Cow genome map

Conread name: Lym2-sn39_F12.f

Conread position: 1-193
Cow position:
Alignm length: 214
Alignm identity: 157
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 43, 0

Conread position: 1-214
Cow position:
Alignm length: 231
Alignm identity: 177
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 43, 0

Conread position: 1-268
Cow position:
Alignm length: 289
Alignm identity: 202
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 43, 0

Conread position: 1-268
Cow position:
Alignm length: 291
Alignm identity: 208
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 43, 0

Conread position: 1-275
Cow position:
Alignm length: 297
Alignm identity: 208
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 43, 291

Conread position: 1-275
Cow position:
Alignm length: 298
Alignm identity: 214
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 43, 292

Conread position: 1-277
Cow position:
Alignm length: 304
Alignm identity: 211
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 43, 293

Conread position: 1-286
Cow position:
Alignm length: 303
Alignm identity: 212
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 43, 93

Conread position: 1-286
Cow position:
Alignm length: 308
Alignm identity: 218
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 43, 291

Conread position: 1-428
Cow position:
Alignm length: 445
Alignm identity: 305
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 34, 28

Conread position: 1-428
Cow position:
Alignm length: 449
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 127

Conread position: 1-438
Cow position:
Alignm length: 457
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 24

Conread position: 1-440
Cow position:
Alignm length: 453
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 28

Conread position: 1-441
Cow position:
Alignm length: 468
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 162

Conread position: 1-444
Cow position:
Alignm length: 468
Alignm identity: 311
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 43, 93

Conread position: 1-444
Cow position:
Alignm length: 469
Alignm identity: 313
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 43, 93

Conread position: 1-449
Cow position:
Alignm length: 462
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 25

Conread position: 1-464
Cow position:
Alignm length: 494
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 272

Conread position: 1-504
Cow position:
Alignm length: 534
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 271

Conread position: 1-530
Cow position:
Alignm length: 563
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 17

Conread position: 1-530
Cow position:
Alignm length: 557
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 243

Conread position: 1-530
Cow position:
Alignm length: 563
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 88

Conread position: 1-535
Cow position:
Alignm length: 558
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 62

Conread position: 1-538
Cow position:
Alignm length: 573
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 289

Conread position: 1-539
Cow position:
Alignm length: 567
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 243

Conread position: 1-541
Cow position:
Alignm length: 574
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 275

Conread position: 1-555
Cow position:
Alignm length: 561
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 37

Conread position: 1-558
Cow position:
Alignm length: 579
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 166

Conread position: 1-559
Cow position:
Alignm length: 593
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 277

Conread position: 1-559
Cow position:
Alignm length: 597
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 281

Conread position: 1-559
Cow position:
Alignm length: 591
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 265

Conread position: 1-559
Cow position:
Alignm length: 594
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 275

Conread position: 1-590
Cow position:
Alignm length: 619
Alignm identity: 454
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 66

Conread position: 1-590
Cow position:
Alignm length: 616
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 93

Conread position: 1-592
Cow position:
Alignm length: 638
Alignm identity: 411
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 43, 522

Conread position: 1-592
Cow position:
Alignm length: 638
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 110

Conread position: 1-593
Cow position:
Alignm length: 626
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 292

Conread position: 1-593
Cow position:
Alignm length: 626
Alignm identity: 398
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 43, 338

Conread position: 1-593
Cow position:
Alignm length: 630
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 15

Conread position: 2-504
Cow position:
Alignm length: 535
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 288

Conread position: 2-538
Cow position:
Alignm length: 564
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 27

Conread position: 2-539
Cow position:
Alignm length: 574
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 275

Conread position: 2-541
Cow position:
Alignm length: 569
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 255

Conread position: 2-550
Cow position:
Alignm length: 580
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 274

Conread position: 4-223
Cow position:
Alignm length: 231
Alignm identity: 180
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 33, 22

Conread position: 4-275
Cow position:
Alignm length: 289
Alignm identity: 201
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 40, 8

Conread position: 4-539
Cow position:
Alignm length: 570
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 286

Conread position: 4-591
Cow position:
Alignm length: 612
Alignm identity: 449
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 178

Conread position: 5-290
Cow position:
Alignm length: 307
Alignm identity: 214
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 32, 133

Conread position: 6-600
Cow position:
Alignm length: 627
Alignm identity: 457
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 163

Conread position: 8-428
Cow position:
Alignm length: 442
Alignm identity: 292
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 20, 157

Conread position: 8-440
Cow position:
Alignm length: 440
Alignm identity: 280
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 75, 104

Conread position: 11-449
Cow position:
Alignm length: 463
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 235

Conread position: 31-511
Cow position:
Alignm length: 498
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 196

Conread position: 42-177
Cow position:
Alignm length: 138
Alignm identity: 113
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 68, 0

Conread position: 42-285
Cow position:
Alignm length: 260
Alignm identity: 180
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 50, 244

Conread position: 42-436
Cow position:
Alignm length: 407
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 196

Conread position: 42-587
Cow position:
Alignm length: 581
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 353

Conread position: 46-447
Cow position:
Alignm length: 425
Alignm identity: 281
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 48, 78

Conread position: 47-428
Cow position:
Alignm length: 399
Alignm identity: 257
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 43, 175

Conread position: 66-444
Cow position:
Alignm length: 411
Alignm identity: 290
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 33, 332

Conread position: 68-398
Cow position:
Alignm length: 335
Alignm identity: 208
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 112, 14

Conread position: 217-592
Cow position:
Alignm length: 383
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 153

Conread position: 229-592
Cow position:
Alignm length: 376
Alignm identity: 243
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 10, 142

Conread position: 229-593
Cow position:
Alignm length: 376
Alignm identity: 250
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 10, 142

Conread position: 263-593
Cow position:
Alignm length: 337
Alignm identity: 223
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 50, 8

Conread position: 271-544
Cow position:
Alignm length: 281
Alignm identity: 193
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 43, 92

Conread position: 271-593
Cow position:
Alignm length: 333
Alignm identity: 225
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 43, 107

Conread position: 271-593
Cow position:
Alignm length: 331
Alignm identity: 221
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 43, 96

Conread position: 271-600
Cow position:
Alignm length: 340
Alignm identity: 220
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 35, 97

Conread position: 361-593
Cow position:
Alignm length: 237
Alignm identity: 154
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 81, 0

Show alignments to all cow chromosomes.