Cow genome map

Conread name: Lym2-sn39_F12.f

Conread position: 1-194
Cow position:
Alignm length: 208
Alignm identity: 159
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 43, 0

Conread position: 1-208
Cow position:
Alignm length: 216
Alignm identity: 157
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 27, 0

Conread position: 1-214
Cow position:
Alignm length: 232
Alignm identity: 181
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 31, 0

Conread position: 1-221
Cow position:
Alignm length: 238
Alignm identity: 179
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 28, 0

Conread position: 1-229
Cow position:
Alignm length: 246
Alignm identity: 181
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 33, 0

Conread position: 1-268
Cow position:
Alignm length: 287
Alignm identity: 199
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 43, 0

Conread position: 1-268
Cow position:
Alignm length: 291
Alignm identity: 209
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 43, 0

Conread position: 1-275
Cow position:
Alignm length: 293
Alignm identity: 206
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 34, 0

Conread position: 1-275
Cow position:
Alignm length: 298
Alignm identity: 215
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 43, 159

Conread position: 1-275
Cow position:
Alignm length: 298
Alignm identity: 215
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 43, 292

Conread position: 1-275
Cow position:
Alignm length: 298
Alignm identity: 209
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 43, 292

Conread position: 1-275
Cow position:
Alignm length: 299
Alignm identity: 213
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 43, 293

Conread position: 1-275
Cow position:
Alignm length: 296
Alignm identity: 213
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 43, 290

Conread position: 1-275
Cow position:
Alignm length: 300
Alignm identity: 222
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 43, 154

Conread position: 1-275
Cow position:
Alignm length: 287
Alignm identity: 195
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 34, 131

Conread position: 1-275
Cow position:
Alignm length: 293
Alignm identity: 208
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 43, 287

Conread position: 1-275
Cow position:
Alignm length: 288
Alignm identity: 214
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 42, 207

Conread position: 1-289
Cow position:
Alignm length: 301
Alignm identity: 219
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 43, 108

Conread position: 1-325
Cow position:
Alignm length: 335
Alignm identity: 242
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 33, 120

Conread position: 1-438
Cow position:
Alignm length: 457
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 242

Conread position: 1-440
Cow position:
Alignm length: 457
Alignm identity: 290
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 45, 267

Conread position: 1-441
Cow position:
Alignm length: 461
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 17

Conread position: 1-444
Cow position:
Alignm length: 462
Alignm identity: 321
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 40, 108

Conread position: 1-449
Cow position:
Alignm length: 477
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 291

Conread position: 1-451
Cow position:
Alignm length: 474
Alignm identity: 299
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 44, 248

Conread position: 1-456
Cow position:
Alignm length: 485
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 387

Conread position: 1-489
Cow position:
Alignm length: 522
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 156

Conread position: 1-505
Cow position:
Alignm length: 547
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 403

Conread position: 1-507
Cow position:
Alignm length: 539
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 155

Conread position: 1-513
Cow position:
Alignm length: 553
Alignm identity: 364
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 43, 372

Conread position: 1-530
Cow position:
Alignm length: 556
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 17

Conread position: 1-538
Cow position:
Alignm length: 570
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 275

Conread position: 1-539
Cow position:
Alignm length: 564
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 45

Conread position: 1-539
Cow position:
Alignm length: 567
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 17

Conread position: 1-539
Cow position:
Alignm length: 564
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 157

Conread position: 1-556
Cow position:
Alignm length: 570
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 160

Conread position: 1-559
Cow position:
Alignm length: 588
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 17

Conread position: 1-559
Cow position:
Alignm length: 589
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 171

Conread position: 1-559
Cow position:
Alignm length: 590
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 273

Conread position: 1-559
Cow position:
Alignm length: 580
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 11

Conread position: 1-559
Cow position:
Alignm length: 589
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 283

Conread position: 1-559
Cow position:
Alignm length: 594
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 162

Conread position: 1-559
Cow position:
Alignm length: 588
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 190

Conread position: 1-559
Cow position:
Alignm length: 593
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 145

Conread position: 1-559
Cow position:
Alignm length: 588
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 243

Conread position: 1-559
Cow position:
Alignm length: 590
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 156

Conread position: 1-559
Cow position:
Alignm length: 599
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 293

Conread position: 1-590
Cow position:
Alignm length: 621
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 156

Conread position: 1-591
Cow position:
Alignm length: 623
Alignm identity: 485
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 83

Conread position: 1-593
Cow position:
Alignm length: 634
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 348

Conread position: 1-593
Cow position:
Alignm length: 638
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 110

Conread position: 1-593
Cow position:
Alignm length: 641
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 253

Conread position: 1-593
Cow position:
Alignm length: 646
Alignm identity: 417
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 43, 0

Conread position: 1-593
Cow position:
Alignm length: 626
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 162

Conread position: 2-219
Cow position:
Alignm length: 236
Alignm identity: 174
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 33, 10

Conread position: 2-268
Cow position:
Alignm length: 285
Alignm identity: 198
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 41, 194

Conread position: 2-276
Cow position:
Alignm length: 293
Alignm identity: 208
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 42, 18

Conread position: 2-426
Cow position:
Alignm length: 446
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 242

Conread position: 2-489
Cow position:
Alignm length: 516
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 158

Conread position: 2-503
Cow position:
Alignm length: 543
Alignm identity: 355
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 32, 183

Conread position: 2-593
Cow position:
Alignm length: 611
Alignm identity: 297
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 50, 378

Conread position: 2-593
Cow position:
Alignm length: 650
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 362

Conread position: 3-194
Cow position:
Alignm length: 204
Alignm identity: 149
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 41, 0

Conread position: 3-268
Cow position:
Alignm length: 290
Alignm identity: 207
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 41, 0

Conread position: 3-427
Cow position:
Alignm length: 463
Alignm identity: 309
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 7, 23

Conread position: 3-562
Cow position:
Alignm length: 589
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 273

Conread position: 4-428
Cow position:
Alignm length: 455
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 60

Conread position: 4-538
Cow position:
Alignm length: 567
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 8

Conread position: 4-539
Cow position:
Alignm length: 564
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 158

Conread position: 4-558
Cow position:
Alignm length: 576
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 151

Conread position: 4-593
Cow position:
Alignm length: 623
Alignm identity: 456
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 80

Conread position: 6-513
Cow position:
Alignm length: 532
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 209

Conread position: 6-558
Cow position:
Alignm length: 583
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 23

Conread position: 6-590
Cow position:
Alignm length: 616
Alignm identity: 463
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 68

Conread position: 8-556
Cow position:
Alignm length: 569
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 176

Conread position: 8-593
Cow position:
Alignm length: 609
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 200

Conread position: 28-358
Cow position:
Alignm length: 350
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 265

Conread position: 30-426
Cow position:
Alignm length: 414
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 236

Conread position: 31-443
Cow position:
Alignm length: 433
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 149

Conread position: 38-446
Cow position:
Alignm length: 423
Alignm identity: 277
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 60, 11

Conread position: 42-206
Cow position:
Alignm length: 177
Alignm identity: 135
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 59, 113

Conread position: 42-206
Cow position:
Alignm length: 169
Alignm identity: 129
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 138, 46

Conread position: 42-428
Cow position:
Alignm length: 406
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 31

Conread position: 42-538
Cow position:
Alignm length: 517
Alignm identity: 346
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 139, 54

Conread position: 42-593
Cow position:
Alignm length: 599
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 256

Conread position: 46-240
Cow position:
Alignm length: 207
Alignm identity: 154
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 52, 17

Conread position: 51-539
Cow position:
Alignm length: 505
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 214

Conread position: 55-395
Cow position:
Alignm length: 356
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 118

Conread position: 55-556
Cow position:
Alignm length: 515
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 122

Conread position: 69-558
Cow position:
Alignm length: 512
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 20

Conread position: 70-264
Cow position:
Alignm length: 202
Alignm identity: 147
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 29, 129

Conread position: 78-503
Cow position:
Alignm length: 447
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 30

Conread position: 85-449
Cow position:
Alignm length: 371
Alignm identity: 244
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 96, 27

Conread position: 86-451
Cow position:
Alignm length: 371
Alignm identity: 245
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 229, 131

Conread position: 91-423
Cow position:
Alignm length: 344
Alignm identity: 225
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 95, 267

Conread position: 93-437
Cow position:
Alignm length: 357
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 285

Conread position: 108-441
Cow position:
Alignm length: 347
Alignm identity: 239
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 15, 156

Conread position: 154-449
Cow position:
Alignm length: 305
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 182

Conread position: 159-593
Cow position:
Alignm length: 447
Alignm identity: 260
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 73, 215

Conread position: 221-581
Cow position:
Alignm length: 373
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 21

Conread position: 229-592
Cow position:
Alignm length: 376
Alignm identity: 243
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 10, 143

Conread position: 271-433
Cow position:
Alignm length: 166
Alignm identity: 121
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 43, 78

Conread position: 271-470
Cow position:
Alignm length: 204
Alignm identity: 141
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 43, 98

Conread position: 271-544
Cow position:
Alignm length: 282
Alignm identity: 192
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 44, 82

Conread position: 271-593
Cow position:
Alignm length: 330
Alignm identity: 223
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 43, 96

Conread position: 271-593
Cow position:
Alignm length: 332
Alignm identity: 214
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 41, 96

Conread position: 271-593
Cow position:
Alignm length: 332
Alignm identity: 224
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 43, 97

Conread position: 271-593
Cow position:
Alignm length: 331
Alignm identity: 216
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 41, 96

Conread position: 360-597
Cow position:
Alignm length: 243
Alignm identity: 178
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 84, 5

Conread position: 455-600
Cow position:
Alignm length: 149
Alignm identity: 113
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 55, 29

Show alignments to all cow chromosomes.