Cow genome map

Conread name: Lym2-sn39_F12.f

Conread position: 1-183
Cow position:
Alignm length: 196
Alignm identity: 150
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 34, 0

Conread position: 1-197
Cow position:
Alignm length: 204
Alignm identity: 155
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 41, 72

Conread position: 1-217
Cow position:
Alignm length: 236
Alignm identity: 174
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 42, 0

Conread position: 1-217
Cow position:
Alignm length: 226
Alignm identity: 167
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 43, 108

Conread position: 1-217
Cow position:
Alignm length: 234
Alignm identity: 170
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 43, 0

Conread position: 1-268
Cow position:
Alignm length: 290
Alignm identity: 201
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 43, 0

Conread position: 1-275
Cow position:
Alignm length: 307
Alignm identity: 211
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 34, 301

Conread position: 1-275
Cow position:
Alignm length: 299
Alignm identity: 218
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 43, 72

Conread position: 1-275
Cow position:
Alignm length: 298
Alignm identity: 203
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 43, 172

Conread position: 1-275
Cow position:
Alignm length: 299
Alignm identity: 216
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 43, 293

Conread position: 1-277
Cow position:
Alignm length: 299
Alignm identity: 220
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 43, 291

Conread position: 1-286
Cow position:
Alignm length: 307
Alignm identity: 223
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 41, 290

Conread position: 1-286
Cow position:
Alignm length: 304
Alignm identity: 219
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 43, 287

Conread position: 1-426
Cow position:
Alignm length: 444
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 280

Conread position: 1-428
Cow position:
Alignm length: 444
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 105

Conread position: 1-428
Cow position:
Alignm length: 448
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 246

Conread position: 1-440
Cow position:
Alignm length: 472
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 397

Conread position: 1-441
Cow position:
Alignm length: 461
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 246

Conread position: 1-444
Cow position:
Alignm length: 456
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 179, 46

Conread position: 1-444
Cow position:
Alignm length: 470
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 25

Conread position: 1-449
Cow position:
Alignm length: 475
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 279

Conread position: 1-450
Cow position:
Alignm length: 487
Alignm identity: 329
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 43, 108

Conread position: 1-463
Cow position:
Alignm length: 486
Alignm identity: 320
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 29, 23

Conread position: 1-474
Cow position:
Alignm length: 501
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 271

Conread position: 1-475
Cow position:
Alignm length: 505
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 156

Conread position: 1-495
Cow position:
Alignm length: 515
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 211

Conread position: 1-523
Cow position:
Alignm length: 567
Alignm identity: 371
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 33, 405

Conread position: 1-530
Cow position:
Alignm length: 560
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 296

Conread position: 1-537
Cow position:
Alignm length: 565
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 276

Conread position: 1-538
Cow position:
Alignm length: 565
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 11

Conread position: 1-539
Cow position:
Alignm length: 569
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 287

Conread position: 1-541
Cow position:
Alignm length: 573
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 293

Conread position: 1-548
Cow position:
Alignm length: 572
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 159

Conread position: 1-558
Cow position:
Alignm length: 588
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 206

Conread position: 1-558
Cow position:
Alignm length: 580
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 210

Conread position: 1-558
Cow position:
Alignm length: 572
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 202

Conread position: 1-558
Cow position:
Alignm length: 596
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 398

Conread position: 1-559
Cow position:
Alignm length: 592
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 72

Conread position: 1-559
Cow position:
Alignm length: 583
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 17

Conread position: 1-559
Cow position:
Alignm length: 586
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 163

Conread position: 1-559
Cow position:
Alignm length: 593
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 293

Conread position: 1-559
Cow position:
Alignm length: 586
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 151

Conread position: 1-559
Cow position:
Alignm length: 591
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 276

Conread position: 1-585
Cow position:
Alignm length: 614
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 181

Conread position: 1-591
Cow position:
Alignm length: 618
Alignm identity: 446
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 30

Conread position: 1-591
Cow position:
Alignm length: 618
Alignm identity: 455
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 188

Conread position: 1-593
Cow position:
Alignm length: 617
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 226

Conread position: 1-593
Cow position:
Alignm length: 639
Alignm identity: 413
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 43, 198

Conread position: 1-593
Cow position:
Alignm length: 641
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 567

Conread position: 1-593
Cow position:
Alignm length: 643
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 0

Conread position: 1-593
Cow position:
Alignm length: 647
Alignm identity: 412
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 43, 76

Conread position: 2-159
Cow position:
Alignm length: 170
Alignm identity: 129
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 35, 0

Conread position: 2-275
Cow position:
Alignm length: 291
Alignm identity: 207
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 42, 109

Conread position: 2-427
Cow position:
Alignm length: 452
Alignm identity: 297
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 38, 273

Conread position: 2-441
Cow position:
Alignm length: 466
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 288

Conread position: 2-444
Cow position:
Alignm length: 469
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 288

Conread position: 2-450
Cow position:
Alignm length: 475
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 275

Conread position: 2-463
Cow position:
Alignm length: 489
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 243

Conread position: 2-489
Cow position:
Alignm length: 520
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 289

Conread position: 2-559
Cow position:
Alignm length: 590
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 275

Conread position: 2-559
Cow position:
Alignm length: 584
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 269

Conread position: 2-593
Cow position:
Alignm length: 649
Alignm identity: 419
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 42, 356

Conread position: 3-538
Cow position:
Alignm length: 555
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 237

Conread position: 3-556
Cow position:
Alignm length: 560
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 215, 36

Conread position: 3-562
Cow position:
Alignm length: 612
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 397

Conread position: 4-423
Cow position:
Alignm length: 439
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 12

Conread position: 4-449
Cow position:
Alignm length: 474
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 135

Conread position: 4-539
Cow position:
Alignm length: 556
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 62

Conread position: 4-556
Cow position:
Alignm length: 572
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 86

Conread position: 5-446
Cow position:
Alignm length: 458
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 81

Conread position: 7-445
Cow position:
Alignm length: 459
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 260

Conread position: 7-449
Cow position:
Alignm length: 456
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 99

Conread position: 7-449
Cow position:
Alignm length: 466
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 107

Conread position: 8-275
Cow position:
Alignm length: 285
Alignm identity: 201
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 36, 103

Conread position: 8-444
Cow position:
Alignm length: 473
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 321

Conread position: 8-558
Cow position:
Alignm length: 562
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 170

Conread position: 8-593
Cow position:
Alignm length: 644
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 335

Conread position: 15-508
Cow position:
Alignm length: 523
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 380

Conread position: 17-541
Cow position:
Alignm length: 538
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 29

Conread position: 41-223
Cow position:
Alignm length: 188
Alignm identity: 150
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 139, 58

Conread position: 42-489
Cow position:
Alignm length: 476
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 227

Conread position: 42-530
Cow position:
Alignm length: 504
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 194

Conread position: 43-454
Cow position:
Alignm length: 431
Alignm identity: 270
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 42, 62

Conread position: 55-539
Cow position:
Alignm length: 510
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 227

Conread position: 61-592
Cow position:
Alignm length: 551
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 60

Conread position: 66-556
Cow position:
Alignm length: 509
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 110

Conread position: 69-560
Cow position:
Alignm length: 516
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 222

Conread position: 69-591
Cow position:
Alignm length: 544
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 94

Conread position: 73-316
Cow position:
Alignm length: 261
Alignm identity: 183
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 26, 198

Conread position: 76-581
Cow position:
Alignm length: 522
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 303

Conread position: 78-552
Cow position:
Alignm length: 488
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 126

Conread position: 88-561
Cow position:
Alignm length: 489
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 172

Conread position: 108-494
Cow position:
Alignm length: 408
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 155

Conread position: 113-593
Cow position:
Alignm length: 492
Alignm identity: 317
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 36, 61

Conread position: 116-528
Cow position:
Alignm length: 427
Alignm identity: 285
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 64, 104

Conread position: 124-593
Cow position:
Alignm length: 489
Alignm identity: 318
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 42, 32

Conread position: 125-438
Cow position:
Alignm length: 328
Alignm identity: 228
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 56, 7

Conread position: 135-558
Cow position:
Alignm length: 438
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 245

Conread position: 154-449
Cow position:
Alignm length: 305
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 223

Conread position: 159-593
Cow position:
Alignm length: 443
Alignm identity: 288
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 105, 27

Conread position: 159-597
Cow position:
Alignm length: 444
Alignm identity: 279
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 153, 26

Conread position: 174-449
Cow position:
Alignm length: 285
Alignm identity: 204
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 22, 94

Conread position: 182-591
Cow position:
Alignm length: 420
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 92

Conread position: 217-587
Cow position:
Alignm length: 384
Alignm identity: 260
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 14, 156

Conread position: 266-592
Cow position:
Alignm length: 334
Alignm identity: 225
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 48, 5

Conread position: 271-587
Cow position:
Alignm length: 324
Alignm identity: 215
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 43, 96

Conread position: 271-593
Cow position:
Alignm length: 330
Alignm identity: 219
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 41, 97

Conread position: 271-593
Cow position:
Alignm length: 330
Alignm identity: 218
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 43, 81

Conread position: 271-593
Cow position:
Alignm length: 330
Alignm identity: 222
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 43, 92

Conread position: 280-444
Cow position:
Alignm length: 169
Alignm identity: 123
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 33, 56

Conread position: 296-593
Cow position:
Alignm length: 305
Alignm identity: 213
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 18, 57

Conread position: 324-593
Cow position:
Alignm length: 273
Alignm identity: 183
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 120, 40

Show alignments to all cow chromosomes.