Cow genome map

Conread name: Lym2-sn39_F12.f

Conread position: 1-179
Cow position:
Alignm length: 192
Alignm identity: 151
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 43, 0

Conread position: 1-194
Cow position:
Alignm length: 213
Alignm identity: 160
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 43, 0

Conread position: 1-217
Cow position:
Alignm length: 234
Alignm identity: 168
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 43, 0

Conread position: 1-217
Cow position:
Alignm length: 234
Alignm identity: 173
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 43, 0

Conread position: 1-229
Cow position:
Alignm length: 242
Alignm identity: 188
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 36, 207

Conread position: 1-230
Cow position:
Alignm length: 238
Alignm identity: 176
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 28, 94

Conread position: 1-268
Cow position:
Alignm length: 286
Alignm identity: 206
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 43, 108

Conread position: 1-268
Cow position:
Alignm length: 290
Alignm identity: 203
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 43, 0

Conread position: 1-275
Cow position:
Alignm length: 290
Alignm identity: 211
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 43, 108

Conread position: 1-275
Cow position:
Alignm length: 298
Alignm identity: 212
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 43, 289

Conread position: 1-275
Cow position:
Alignm length: 297
Alignm identity: 214
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 43, 291

Conread position: 1-275
Cow position:
Alignm length: 295
Alignm identity: 211
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 43, 289

Conread position: 1-275
Cow position:
Alignm length: 298
Alignm identity: 208
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 36, 292

Conread position: 1-275
Cow position:
Alignm length: 295
Alignm identity: 209
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 43, 72

Conread position: 1-286
Cow position:
Alignm length: 307
Alignm identity: 225
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 43, 290

Conread position: 1-286
Cow position:
Alignm length: 306
Alignm identity: 222
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 31, 289

Conread position: 1-315
Cow position:
Alignm length: 328
Alignm identity: 225
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 179, 81

Conread position: 1-371
Cow position:
Alignm length: 394
Alignm identity: 259
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 42, 81

Conread position: 1-402
Cow position:
Alignm length: 421
Alignm identity: 282
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 43, 87

Conread position: 1-420
Cow position:
Alignm length: 442
Alignm identity: 293
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 33, 138

Conread position: 1-426
Cow position:
Alignm length: 452
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 275

Conread position: 1-432
Cow position:
Alignm length: 455
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 168

Conread position: 1-444
Cow position:
Alignm length: 471
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 289

Conread position: 1-449
Cow position:
Alignm length: 475
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 17

Conread position: 1-449
Cow position:
Alignm length: 471
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 17

Conread position: 1-464
Cow position:
Alignm length: 494
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 163

Conread position: 1-504
Cow position:
Alignm length: 531
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 238

Conread position: 1-504
Cow position:
Alignm length: 535
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 271

Conread position: 1-505
Cow position:
Alignm length: 523
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 203

Conread position: 1-530
Cow position:
Alignm length: 560
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 64

Conread position: 1-530
Cow position:
Alignm length: 573
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 159

Conread position: 1-530
Cow position:
Alignm length: 581
Alignm identity: 383
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 43, 143

Conread position: 1-538
Cow position:
Alignm length: 563
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 243

Conread position: 1-541
Cow position:
Alignm length: 569
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 263

Conread position: 1-556
Cow position:
Alignm length: 576
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 204

Conread position: 1-556
Cow position:
Alignm length: 576
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 173

Conread position: 1-556
Cow position:
Alignm length: 573
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 208

Conread position: 1-558
Cow position:
Alignm length: 566
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 40

Conread position: 1-558
Cow position:
Alignm length: 571
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 74

Conread position: 1-558
Cow position:
Alignm length: 575
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 190

Conread position: 1-559
Cow position:
Alignm length: 596
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 274

Conread position: 1-559
Cow position:
Alignm length: 587
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 270

Conread position: 1-559
Cow position:
Alignm length: 591
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 243

Conread position: 1-559
Cow position:
Alignm length: 587
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 243

Conread position: 1-559
Cow position:
Alignm length: 586
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 232

Conread position: 1-559
Cow position:
Alignm length: 592
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 275

Conread position: 1-559
Cow position:
Alignm length: 590
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 17

Conread position: 1-587
Cow position:
Alignm length: 634
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 0

Conread position: 1-590
Cow position:
Alignm length: 639
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 604

Conread position: 1-591
Cow position:
Alignm length: 632
Alignm identity: 474
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 145

Conread position: 1-593
Cow position:
Alignm length: 649
Alignm identity: 420
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 43, 356

Conread position: 1-593
Cow position:
Alignm length: 652
Alignm identity: 426
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 42, 617

Conread position: 1-593
Cow position:
Alignm length: 649
Alignm identity: 419
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 43, 358

Conread position: 1-595
Cow position:
Alignm length: 624
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 174

Conread position: 1-600
Cow position:
Alignm length: 631
Alignm identity: 484
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 232

Conread position: 2-275
Cow position:
Alignm length: 297
Alignm identity: 209
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 42, 291

Conread position: 2-275
Cow position:
Alignm length: 303
Alignm identity: 210
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 42, 297

Conread position: 2-426
Cow position:
Alignm length: 451
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 288

Conread position: 2-451
Cow position:
Alignm length: 474
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 215

Conread position: 2-463
Cow position:
Alignm length: 493
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 157

Conread position: 2-593
Cow position:
Alignm length: 639
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 214

Conread position: 2-593
Cow position:
Alignm length: 640
Alignm identity: 415
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 8, 406

Conread position: 3-275
Cow position:
Alignm length: 290
Alignm identity: 207
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 41, 284

Conread position: 3-449
Cow position:
Alignm length: 470
Alignm identity: 314
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 31, 73

Conread position: 3-556
Cow position:
Alignm length: 566
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 201

Conread position: 3-591
Cow position:
Alignm length: 607
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 33

Conread position: 4-183
Cow position:
Alignm length: 189
Alignm identity: 143
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 30, 0

Conread position: 4-275
Cow position:
Alignm length: 286
Alignm identity: 209
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 40, 8

Conread position: 4-343
Cow position:
Alignm length: 358
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 82

Conread position: 4-430
Cow position:
Alignm length: 444
Alignm identity: 278
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 34, 9

Conread position: 4-591
Cow position:
Alignm length: 621
Alignm identity: 467
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 64

Conread position: 4-593
Cow position:
Alignm length: 616
Alignm identity: 462
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 6

Conread position: 6-357
Cow position:
Alignm length: 372
Alignm identity: 247
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 37, 88

Conread position: 6-437
Cow position:
Alignm length: 452
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 20

Conread position: 6-449
Cow position:
Alignm length: 461
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 74

Conread position: 6-449
Cow position:
Alignm length: 459
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 81

Conread position: 6-554
Cow position:
Alignm length: 565
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 199

Conread position: 6-599
Cow position:
Alignm length: 619
Alignm identity: 470
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 100

Conread position: 8-445
Cow position:
Alignm length: 453
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 83

Conread position: 10-267
Cow position:
Alignm length: 275
Alignm identity: 170
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 82, 0

Conread position: 10-444
Cow position:
Alignm length: 449
Alignm identity: 282
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 36, 165

Conread position: 28-579
Cow position:
Alignm length: 570
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 144

Conread position: 42-247
Cow position:
Alignm length: 215
Alignm identity: 162
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 47, 0

Conread position: 42-313
Cow position:
Alignm length: 285
Alignm identity: 192
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 50, 94

Conread position: 42-535
Cow position:
Alignm length: 518
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 28

Conread position: 42-551
Cow position:
Alignm length: 522
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 21

Conread position: 42-593
Cow position:
Alignm length: 596
Alignm identity: 390
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 63, 27

Conread position: 43-286
Cow position:
Alignm length: 262
Alignm identity: 187
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 45, 221

Conread position: 43-440
Cow position:
Alignm length: 408
Alignm identity: 270
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 138, 40

Conread position: 43-591
Cow position:
Alignm length: 568
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 125

Conread position: 46-449
Cow position:
Alignm length: 424
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 268

Conread position: 57-451
Cow position:
Alignm length: 419
Alignm identity: 261
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 41, 415

Conread position: 61-437
Cow position:
Alignm length: 391
Alignm identity: 260
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 42, 10

Conread position: 63-593
Cow position:
Alignm length: 553
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 26

Conread position: 79-491
Cow position:
Alignm length: 419
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 36

Conread position: 81-449
Cow position:
Alignm length: 380
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 96

Conread position: 115-591
Cow position:
Alignm length: 494
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 47

Conread position: 123-551
Cow position:
Alignm length: 448
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 212

Conread position: 124-558
Cow position:
Alignm length: 440
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 188, 69

Conread position: 134-556
Cow position:
Alignm length: 430
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 62

Conread position: 148-449
Cow position:
Alignm length: 310
Alignm identity: 211
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 33, 21

Conread position: 151-593
Cow position:
Alignm length: 451
Alignm identity: 284
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 161, 29

Conread position: 159-593
Cow position:
Alignm length: 442
Alignm identity: 292
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 155, 27

Conread position: 170-593
Cow position:
Alignm length: 444
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 208

Conread position: 173-539
Cow position:
Alignm length: 382
Alignm identity: 259
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 24, 88

Conread position: 174-530
Cow position:
Alignm length: 379
Alignm identity: 250
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 10, 106

Conread position: 186-591
Cow position:
Alignm length: 432
Alignm identity: 288
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 11, 97

Conread position: 196-449
Cow position:
Alignm length: 259
Alignm identity: 181
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 27, 175

Conread position: 216-478
Cow position:
Alignm length: 265
Alignm identity: 186
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 228, 54

Conread position: 219-559
Cow position:
Alignm length: 351
Alignm identity: 234
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 95, 51

Conread position: 228-592
Cow position:
Alignm length: 376
Alignm identity: 254
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 11, 143

Conread position: 229-582
Cow position:
Alignm length: 366
Alignm identity: 239
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 10, 69

Conread position: 229-593
Cow position:
Alignm length: 377
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 143

Conread position: 235-599
Cow position:
Alignm length: 374
Alignm identity: 244
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 35, 19

Conread position: 240-556
Cow position:
Alignm length: 324
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 134

Conread position: 271-447
Cow position:
Alignm length: 180
Alignm identity: 132
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 43, 92

Conread position: 271-593
Cow position:
Alignm length: 330
Alignm identity: 210
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 41, 72

Conread position: 271-593
Cow position:
Alignm length: 330
Alignm identity: 220
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 41, 96

Conread position: 271-593
Cow position:
Alignm length: 329
Alignm identity: 218
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 41, 96

Conread position: 271-593
Cow position:
Alignm length: 332
Alignm identity: 219
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 31, 22

Conread position: 282-593
Cow position:
Alignm length: 319
Alignm identity: 216
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 32, 85

Show alignments to all cow chromosomes.