr3:52865022-52865637 (view UCSC Genome Browser custom track) |
| Alignm length: | 619 |
| Alignm identity: | 484 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 392 |
| Conread position: | 1-591 |
| Cow position: | chr3:63005422-63006044 (view UCSC Genome Browser custom track) |
| Alignm length: | 624 |
| Alignm identity: | 461 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 105 |
| Conread position: | 1-592 |
| Cow position: | chr3:39326417-39325814 (view UCSC Genome Browser custom track) |
| Alignm length: | 616 |
| Alignm identity: | 479 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 239 |
| Conread position: | 1-593 |
| Cow position: | chr3:3522741-3522097 (view UCSC Genome Browser custom track) |
| Alignm length: | 647 |
| Alignm identity: | 419 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 43, 597 |
| Conread position: | 1-593 |
| Cow position: | chr3:14440002-14440641 (view UCSC Genome Browser custom track) |
| Alignm length: | 641 |
| Alignm identity: | 420 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 463 |
| Conread position: | 1-593 |
| Cow position: | chr3:19802150-19801538 (view UCSC Genome Browser custom track) |
| Alignm length: | 621 |
| Alignm identity: | 476 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 159 |
| Conread position: | 1-593 |
| Cow position: | chr3:47081931-47082560 (view UCSC Genome Browser custom track) |
| Alignm length: | 639 |
| Alignm identity: | 418 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 34, 93 |
| Conread position: | 2-198 |
| Cow position: | chr3:56321036-56320828 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 2-215 |
| Cow position: | chr3:6782116-6781886 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 166 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 2-268 |
| Cow position: | chr3:32623283-32623566 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 199 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 42, 84 |
| Conread position: | 2-275 |
| Cow position: | chr3:17828921-17829216 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 210 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 42, 291 |
| Conread position: | 2-275 |
| Cow position: | chr3:32146359-32146652 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 207 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 42, 289 |
| Conread position: | 2-324 |
| Cow position: | chr3:70083918-70084241 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 250 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 42, 116 |
| Conread position: | 2-445 |
| Cow position: | chr3:57499788-57500258 (view UCSC Genome Browser custom track) |
| Alignm length: | 478 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 184 |
| Conread position: | 2-544 |
| Cow position: | chr3:40340235-40340830 (view UCSC Genome Browser custom track) |
| Alignm length: | 596 |
| Alignm identity: | 394 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 2-559 |
| Cow position: | chr3:48061101-48061679 (view UCSC Genome Browser custom track) |
| Alignm length: | 592 |
| Alignm identity: | 401 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 269 |
| Conread position: | 2-562 |
| Cow position: | chr3:42431958-42431365 (view UCSC Genome Browser custom track) |
| Alignm length: | 600 |
| Alignm identity: | 403 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 158 |
| Conread position: | 2-593 |
| Cow position: | chr3:36117388-36116750 (view UCSC Genome Browser custom track) |
| Alignm length: | 642 |
| Alignm identity: | 420 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 532 |
| Conread position: | 2-593 |
| Cow position: | chr3:64028357-64029001 (view UCSC Genome Browser custom track) |
| Alignm length: | 646 |
| Alignm identity: | 429 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 374 |
| Conread position: | 3-559 |
| Cow position: | chr3:66618908-66618358 (view UCSC Genome Browser custom track) |
| Alignm length: | 576 |
| Alignm identity: | 390 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 194 |
| Conread position: | 3-593 |
| Cow position: | chr3:19938638-19938006 (view UCSC Genome Browser custom track) |
| Alignm length: | 638 |
| Alignm identity: | 424 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 373 |
| Conread position: | 4-194 |
| Cow position: | chr3:19943788-19943599 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 12, 49 |
| Conread position: | 4-429 |
| Cow position: | chr3:15178035-15177600 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 71 |
| Conread position: | 4-539 |
| Cow position: | chr3:36882189-36882739 (view UCSC Genome Browser custom track) |
| Alignm length: | 565 |
| Alignm identity: | 390 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 6 |
| Conread position: | 4-587 |
| Cow position: | chr3:49677483-49676869 (view UCSC Genome Browser custom track) |
| Alignm length: | 618 |
| Alignm identity: | 460 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 66 |
| Conread position: | 6-185 |
| Cow position: | chr3:54864975-54865152 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 137 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 39, 85 |
| Conread position: | 6-558 |
| Cow position: | chr3:9716533-9715979 (view UCSC Genome Browser custom track) |
| Alignm length: | 573 |
| Alignm identity: | 414 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 188 |
| Conread position: | 7-189 |
| Cow position: | chr3:14588403-14588213 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 28, 110 |
| Conread position: | 7-449 |
| Cow position: | chr3:24591890-24592345 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 354 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 76 |
| Conread position: | 8-265 |
| Cow position: | chr3:48231262-48231528 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 212 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 86 |
| Conread position: | 8-558 |
| Cow position: | chr3:31898252-31898787 (view UCSC Genome Browser custom track) |
| Alignm length: | 568 |
| Alignm identity: | 398 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 153 |
| Conread position: | 10-538 |
| Cow position: | chr3:594307-593770 (view UCSC Genome Browser custom track) |
| Alignm length: | 554 |
| Alignm identity: | 375 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 151 |
| Conread position: | 31-435 |
| Cow position: | chr3:36691497-36691895 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 175 |
| Conread position: | 38-219 |
| Cow position: | chr3:36127073-36126895 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 138 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 142, 9 |
| Conread position: | 42-344 |
| Cow position: | chr3:3980068-3979751 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 91 |
| Conread position: | 42-416 |
| Cow position: | chr3:83234412-83234792 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 242 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 55, 73 |
| Conread position: | 42-440 |
| Cow position: | chr3:83700467-83700858 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 272 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 140, 19 |
| Conread position: | 42-444 |
| Cow position: | chr3:58208416-58208814 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 280 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 45, 60 |
| Conread position: | 42-448 |
| Cow position: | chr3:14634420-14634822 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 154, 48 |
| Conread position: | 42-508 |
| Cow position: | chr3:3054291-3053831 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 365 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 160 |
| Conread position: | 42-558 |
| Cow position: | chr3:2633607-2633096 (view UCSC Genome Browser custom track) |
| Alignm length: | 532 |
| Alignm identity: | 383 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 160 |
| Conread position: | 42-593 |
| Cow position: | chr3:24359940-24359379 (view UCSC Genome Browser custom track) |
| Alignm length: | 577 |
| Alignm identity: | 373 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 50, 244 |
| Conread position: | 42-593 |
| Cow position: | chr3:37968763-37968172 (view UCSC Genome Browser custom track) |
| Alignm length: | 593 |
| Alignm identity: | 409 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 359 |
| Conread position: | 43-439 |
| Cow position: | chr3:49308999-49309385 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 264 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 38, 102 |
| Conread position: | 43-449 |
| Cow position: | chr3:32842756-32843164 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 287 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 43, 26 |
| Conread position: | 43-455 |
| Cow position: | chr3:18357201-18357615 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 273 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 31, 157 |
| Conread position: | 46-449 |
| Cow position: | chr3:36099040-36099446 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 134, 37 |
| Conread position: | 51-562 |
| Cow position: | chr3:46502704-46502170 (view UCSC Genome Browser custom track) |
| Alignm length: | 545 |
| Alignm identity: | 359 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 41, 97 |
| Conread position: | 56-556 |
| Cow position: | chr3:66637711-66637218 (view UCSC Genome Browser custom track) |
| Alignm length: | 515 |
| Alignm identity: | 368 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 146 |
| Conread position: | 65-589 |
| Cow position: | chr3:17951314-17950783 (view UCSC Genome Browser custom track) |
| Alignm length: | 542 |
| Alignm identity: | 417 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 41 |
| Conread position: | 69-449 |
| Cow position: | chr3:14754840-14755232 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 277 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 17, 59 |
| Conread position: | 70-389 |
| Cow position: | chr3:18464099-18464435 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 314 |
| Conread position: | 73-593 |
| Cow position: | chr3:22335517-22334981 (view UCSC Genome Browser custom track) |
| Alignm length: | 543 |
| Alignm identity: | 344 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 12, 41 |
| Conread position: | 78-593 |
| Cow position: | chr3:7159169-7159695 (view UCSC Genome Browser custom track) |
| Alignm length: | 535 |
| Alignm identity: | 332 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 89, 29 |
| Conread position: | 79-275 |
| Cow position: | chr3:7159148-7159350 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 99, 21 |
| Conread position: | 87-442 |
| Cow position: | chr3:52861501-52861148 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 246 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 8, 53 |
| Conread position: | 87-449 |
| Cow position: | chr3:80871364-80871003 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 242 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 11, 171 |
| Conread position: | 94-489 |
| Cow position: | chr3:53515354-53514948 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 86, 169 |
| Conread position: | 125-558 |
| Cow position: | chr3:69211795-69212203 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 298 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 56, 35 |
| Conread position: | 150-593 |
| Cow position: | chr3:15989505-15989945 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 289 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 162, 35 |
| Conread position: | 154-462 |
| Cow position: | chr3:43193143-43193458 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 233 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 29, 126 |
| Conread position: | 156-556 |
| Cow position: | chr3:44255415-44255804 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 40 |
| Conread position: | 159-593 |
| Cow position: | chr3:41212224-41212665 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 286 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 78, 27 |
| Conread position: | 178-450 |
| Cow position: | chr3:54865175-54865449 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 191 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 43, 10 |
| Conread position: | 196-449 |
| Cow position: | chr3:27905755-27905999 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 188 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 61, 27 |
| Conread position: | 203-593 |
| Cow position: | chr3:32623521-32623923 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 48 |
| Conread position: | 217-449 |
| Cow position: | chr3:48329909-48329679 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 97, 75 |
| Conread position: | 226-593 |
| Cow position: | chr3:2369700-2370077 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 244 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 13, 145 |
| Conread position: | 229-587 |
| Cow position: | chr3:50148164-50147797 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 235 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 10, 142 |
| Conread position: | 229-593 |
| Cow position: | chr3:6781580-6781206 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 255 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 10, 137 |
| Conread position: | 236-449 |
| Cow position: | chr3:26948811-26948592 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 10, 107 |
| Conread position: | 265-444 |
| Cow position: | chr3:50011860-50011677 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 142 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 48, 73 |
| Conread position: | 267-593 |
| Cow position: | chr3:49614559-49614890 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 222 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 45, 6 |
| Conread position: | 271-455 |
| Cow position: | chr3:56320296-56320113 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 43, 79 |
| Conread position: | 271-593 |
| Cow position: | chr3:46861889-46862216 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 219 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 40, 92 |
| Conread position: | 271-593 |
| Cow position: | chr3:47616509-47616838 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 218 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 41, 96 |
| Conread position: | 271-593 |
| Cow position: | chr3:72704607-72704280 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 218 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 41, 96 |
| Conread position: | 278-428 |
| Cow position: | chr3:66805238-66805086 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 15, 8 |
| Conread position: | 278-556 |
| Cow position: | chr3:471781-471504 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 200 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 36, 94 |
| Conread position: | 278-593 |
| Cow position: | chr3:48841053-48840733 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 218 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 36, 89 |
| Conread position: | 279-593 |
| Cow position: | chr3:17829245-17829561 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 204 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 165, 60 |
| Conread position: | 280-593 |
| Cow position: | chr3:46678512-46678831 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 221 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 35, 87 |
| Conread position: | 286-449 |
| Cow position: | chr3:60210710-60210875 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 122 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 36, 82 |
| Conread position: | 297-591 |
| Cow position: | chr3:48231521-48231815 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 223 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 17, 39 |
| Conread position: | 335-593 |
| Cow position: | chr3:47741436-47741697 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 174 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 104, 29 |
| Conread position: | 340-588 |
| Cow position: | chr3:3907566-3907817 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 190 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 104, 28 |
| Conread position: | 352-600 |
| Cow position: | chr3:58947053-58946813 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 183 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 158, 61 |
| Conread position: | 425-591 |
| Cow position: | chr3:15054815-15054984 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 26, 56 |
Show alignments to all cow chromosomes.