Cow genome map

Conread name: Lym2-sn39_F12.f

Conread position: 1-179
Cow position:
Alignm length: 193
Alignm identity: 151
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 34, 0

Conread position: 1-180
Cow position:
Alignm length: 193
Alignm identity: 147
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 43, 0

Conread position: 1-185
Cow position:
Alignm length: 199
Alignm identity: 153
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 43, 0

Conread position: 1-206
Cow position:
Alignm length: 220
Alignm identity: 167
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 44, 17

Conread position: 1-219
Cow position:
Alignm length: 241
Alignm identity: 182
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 43, 0

Conread position: 1-225
Cow position:
Alignm length: 239
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 223

Conread position: 1-231
Cow position:
Alignm length: 249
Alignm identity: 193
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 22, 0

Conread position: 1-268
Cow position:
Alignm length: 289
Alignm identity: 206
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 31, 0

Conread position: 1-275
Cow position:
Alignm length: 298
Alignm identity: 209
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 43, 218

Conread position: 1-275
Cow position:
Alignm length: 299
Alignm identity: 206
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 43, 132

Conread position: 1-275
Cow position:
Alignm length: 298
Alignm identity: 217
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 43, 292

Conread position: 1-275
Cow position:
Alignm length: 298
Alignm identity: 212
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 43, 292

Conread position: 1-275
Cow position:
Alignm length: 298
Alignm identity: 213
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 43, 292

Conread position: 1-275
Cow position:
Alignm length: 297
Alignm identity: 207
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 43, 291

Conread position: 1-286
Cow position:
Alignm length: 308
Alignm identity: 221
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 43, 291

Conread position: 1-286
Cow position:
Alignm length: 302
Alignm identity: 217
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 43, 111

Conread position: 1-323
Cow position:
Alignm length: 345
Alignm identity: 249
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 34, 187

Conread position: 1-334
Cow position:
Alignm length: 357
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 152

Conread position: 1-365
Cow position:
Alignm length: 389
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 197

Conread position: 1-407
Cow position:
Alignm length: 426
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 68

Conread position: 1-425
Cow position:
Alignm length: 456
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 216

Conread position: 1-432
Cow position:
Alignm length: 455
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 25

Conread position: 1-440
Cow position:
Alignm length: 454
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 35

Conread position: 1-443
Cow position:
Alignm length: 470
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 276

Conread position: 1-444
Cow position:
Alignm length: 465
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 147

Conread position: 1-444
Cow position:
Alignm length: 461
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 19

Conread position: 1-448
Cow position:
Alignm length: 464
Alignm identity: 303
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 43, 145

Conread position: 1-448
Cow position:
Alignm length: 478
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 28

Conread position: 1-511
Cow position:
Alignm length: 531
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 150

Conread position: 1-515
Cow position:
Alignm length: 549
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 25

Conread position: 1-530
Cow position:
Alignm length: 564
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 275

Conread position: 1-530
Cow position:
Alignm length: 560
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 192

Conread position: 1-536
Cow position:
Alignm length: 559
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 37

Conread position: 1-538
Cow position:
Alignm length: 566
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 274

Conread position: 1-539
Cow position:
Alignm length: 569
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 265

Conread position: 1-556
Cow position:
Alignm length: 569
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 110

Conread position: 1-556
Cow position:
Alignm length: 571
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 208

Conread position: 1-558
Cow position:
Alignm length: 589
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 274

Conread position: 1-558
Cow position:
Alignm length: 572
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 82

Conread position: 1-559
Cow position:
Alignm length: 594
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 275

Conread position: 1-559
Cow position:
Alignm length: 590
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 189

Conread position: 1-559
Cow position:
Alignm length: 588
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 272

Conread position: 1-559
Cow position:
Alignm length: 597
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 25

Conread position: 1-563
Cow position:
Alignm length: 601
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 142

Conread position: 1-591
Cow position:
Alignm length: 608
Alignm identity: 464
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 78

Conread position: 2-395
Cow position:
Alignm length: 420
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 274

Conread position: 2-539
Cow position:
Alignm length: 571
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 299

Conread position: 3-333
Cow position:
Alignm length: 353
Alignm identity: 251
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 9, 141

Conread position: 3-433
Cow position:
Alignm length: 470
Alignm identity: 317
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 41, 396

Conread position: 3-552
Cow position:
Alignm length: 605
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 13

Conread position: 4-286
Cow position:
Alignm length: 306
Alignm identity: 221
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 31, 289

Conread position: 4-343
Cow position:
Alignm length: 365
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 225

Conread position: 4-449
Cow position:
Alignm length: 461
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 14

Conread position: 4-491
Cow position:
Alignm length: 516
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 157

Conread position: 4-538
Cow position:
Alignm length: 562
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 8

Conread position: 4-589
Cow position:
Alignm length: 615
Alignm identity: 453
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 258

Conread position: 5-591
Cow position:
Alignm length: 609
Alignm identity: 441
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 91

Conread position: 6-193
Cow position:
Alignm length: 202
Alignm identity: 161
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 38, 0

Conread position: 6-239
Cow position:
Alignm length: 253
Alignm identity: 201
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 7, 139

Conread position: 6-277
Cow position:
Alignm length: 288
Alignm identity: 215
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 37, 246

Conread position: 6-447
Cow position:
Alignm length: 459
Alignm identity: 297
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 39, 88

Conread position: 6-449
Cow position:
Alignm length: 462
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 89

Conread position: 6-449
Cow position:
Alignm length: 459
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 83

Conread position: 8-428
Cow position:
Alignm length: 447
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 258

Conread position: 8-593
Cow position:
Alignm length: 627
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 86

Conread position: 8-600
Cow position:
Alignm length: 627
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 87

Conread position: 9-222
Cow position:
Alignm length: 237
Alignm identity: 181
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 35, 0

Conread position: 10-416
Cow position:
Alignm length: 429
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 6

Conread position: 31-539
Cow position:
Alignm length: 526
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 26

Conread position: 31-539
Cow position:
Alignm length: 530
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 233

Conread position: 31-562
Cow position:
Alignm length: 555
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 109

Conread position: 36-268
Cow position:
Alignm length: 250
Alignm identity: 175
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 25, 5

Conread position: 36-275
Cow position:
Alignm length: 256
Alignm identity: 178
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 25, 5

Conread position: 42-558
Cow position:
Alignm length: 526
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 46

Conread position: 42-600
Cow position:
Alignm length: 584
Alignm identity: 448
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 345

Conread position: 43-217
Cow position:
Alignm length: 177
Alignm identity: 124
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 132, 44

Conread position: 43-449
Cow position:
Alignm length: 419
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 32

Conread position: 43-449
Cow position:
Alignm length: 418
Alignm identity: 281
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 56, 133

Conread position: 43-449
Cow position:
Alignm length: 416
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 190

Conread position: 46-246
Cow position:
Alignm length: 214
Alignm identity: 150
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 34, 0

Conread position: 46-449
Cow position:
Alignm length: 414
Alignm identity: 259
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 49, 86

Conread position: 47-586
Cow position:
Alignm length: 552
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 49

Conread position: 50-476
Cow position:
Alignm length: 445
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 71

Conread position: 80-600
Cow position:
Alignm length: 535
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 19

Conread position: 86-447
Cow position:
Alignm length: 371
Alignm identity: 241
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 95, 15

Conread position: 89-591
Cow position:
Alignm length: 520
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 287

Conread position: 115-538
Cow position:
Alignm length: 441
Alignm identity: 303
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 65, 148

Conread position: 116-530
Cow position:
Alignm length: 438
Alignm identity: 300
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 64, 166

Conread position: 118-429
Cow position:
Alignm length: 319
Alignm identity: 214
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 63, 144

Conread position: 123-437
Cow position:
Alignm length: 326
Alignm identity: 220
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 57, 106

Conread position: 139-430
Cow position:
Alignm length: 300
Alignm identity: 210
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 42, 58

Conread position: 158-559
Cow position:
Alignm length: 420
Alignm identity: 284
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 23, 121

Conread position: 174-449
Cow position:
Alignm length: 288
Alignm identity: 196
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 22, 105

Conread position: 179-448
Cow position:
Alignm length: 275
Alignm identity: 187
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 17, 115

Conread position: 182-363
Cow position:
Alignm length: 192
Alignm identity: 143
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 14, 105

Conread position: 203-593
Cow position:
Alignm length: 407
Alignm identity: 265
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 21, 173

Conread position: 217-556
Cow position:
Alignm length: 347
Alignm identity: 235
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 19, 54

Conread position: 227-595
Cow position:
Alignm length: 381
Alignm identity: 248
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 31, 52

Conread position: 228-593
Cow position:
Alignm length: 376
Alignm identity: 251
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 31, 70

Conread position: 229-493
Cow position:
Alignm length: 274
Alignm identity: 192
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 10, 142

Conread position: 229-516
Cow position:
Alignm length: 299
Alignm identity: 201
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 10, 142

Conread position: 229-593
Cow position:
Alignm length: 376
Alignm identity: 247
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 10, 142

Conread position: 229-593
Cow position:
Alignm length: 377
Alignm identity: 246
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 10, 142

Conread position: 242-449
Cow position:
Alignm length: 211
Alignm identity: 152
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 70, 123

Conread position: 244-513
Cow position:
Alignm length: 276
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 131

Conread position: 253-578
Cow position:
Alignm length: 337
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 121

Conread position: 256-584
Cow position:
Alignm length: 336
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 11

Conread position: 261-449
Cow position:
Alignm length: 192
Alignm identity: 138
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 61, 111

Conread position: 266-593
Cow position:
Alignm length: 333
Alignm identity: 219
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 46, 5

Conread position: 271-511
Cow position:
Alignm length: 247
Alignm identity: 163
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 43, 96

Conread position: 271-593
Cow position:
Alignm length: 331
Alignm identity: 217
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 41, 92

Conread position: 271-593
Cow position:
Alignm length: 329
Alignm identity: 225
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 43, 93

Conread position: 278-559
Cow position:
Alignm length: 292
Alignm identity: 195
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 36, 90

Conread position: 279-544
Cow position:
Alignm length: 273
Alignm identity: 177
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 33, 88

Conread position: 283-556
Cow position:
Alignm length: 284
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 89

Conread position: 290-600
Cow position:
Alignm length: 324
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 79

Conread position: 311-593
Cow position:
Alignm length: 290
Alignm identity: 194
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 52, 245

Conread position: 320-556
Cow position:
Alignm length: 238
Alignm identity: 162
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 124, 48

Conread position: 460-587
Cow position:
Alignm length: 131
Alignm identity: 102
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 50, 24

Show alignments to all cow chromosomes.