Cow genome map

Conread name: Lym2-sn39_F12.f

Conread position: 1-146
Cow position: chr3:50915032-50914879 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 117
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 28, 0

Conread position: 1-192
Cow position: chr3:47179477-47179682 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 148
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 43, 0

Conread position: 1-193
Cow position: chr3:472264-472074 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 152
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 11, 105

Conread position: 1-193
Cow position: chr3:3806086-3805899 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 148
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 43, 81

Conread position: 1-194
Cow position: chr3:19757233-19757440 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 164
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 43, 0

Conread position: 1-261
Cow position: chr3:41212011-41212294 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 203
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 43, 0

Conread position: 1-268
Cow position: chr3:49614250-49614535 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 208
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 43, 0

Conread position: 1-275
Cow position: chr3:2917189-2916900 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 208
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 43, 94

Conread position: 1-275
Cow position: chr3:4285612-4285319 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 211
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 43, 289

Conread position: 1-275
Cow position: chr3:15989309-15989597 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 210
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 34, 93

Conread position: 1-275
Cow position: chr3:19878389-19878095 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 207
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 43, 290

Conread position: 1-275
Cow position: chr3:24314205-24313909 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 210
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 43, 292

Conread position: 1-275
Cow position: chr3:46678186-46678482 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 213
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 45, 290

Conread position: 1-275
Cow position: chr3:57856463-57856167 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 214
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 43, 292

Conread position: 1-275
Cow position: chr3:64650358-64650055 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 216
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 43, 299

Conread position: 1-275
Cow position: chr3:72704924-72704628 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 211
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 43, 156

Conread position: 1-277
Cow position: chr3:46861571-46861870 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 213
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 43, 293

Conread position: 1-286
Cow position: chr3:22335619-22335320 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 216
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 43, 285

Conread position: 1-286
Cow position: chr3:66891235-66891533 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 212
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 34, 107

Conread position: 1-333
Cow position: chr3:45032468-45032123 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 247
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 46, 268

Conread position: 1-358
Cow position: chr3:50128148-50128522 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 274
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 33, 73

Conread position: 1-426
Cow position: chr3:5883267-5882826 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 289

Conread position: 1-428
Cow position: chr3:38866128-38865691 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 17

Conread position: 1-440
Cow position: chr3:6685188-6684730 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 218

Conread position: 1-440
Cow position: chr3:66119383-66118948 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 164

Conread position: 1-444
Cow position: chr3:19692358-19692815 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 95

Conread position: 1-446
Cow position: chr3:5996145-5996602 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 17

Conread position: 1-449
Cow position: chr3:21945674-21946141 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 314
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 11, 234

Conread position: 1-449
Cow position: chr3:57484997-57485462 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 273

Conread position: 1-449
Cow position: chr3:64358438-64358908 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 141

Conread position: 1-449
Cow position: chr3:69933124-69932664 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 271

Conread position: 1-464
Cow position: chr3:72629795-72629319 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 271

Conread position: 1-489
Cow position: chr3:30314287-30313749 (view UCSC Genome Browser custom track)
Alignm length: 540
Alignm identity: 364
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 43, 409

Conread position: 1-489
Cow position: chr3:40823115-40822591 (view UCSC Genome Browser custom track)
Alignm length: 527
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 279

Conread position: 1-489
Cow position: chr3:59861092-59860583 (view UCSC Genome Browser custom track)
Alignm length: 520
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 274

Conread position: 1-504
Cow position: chr3:75041436-75041944 (view UCSC Genome Browser custom track)
Alignm length: 525
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 89

Conread position: 1-504
Cow position: chr3:78027684-78028210 (view UCSC Genome Browser custom track)
Alignm length: 537
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 275

Conread position: 1-517
Cow position: chr3:13513474-13513976 (view UCSC Genome Browser custom track)
Alignm length: 534
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 74

Conread position: 1-538
Cow position: chr3:2711231-2711785 (view UCSC Genome Browser custom track)
Alignm length: 571
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 293

Conread position: 1-539
Cow position: chr3:10239376-10238821 (view UCSC Genome Browser custom track)
Alignm length: 573
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 18

Conread position: 1-539
Cow position: chr3:23291678-23292235 (view UCSC Genome Browser custom track)
Alignm length: 571
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 273

Conread position: 1-546
Cow position: chr3:2653838-2653293 (view UCSC Genome Browser custom track)
Alignm length: 566
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 119

Conread position: 1-550
Cow position: chr3:18542681-18543273 (view UCSC Genome Browser custom track)
Alignm length: 600
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 383

Conread position: 1-556
Cow position: chr3:207433-207983 (view UCSC Genome Browser custom track)
Alignm length: 574
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 206

Conread position: 1-556
Cow position: chr3:31354526-31355071 (view UCSC Genome Browser custom track)
Alignm length: 575
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 90

Conread position: 1-556
Cow position: chr3:34396330-34396876 (view UCSC Genome Browser custom track)
Alignm length: 568
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 83

Conread position: 1-556
Cow position: chr3:42580238-42580779 (view UCSC Genome Browser custom track)
Alignm length: 575
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 207

Conread position: 1-558
Cow position: chr3:5047457-5048009 (view UCSC Genome Browser custom track)
Alignm length: 578
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 208

Conread position: 1-558
Cow position: chr3:5829902-5830452 (view UCSC Genome Browser custom track)
Alignm length: 571
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 120

Conread position: 1-558
Cow position: chr3:55229967-55230532 (view UCSC Genome Browser custom track)
Alignm length: 579
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 114

Conread position: 1-558
Cow position: chr3:77474489-77473960 (view UCSC Genome Browser custom track)
Alignm length: 573
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 155

Conread position: 1-559
Cow position: chr3:18811229-18810654 (view UCSC Genome Browser custom track)
Alignm length: 591
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 25

Conread position: 1-559
Cow position: chr3:21182958-21183527 (view UCSC Genome Browser custom track)
Alignm length: 591
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 17

Conread position: 1-559
Cow position: chr3:34031170-34031748 (view UCSC Genome Browser custom track)
Alignm length: 594
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 289

Conread position: 1-559
Cow position: chr3:43039965-43040535 (view UCSC Genome Browser custom track)
Alignm length: 589
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 273

Conread position: 1-559
Cow position: chr3:47273242-47273808 (view UCSC Genome Browser custom track)
Alignm length: 588
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 17

Conread position: 1-559
Cow position: chr3:56650538-56651105 (view UCSC Genome Browser custom track)
Alignm length: 584
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 25

Conread position: 1-559
Cow position: chr3:64017637-64018218 (view UCSC Genome Browser custom track)
Alignm length: 595
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 273

Conread position: 1-561
Cow position: chr3:5954460-5955021 (view UCSC Genome Browser custom track)
Alignm length: 587
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 105

Conread position: 1-571
Cow position: chr3:56340693-56341307 (view UCSC Genome Browser custom track)
Alignm length: 618
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 399

Conread position: 1-591
Cow position: chr3:2909367-2909949 (view UCSC Genome Browser custom track)
Alignm length: 610
Alignm identity: 447
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 35

Conread position: 1-591
Cow position: chr3:52865022-52865637 (view UCSC Genome Browser custom track)
Alignm length: 619
Alignm identity: 484
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 392

Conread position: 1-591
Cow position: chr3:63005422-63006044 (view UCSC Genome Browser custom track)
Alignm length: 624
Alignm identity: 461
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 105

Conread position: 1-592
Cow position: chr3:39326417-39325814 (view UCSC Genome Browser custom track)
Alignm length: 616
Alignm identity: 479
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 239

Conread position: 1-593
Cow position: chr3:3522741-3522097 (view UCSC Genome Browser custom track)
Alignm length: 647
Alignm identity: 419
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 43, 597

Conread position: 1-593
Cow position: chr3:14440002-14440641 (view UCSC Genome Browser custom track)
Alignm length: 641
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 463

Conread position: 1-593
Cow position: chr3:19802150-19801538 (view UCSC Genome Browser custom track)
Alignm length: 621
Alignm identity: 476
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 159

Conread position: 1-593
Cow position: chr3:47081931-47082560 (view UCSC Genome Browser custom track)
Alignm length: 639
Alignm identity: 418
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 34, 93

Conread position: 2-198
Cow position: chr3:56321036-56320828 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 149
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 41, 0

Conread position: 2-215
Cow position: chr3:6782116-6781886 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 166
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 42, 0

Conread position: 2-268
Cow position: chr3:32623283-32623566 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 199
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 42, 84

Conread position: 2-275
Cow position: chr3:17828921-17829216 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 210
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 42, 291

Conread position: 2-275
Cow position: chr3:32146359-32146652 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 207
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 42, 289

Conread position: 2-324
Cow position: chr3:70083918-70084241 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 250
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 42, 116

Conread position: 2-445
Cow position: chr3:57499788-57500258 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 184

Conread position: 2-544
Cow position: chr3:40340235-40340830 (view UCSC Genome Browser custom track)
Alignm length: 596
Alignm identity: 394
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 42, 0

Conread position: 2-559
Cow position: chr3:48061101-48061679 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 269

Conread position: 2-562
Cow position: chr3:42431958-42431365 (view UCSC Genome Browser custom track)
Alignm length: 600
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 158

Conread position: 2-593
Cow position: chr3:36117388-36116750 (view UCSC Genome Browser custom track)
Alignm length: 642
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 532

Conread position: 2-593
Cow position: chr3:64028357-64029001 (view UCSC Genome Browser custom track)
Alignm length: 646
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 374

Conread position: 3-559
Cow position: chr3:66618908-66618358 (view UCSC Genome Browser custom track)
Alignm length: 576
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 194

Conread position: 3-593
Cow position: chr3:19938638-19938006 (view UCSC Genome Browser custom track)
Alignm length: 638
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 373

Conread position: 4-194
Cow position: chr3:19943788-19943599 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 143
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 12, 49

Conread position: 4-429
Cow position: chr3:15178035-15177600 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 71

Conread position: 4-539
Cow position: chr3:36882189-36882739 (view UCSC Genome Browser custom track)
Alignm length: 565
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 6

Conread position: 4-587
Cow position: chr3:49677483-49676869 (view UCSC Genome Browser custom track)
Alignm length: 618
Alignm identity: 460
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 66

Conread position: 6-185
Cow position: chr3:54864975-54865152 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 137
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 39, 85

Conread position: 6-558
Cow position: chr3:9716533-9715979 (view UCSC Genome Browser custom track)
Alignm length: 573
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 188

Conread position: 7-189
Cow position: chr3:14588403-14588213 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 143
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 28, 110

Conread position: 7-449
Cow position: chr3:24591890-24592345 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 76

Conread position: 8-265
Cow position: chr3:48231262-48231528 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 86

Conread position: 8-558
Cow position: chr3:31898252-31898787 (view UCSC Genome Browser custom track)
Alignm length: 568
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 153

Conread position: 10-538
Cow position: chr3:594307-593770 (view UCSC Genome Browser custom track)
Alignm length: 554
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 151

Conread position: 31-435
Cow position: chr3:36691497-36691895 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 175

Conread position: 38-219
Cow position: chr3:36127073-36126895 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 138
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 142, 9

Conread position: 42-344
Cow position: chr3:3980068-3979751 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 91

Conread position: 42-416
Cow position: chr3:83234412-83234792 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 242
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 55, 73

Conread position: 42-440
Cow position: chr3:83700467-83700858 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 272
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 140, 19

Conread position: 42-444
Cow position: chr3:58208416-58208814 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 280
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 45, 60

Conread position: 42-448
Cow position: chr3:14634420-14634822 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 48

Conread position: 42-508
Cow position: chr3:3054291-3053831 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 160

Conread position: 42-558
Cow position: chr3:2633607-2633096 (view UCSC Genome Browser custom track)
Alignm length: 532
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 160

Conread position: 42-593
Cow position: chr3:24359940-24359379 (view UCSC Genome Browser custom track)
Alignm length: 577
Alignm identity: 373
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 50, 244

Conread position: 42-593
Cow position: chr3:37968763-37968172 (view UCSC Genome Browser custom track)
Alignm length: 593
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 359

Conread position: 43-439
Cow position: chr3:49308999-49309385 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 264
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 38, 102

Conread position: 43-449
Cow position: chr3:32842756-32843164 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 287
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 43, 26

Conread position: 43-455
Cow position: chr3:18357201-18357615 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 273
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 31, 157

Conread position: 46-449
Cow position: chr3:36099040-36099446 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 37

Conread position: 51-562
Cow position: chr3:46502704-46502170 (view UCSC Genome Browser custom track)
Alignm length: 545
Alignm identity: 359
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 41, 97

Conread position: 56-556
Cow position: chr3:66637711-66637218 (view UCSC Genome Browser custom track)
Alignm length: 515
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 146

Conread position: 65-589
Cow position: chr3:17951314-17950783 (view UCSC Genome Browser custom track)
Alignm length: 542
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 41

Conread position: 69-449
Cow position: chr3:14754840-14755232 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 277
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 17, 59

Conread position: 70-389
Cow position: chr3:18464099-18464435 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 314

Conread position: 73-593
Cow position: chr3:22335517-22334981 (view UCSC Genome Browser custom track)
Alignm length: 543
Alignm identity: 344
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 12, 41

Conread position: 78-593
Cow position: chr3:7159169-7159695 (view UCSC Genome Browser custom track)
Alignm length: 535
Alignm identity: 332
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 89, 29

Conread position: 79-275
Cow position: chr3:7159148-7159350 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 146
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 99, 21

Conread position: 87-442
Cow position: chr3:52861501-52861148 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 246
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 8, 53

Conread position: 87-449
Cow position: chr3:80871364-80871003 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 242
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 11, 171

Conread position: 94-489
Cow position: chr3:53515354-53514948 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 169

Conread position: 125-558
Cow position: chr3:69211795-69212203 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 298
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 56, 35

Conread position: 150-593
Cow position: chr3:15989505-15989945 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 289
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 162, 35

Conread position: 154-462
Cow position: chr3:43193143-43193458 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 233
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 29, 126

Conread position: 156-556
Cow position: chr3:44255415-44255804 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 40

Conread position: 159-593
Cow position: chr3:41212224-41212665 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 286
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 78, 27

Conread position: 178-450
Cow position: chr3:54865175-54865449 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 191
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 43, 10

Conread position: 196-449
Cow position: chr3:27905755-27905999 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 188
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 61, 27

Conread position: 203-593
Cow position: chr3:32623521-32623923 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 48

Conread position: 217-449
Cow position: chr3:48329909-48329679 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 166
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 97, 75

Conread position: 226-593
Cow position: chr3:2369700-2370077 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 244
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 13, 145

Conread position: 229-587
Cow position: chr3:50148164-50147797 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 235
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 10, 142

Conread position: 229-593
Cow position: chr3:6781580-6781206 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 255
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 10, 137

Conread position: 236-449
Cow position: chr3:26948811-26948592 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 158
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 10, 107

Conread position: 265-444
Cow position: chr3:50011860-50011677 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 142
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 48, 73

Conread position: 267-593
Cow position: chr3:49614559-49614890 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 222
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 45, 6

Conread position: 271-455
Cow position: chr3:56320296-56320113 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 134
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 43, 79

Conread position: 271-593
Cow position: chr3:46861889-46862216 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 219
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 40, 92

Conread position: 271-593
Cow position: chr3:47616509-47616838 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 218
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 41, 96

Conread position: 271-593
Cow position: chr3:72704607-72704280 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 218
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 41, 96

Conread position: 278-428
Cow position: chr3:66805238-66805086 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 117
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 15, 8

Conread position: 278-556
Cow position: chr3:471781-471504 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 200
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 36, 94

Conread position: 278-593
Cow position: chr3:48841053-48840733 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 218
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 36, 89

Conread position: 279-593
Cow position: chr3:17829245-17829561 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 204
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 165, 60

Conread position: 280-593
Cow position: chr3:46678512-46678831 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 221
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 35, 87

Conread position: 286-449
Cow position: chr3:60210710-60210875 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 122
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 36, 82

Conread position: 297-591
Cow position: chr3:48231521-48231815 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 223
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 17, 39

Conread position: 335-593
Cow position: chr3:47741436-47741697 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 174
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 104, 29

Conread position: 340-588
Cow position: chr3:3907566-3907817 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 190
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 104, 28

Conread position: 352-600
Cow position: chr3:58947053-58946813 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 183
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 158, 61

Conread position: 425-591
Cow position: chr3:15054815-15054984 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 131
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 26, 56

Show alignments to all cow chromosomes.